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5Y0O
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BU of 5y0o by Molmil
Crystal structure of apo BsTmcAL
分子名称: UPF0348 protein B4417_3650
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0T
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BU of 5y0t by Molmil
Crystal structure of Thermotoga maritima TmcAL bound with alpha-thio ATP(Form II)
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, PENTAETHYLENE GLYCOL, ...
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
6IW6
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BU of 6iw6 by Molmil
Crystal structure of the Lin28-interacting module of human TUT4
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Terminal uridylyltransferase 4,Terminal uridylyltransferase 4, ...
著者Yamashita, S, Tomita, K.
登録日2018-12-04
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Crystal structure of the Lin28-interacting module of human terminal uridylyltransferase that regulates let-7 expression.
Nat Commun, 10, 2019
5WU5
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BU of 5wu5 by Molmil
Crystal structure of apo human Tut1, form III
分子名称: Speckle targeted PIP5K1A-regulated poly(A) polymerase
著者Yamashita, S, Tomita, K.
登録日2016-12-16
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.404 Å)
主引用文献Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat Commun, 8, 2017
5WU2
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BU of 5wu2 by Molmil
Crystal structure of human Tut1 bound with BaUTP, form I
分子名称: BARIUM ION, CHLORIDE ION, Speckle targeted PIP5K1A-regulated poly(A) polymerase, ...
著者Yamashita, S, Tomita, K.
登録日2016-12-16
公開日2017-05-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat Commun, 8, 2017
5WU6
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BU of 5wu6 by Molmil
Crystal structure of apo human Tut1, form IV
分子名称: MAGNESIUM ION, Speckle targeted PIP5K1A-regulated poly(A) polymerase
著者Yamashita, S, Tomita, K.
登録日2016-12-16
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.209 Å)
主引用文献Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat Commun, 8, 2017
5WU4
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BU of 5wu4 by Molmil
Crystal structure of human Tut1 bound with MgATP, form II
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Yamashita, S, Tomita, K.
登録日2016-12-16
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat Commun, 8, 2017
5WU3
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BU of 5wu3 by Molmil
Crystal structure of human Tut1 bound with MgUTP, form II
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Yamashita, S, Tomita, K.
登録日2016-12-16
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat Commun, 8, 2017
5WU1
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BU of 5wu1 by Molmil
Crystal structure of apo human Tut1, form I
分子名称: CHLORIDE ION, Speckle targeted PIP5K1A-regulated poly(A) polymerase
著者Yamashita, S, Tomita, K.
登録日2016-12-16
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat Commun, 8, 2017
3VNV
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BU of 3vnv by Molmil
Complex structure of viral RNA polymerase II
分子名称: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
著者Takeshita, D, Tomita, K.
登録日2012-01-18
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
3VNU
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BU of 3vnu by Molmil
Complex structure of viral RNA polymerase I
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
著者Takeshita, D, Tomita, K.
登録日2012-01-18
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
3WFR
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BU of 3wfr by Molmil
tRNA processing enzyme complex 2
分子名称: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.501 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3WFO
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BU of 3wfo by Molmil
tRNA processing enzyme (apo form 1)
分子名称: Poly A polymerase, SULFATE ION
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3WFP
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BU of 3wfp by Molmil
tRNA processing enzyme (apo form 2)
分子名称: Poly A polymerase, SULFATE ION
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (4.005 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3WFS
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BU of 3wfs by Molmil
tRNA processing enzyme complex 3
分子名称: Poly A polymerase, RNA (74-MER), SULFATE ION
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.311 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3WFQ
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BU of 3wfq by Molmil
tRNA processing enzyme complex 1
分子名称: Poly A polymerase, RNA (73-MER)
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.619 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
2Z3K
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BU of 2z3k by Molmil
complex structure of LF-transferase and rAF
分子名称: 2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, ...
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3M
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BU of 2z3m by Molmil
complex structure of LF-transferase and dAF
分子名称: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, ...
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3L
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BU of 2z3l by Molmil
complex structure of LF-transferase and peptide A
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, peptide (PHE)(ARG)(TYR)(LEU)(GLY)
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3P
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BU of 2z3p by Molmil
complex structure of LF-transferase and leucine
分子名称: D(-)-TARTARIC ACID, LEUCINE, Leucyl/phenylalanyl-tRNA-protein transferase
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3O
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BU of 2z3o by Molmil
complex structure of LF-transferase and phenylalanine
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, PHENYLALANINE
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z3N
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BU of 2z3n by Molmil
complex structure of LF-transferase and peptide B
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, peptide (PHE)(ARG)(TYR)(LEU)(GLY)
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
3AQK
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BU of 3aqk by Molmil
Structure of bacterial protein (apo form I)
分子名称: Poly(A) polymerase
著者Toh, Y, Takeshita, D, Tomita , K.
登録日2010-11-09
公開日2011-02-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011
3AQN
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BU of 3aqn by Molmil
Complex structure of bacterial protein (apo form II)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) polymerase
著者Toh, Y, Takeshita, D, Tomita , K.
登録日2010-11-09
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011
3AQL
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BU of 3aql by Molmil
Structure of bacterial protein (apo form II)
分子名称: GLYCEROL, MAGNESIUM ION, Poly(A) polymerase
著者Toh, Y, Takeshita, D, Tomita , K.
登録日2010-11-09
公開日2011-02-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011

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