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1WZU
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BU of 1wzu by Molmil
Crystal structure of quinolinate synthase (nadA)
分子名称: D-MALATE, Quinolinate synthetase A
著者Sakuraba, H.
登録日2005-03-09
公開日2005-06-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the NAD Biosynthetic Enzyme Quinolinate Synthase
J.Biol.Chem., 280, 2005
1X0K
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BU of 1x0k by Molmil
Crystal Structure of Bacteriorhodopsin at pH 10
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
著者Okumura, H, Murakami, M, Kouyama, T.
登録日2005-03-23
公開日2005-08-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
3B1J
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BU of 3b1j by Molmil
Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus
分子名称: COPPER (II) ION, CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), ...
著者Matsumura, H, Kai, A, Inoue, T.
登録日2011-07-04
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B1K
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BU of 3b1k by Molmil
Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the absence of copper from Synechococcus elongatus
分子名称: CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Matsumura, H, Kai, A, Inoue, T.
登録日2011-07-04
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.302 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B20
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BU of 3b20 by Molmil
Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with NADfrom Synechococcus elongatus"
分子名称: Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Matsumura, H, Kai, A, Maeda, T, Inoue, T.
登録日2011-07-17
公開日2012-01-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
2ZC0
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BU of 2zc0 by Molmil
Crystal structure of an archaeal alanine:glyoxylate aminotransferase
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Alanine glyoxylate transaminase, IMIDAZOLE, ...
著者Sakuraba, H, Yoneda, K, Tsuge, H, Ohshima, T.
登録日2007-10-31
公開日2008-06-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of an archaeal alanine:glyoxylate aminotransferase
Acta Crystallogr.,Sect.D, 64, 2008
3AXM
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BU of 3axm by Molmil
Structure of rice Rubisco in complex with 6PG
分子名称: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
著者Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
登録日2011-04-11
公開日2012-04-11
最終更新日2013-06-05
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
3AXK
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BU of 3axk by Molmil
Structure of rice Rubisco in complex with NADP(H)
分子名称: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
登録日2011-04-11
公開日2012-04-11
最終更新日2013-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
3AXB
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BU of 3axb by Molmil
Structure of a dye-linked L-proline dehydrogenase from the aerobic hyperthermophilic archaeon, Aeropyrum pernix
分子名称: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, PROLINE, ...
著者Sakuraba, H, Ohshima, T, Satomura, T, Yoneda, K, Hara, Y.
登録日2011-04-01
公開日2012-04-04
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal Structure of Novel Dye-linked L-Proline Dehydrogenase from Hyperthermophilic Archaeon Aeropyrum pernix
J.Biol.Chem., 287, 2012
3A9H
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BU of 3a9h by Molmil
Crystal Structure of PQQ-dependent sugar dehydrogenase holo-form
分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, Putative uncharacterized protein, ...
著者Sakuraba, H, Yokono, K, Yoneda, K, Ohshima, T.
登録日2009-10-26
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Catalytic properties and crystal structure of quinoprotein aldose sugar dehydrogenase from hyperthermophilic archaeon Pyrobaculum aerophilum
Arch.Biochem.Biophys., 502, 2010
2ZVR
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BU of 2zvr by Molmil
Crystal structure of a D-tagatose 3-epimerase-related protein from Thermotoga maritima
分子名称: Uncharacterized protein TM_0416
著者Sakuraba, H, Ohshima, T.
登録日2008-11-14
公開日2009-03-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a D-tagatose 3-epimerase-related protein from the hyperthermophilic bacterium Thermotoga maritima
Acta Crystallogr.,Sect.F, 65, 2009
3A9G
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BU of 3a9g by Molmil
Crystal Structure of PQQ-dependent sugar dehydrogenase apo-form
分子名称: CALCIUM ION, Putative uncharacterized protein, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Sakuraba, H, Yokono, K, Yoneda, K, Ohshima, T.
登録日2009-10-26
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Catalytic properties and crystal structure of quinoprotein aldose sugar dehydrogenase from hyperthermophilic archaeon Pyrobaculum aerophilum
Arch.Biochem.Biophys., 502, 2010
2DSN
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BU of 2dsn by Molmil
Crystal structure of T1 lipase
分子名称: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
著者Matsumura, H, Kai, Y.
登録日2006-07-03
公開日2007-07-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase
Proteins, 70, 2007
2Z5G
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BU of 2z5g by Molmil
Crystal structure of T1 lipase F16L mutant
分子名称: CALCIUM ION, CHLORIDE ION, Thermostable lipase, ...
著者Matsumura, H, Yamamoto, T, Inoue, T, Kai, Y.
登録日2007-07-08
公開日2007-10-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase
Proteins, 70, 2007
3A74
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BU of 3a74 by Molmil
Lysyl-tRNA synthetase from Bacillus stearothermophilus complexed with Diadenosine Tetraphosphate (AP4A)
分子名称: 2,6-DIAMINO-HEXANOIC ACID AMIDE, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Lysyl-tRNA synthetase, ...
著者Sakurama, H, Takita, T, Mikami, B, Itoh, T, Yasukawa, K, Inouye, K.
登録日2009-09-13
公開日2010-09-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Lysyl-tRNA Synthetase from Bacillus stearothermophilus in Complex with Diadenosine Tetraphosphate (AP4A): Insights into AP4A Synthesis Mechanisms and Implication for Recognition of Discriminator Base of tRNA^Lys
To be Published
3AW9
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BU of 3aw9 by Molmil
Structure of UDP-galactose 4-epimerase mutant
分子名称: GALACTOSE-URIDINE-5'-DIPHOSPHATE, NAD-dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Sakuraba, H, Kawai, T, Yoneda, K, Ohshima, T.
登録日2011-03-15
公開日2012-02-29
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of UDP-galactose 4-epimerase mutant
To be Published
3AW5
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BU of 3aw5 by Molmil
Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum
分子名称: ACETATE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Sakuraba, H, Ohshima, T, Yoneda, K.
登録日2011-03-10
公開日2011-06-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum
Acta Crystallogr.,Sect.F, 67, 2011
5WYF
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BU of 5wyf by Molmil
Structure of amino acid racemase, 2.12 A
分子名称: CADMIUM ION, Isoleucine 2-epimerase, N-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2017-01-12
公開日2017-04-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
3VNS
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BU of 3vns by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with D-valine and AMP from streptomyces
分子名称: ADENOSINE MONOPHOSPHATE, D-VALINE, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
to be published
3VNQ
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BU of 3vnq by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with ATP from streptomyces
分子名称: ADENOSINE-5'-TRIPHOSPHATE, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
To be Published
3VNR
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BU of 3vnr by Molmil
Co-crystal structure of NRPS adenylation protein CytC1 with aminobutyric acid and AMP from streptomyces
分子名称: ADENOSINE MONOPHOSPHATE, ALPHA-AMINOBUTYRIC ACID, NRPS adenylation protein CytC1
著者Okumura, H, Ueki, M, Shiro, Y, Osada, H.
登録日2012-01-17
公開日2013-01-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate recognition mechanism of NRPS adenylation protein from Streptomyces
To be Published
8J1C
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BU of 8j1c by Molmil
Structure of amino acid dehydrogenase in complex with NADP
分子名称: 1,2-ETHANEDIOL, IMIDAZOLE, LYSINE, ...
著者Sakuraba, H, Ohshima, T.
登録日2023-04-12
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family.
Int.J.Biol.Macromol., 249, 2023
8J1G
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BU of 8j1g by Molmil
Structure of amino acid dehydrogenase in complex with NADPH
分子名称: 1,2-ETHANEDIOL, ARGININE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Sakuraba, H, Ohshima, T.
登録日2023-04-12
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family.
Int.J.Biol.Macromol., 249, 2023
6K3D
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BU of 6k3d by Molmil
Structure of multicopper oxidase mutant
分子名称: COPPER (II) ION, CU-O-CU LINKAGE, Multicopper oxidase
著者Sakuraba, H, Ohshida, T, Satomura, T, Yoneda, K, Ohshima, T.
登録日2019-05-17
公開日2020-05-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.919 Å)
主引用文献Activity enhancement of multicopper oxidase from a hyperthermophile via directed evolution, and its application as the element of a high performance biocathode.
J.Biotechnol., 325, 2021
5B3F
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BU of 5b3f by Molmil
Crystal structure of phosphoribulokinase from Methanospirillum hungatei
分子名称: Phosphoribulokinase/uridine kinase, SULFATE ION
著者Matsumura, H, Ashida, H.
登録日2016-02-22
公開日2017-01-18
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A RuBisCO-mediated carbon metabolic pathway in methanogenic archaea
Nat Commun, 8, 2017

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