Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ILE
DownloadVisualize
BU of 1ile by Molmil
ISOLEUCYL-TRNA SYNTHETASE
分子名称: ISOLEUCYL-TRNA SYNTHETASE, ZINC ION
著者Nureki, O, Vassylyev, D.G, Tateno, M, Shimada, A, Nakama, T, Fukai, S, Konno, M, Schimmel, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-02-24
公開日1999-04-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Enzyme structure with two catalytic sites for double-sieve selection of substrate.
Science, 280, 1998
1GLN
DownloadVisualize
BU of 1gln by Molmil
ARCHITECTURES OF CLASS-DEFINING AND SPECIFIC DOMAINS OF GLUTAMYL-TRNA SYNTHETASE
分子名称: GLUTAMYL-TRNA SYNTHETASE
著者Nureki, O, Vassylyev, D.G, Katayanagi, K, Shimizu, T, Sekine, S, Kigawa, T, Miyazawa, T, Yokoyama, S, Morikawa, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1994-07-20
公開日1995-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Architectures of class-defining and specific domains of glutamyl-tRNA synthetase.
Science, 267, 1995
1FL0
DownloadVisualize
BU of 1fl0 by Molmil
CRYSTAL STRUCTURE OF THE EMAP2/RNA-BINDING DOMAIN OF THE P43 PROTEIN FROM HUMAN AMINOACYL-TRNA SYNTHETASE COMPLEX
分子名称: ENDOTHELIAL-MONOCYTE ACTIVATING POLYPEPTIDE II
著者Renault, L, Kerjan, P, Pasqualato, S, Menetrey, J, Robinson, J.-C, Kawaguchi, S, Vassylyev, D.G, Yokoyama, S, Mirande, M, Cherfils, J.
登録日2000-08-11
公開日2000-12-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the EMAPII domain of human aminoacyl-tRNA synthetase complex reveals evolutionary dimer mimicry.
EMBO J., 20, 2001
1GAX
DownloadVisualize
BU of 1gax by Molmil
CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE
分子名称: N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONE, TRNA(VAL), VALYL-TRNA SYNTHETASE, ...
著者Fukai, S, Nureki, O, Sekine, S, Shimada, A, Tao, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-06-23
公開日2000-12-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase.
Cell(Cambridge,Mass.), 103, 2000
1G59
DownloadVisualize
BU of 1g59 by Molmil
GLUTAMYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(GLU).
分子名称: GLUTAMYL-TRNA SYNTHETASE, TRNA(GLU)
著者Sekine, S, Nureki, O, Shimada, A, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-10-31
公開日2001-09-01
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for anticodon recognition by discriminating glutamyl-tRNA synthetase.
Nat.Struct.Biol., 8, 2001
1GD7
DownloadVisualize
BU of 1gd7 by Molmil
CRYSTAL STRUCTURE OF A BIFUNCTIONAL PROTEIN (CSAA) WITH EXPORT-RELATED CHAPERONE AND TRNA-BINDING ACTIVITIES.
分子名称: CSAA PROTEIN
著者Shibata, T, Inoue, Y, Vassylyev, D.G, Kawaguchi, S, Yokoyama, S, Muller, J, Linde, D, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-09-22
公開日2001-09-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.
EMBO J., 20, 2001
2DQU
DownloadVisualize
BU of 2dqu by Molmil
Crystal form II: high resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog
分子名称: IMMUNOGLOBULIN 6D9, [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER
著者Kristensen, O, Vassylyev, D.G, Tanaka, F, Ito, N, Morikawa, K, Fujii, I.
登録日2006-05-30
公開日2006-06-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
2DQT
DownloadVisualize
BU of 2dqt by Molmil
High resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog
分子名称: IMMUNOGLOBULIN 6D9, [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER
著者Kristensen, O, Vassylyev, D.G, Tanaka, F, Ito, N, Morikawa, K, Fujii, I.
登録日2006-05-30
公開日2006-06-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
1IW7
DownloadVisualize
BU of 1iw7 by Molmil
Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution
分子名称: LEAD (II) ION, MAGNESIUM ION, RNA polymerase alpha subunit, ...
著者RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-04-22
公開日2002-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution
NATURE, 417, 2002
3AQO
DownloadVisualize
BU of 3aqo by Molmil
Structure and function of a membrane component SecDF that enhances protein export
分子名称: Probable SecDF protein-export membrane protein
著者Echizen, Y, Tsukazaki, T, Ishitani, R, Nureki, O.
登録日2010-11-16
公開日2011-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of a membrane component SecDF that enhances protein export.
Nature, 474, 2011
1POT
DownloadVisualize
BU of 1pot by Molmil
SPERMIDINE/PUTRESCINE-BINDING PROTEIN COMPLEXED WITH SPERMIDINE (MONOMER FORM)
分子名称: SPERMIDINE, SPERMIDINE/PUTRESCINE-BINDING PROTEIN
著者Sugiyama, S, Maenaka, K, Matsushima, M, Morikawa, K.
登録日1996-02-02
公開日1996-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.8-A X-ray structure of the Escherichia coli PotD protein complexed with spermidine and the mechanism of polyamine binding.
Protein Sci., 5, 1996
5TMC
DownloadVisualize
BU of 5tmc by Molmil
Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Wang, J.
登録日2016-10-12
公開日2016-11-23
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献On the validation of crystallographic symmetry and the quality of structures.
Protein Sci., 24, 2015
3EL3
DownloadVisualize
BU of 3el3 by Molmil
Distinct Monooxygenase and Farnesene Synthase Active Sites in Cytochrome P450 170A1
分子名称: (3S,3aR,6S)-3,7,7,8-tetramethyl-2,3,4,5,6,7-hexahydro-1H-3a,6-methanoazulene, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450
著者Zhao, B, Waterman, M.R.
登録日2008-09-19
公開日2009-09-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of albaflavenone monooxygenase containing a moonlighting terpene synthase active site
J.Biol.Chem., 284, 2009
2ZQP
DownloadVisualize
BU of 2zqp by Molmil
Crystal Structure of SecYE translocon from Thermus thermophilus
分子名称: Preprotein translocase SecE subunit, Preprotein translocase SecY subunit
著者Tsukazaki, T, Nureki, O.
登録日2008-08-14
公開日2008-10-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Conformational transition of Sec machinery inferred from bacterial SecYE structures
Nature, 455, 2008
2RRN
DownloadVisualize
BU of 2rrn by Molmil
Solution structure of SecDF periplasmic domain P4
分子名称: Probable SecDF protein-export membrane protein
著者Tanaka, T, Tsukazaki, T, Echizen, Y, Nureki, O, Kohno, T.
登録日2011-01-30
公開日2011-05-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and function of a membrane component SecDF that enhances protein export
Nature, 474, 2011
1E7Z
DownloadVisualize
BU of 1e7z by Molmil
Crystal structure of the EMAP2/RNA binding domain of the p43 protein from human aminoacyl-tRNA synthetase complex
分子名称: ENDOTHELIAL-MONOCYTE ACTIVATING POLYPEPTIDE II, MERCURY (II) ION
著者Pasqualato, S, Kerjan, P, Renault, L, Menetrey, J, Mirande, M, Cherfils, J.
登録日2000-09-13
公開日2000-11-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the Emapii Domain of Human Aminoacyl-tRNA Synthetase Complex Reveals Evolutionary Dimeric Mimicry
Embo J., 20, 2001
1TPL
DownloadVisualize
BU of 1tpl by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF TYROSINE PHENOL-LYASE
分子名称: SULFATE ION, TYROSINE PHENOL-LYASE
著者Antson, A, Demidkina, T, Dauter, Z, Harutyunyan, E, Wilson, K.
登録日1992-11-25
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Three-dimensional structure of tyrosine phenol-lyase.
Biochemistry, 32, 1993
2DTM
DownloadVisualize
BU of 2dtm by Molmil
Thermodynamic and structural analyses of hydrolytic mechanism by catalytic antibodies
分子名称: IMMUNOGLOBULIN 6D9
著者Oda, M, Ito, N, Tsumuraya, T, Suzuki, K, Fujii, I.
登録日2006-07-13
公開日2007-05-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
1J1D
DownloadVisualize
BU of 1j1d by Molmil
Crystal structure of the 46kDa domain of human cardiac troponin in the Ca2+ saturated form
分子名称: CALCIUM ION, Troponin C, Troponin I, ...
著者Takeda, S, Yamashita, A, Maeda, K, Maeda, Y.
登録日2002-12-03
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure of the core domain of human cardiac troponin in the Ca2+-saturated form
Nature, 424, 2003
1J1E
DownloadVisualize
BU of 1j1e by Molmil
Crystal structure of the 52kDa domain of human cardiac troponin in the Ca2+ saturated form
分子名称: CALCIUM ION, Troponin C, Troponin I, ...
著者Takeda, S, Yamashita, A, Maeda, K, Maeda, Y.
登録日2002-12-03
公開日2003-07-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the core domain of human cardiac troponin in the Ca2+-saturated form
Nature, 424, 2003
1RCK
DownloadVisualize
BU of 1rck by Molmil
THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
分子名称: RIBONUCLEASE F1
著者Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
登録日1994-08-08
公開日1994-11-30
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992
1RCL
DownloadVisualize
BU of 1rcl by Molmil
THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
分子名称: RIBONUCLEASE F1
著者Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
登録日1994-08-08
公開日1994-11-30
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992
2AT9
DownloadVisualize
BU of 2at9 by Molmil
STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM BY ELECTRON CRYSTALLOGRAPHY
分子名称: 3-[[3-METHYLPHOSPHONO-GLYCEROLYL]PHOSPHONYL]-[1,2-DI[2,6,10,14-TETRAMETHYL-HEXADECAN-16-YL]GLYCEROL, BACTERIORHODOPSIN, RETINAL
著者Mitsuoka, K, Hirai, T, Murata, K, Miyazawa, A, Kidera, A, Kimura, Y, Fujiyoshi, Y.
登録日1998-12-17
公開日1999-04-27
最終更新日2024-10-23
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution.
J.Mol.Biol., 286, 1999
<123

 

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon