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8VD8
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BU of 8vd8 by Molmil
SaPI1 portal structure in mature capsids containing DNA
分子名称: Connector, Portal protein
著者Kizziah, J.L, Mukherjee, A, Dokland, T.
登録日2023-12-14
公開日2024-01-10
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VDC
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BU of 8vdc by Molmil
SaPI1 portal structure in mature capsids without DNA
分子名称: Connector, Portal protein
著者Mukherjee, A, Kizziah, J.L, Dokland, T.
登録日2023-12-14
公開日2024-01-10
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VDE
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BU of 8vde by Molmil
SaPI1 portal-capsid interface in mature capsids with DNA
分子名称: Major capsid protein, Portal protein
著者Kizziah, J.L, Mukherjee, A, Dokland, T.
登録日2023-12-14
公開日2024-01-10
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD4
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BU of 8vd4 by Molmil
SaPI1 mature capsid structure containing DNA
分子名称: Major head protein
著者Mukherjee, A, Kizziah, J.L, Dokland, T.
登録日2023-12-14
公開日2024-01-10
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD5
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BU of 8vd5 by Molmil
SaPI1 mature capsid structure without DNA
分子名称: Major capsid protein
著者Mukherjee, A, Kizziah, J.L, Dokland, T.
登録日2023-12-14
公開日2024-01-10
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8V8B
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BU of 8v8b by Molmil
Structure of 80alpha portal protein expressed in E. coli
分子名称: Portal protein
著者Kizziah, J.L, Mukherjee, A, Dokland, T.
登録日2023-12-05
公開日2024-01-10
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
6EID
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BU of 6eid by Molmil
Crystal structure of wild-type Channelrhodopsin 2
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2, PHOSPHATE ION, ...
著者Borshchevskiy, V, Kovalev, K, Volkov, O, Polovinkin, V, Marin, E, Balandin, T, Astashkin, R, Bamann, C, Bueldt, G, Willlbold, D, Popov, A, Bamberg, E, Gordeliy, V.
登録日2017-09-19
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural insights into ion conduction by channelrhodopsin 2.
Science, 358, 2017
7A5O
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BU of 7a5o by Molmil
Human MUC2 AAs 21-1397
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D.
登録日2020-08-21
公開日2020-10-21
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Assembly Mechanism of Mucin and von Willebrand Factor Polymers.
Cell, 183, 2020
6V8I
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BU of 6v8i by Molmil
Composite atomic model of the Staphylococcus aureus phage 80alpha baseplate
分子名称: Distal Tail Protein, gp58, FE (III) ION, ...
著者Kizziah, J.L, Dokland, T.
登録日2019-12-11
公開日2020-03-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the host cell recognition and penetration machinery of a Staphylococcus aureus bacteriophage.
Plos Pathog., 16, 2020
5LN1
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BU of 5ln1 by Molmil
STRUCTURE OF UBIQUITYLATED-RPN10 FROM YEAST;
分子名称: 26S proteasome regulatory subunit RPN10, Polyubiquitin-B
著者Keren-Kaplan, T, Attali, I, Levin-Kravets, O, Prag, G.
登録日2016-08-02
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Structure of ubiquitylated-Rpn10 provides insight into its autoregulation mechanism.
Nat Commun, 7, 2016
6EIG
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BU of 6eig by Molmil
Crystal structure of N24Q/C128T mutant of Channelrhodopsin 2
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2, EICOSANE, ...
著者Kovalev, K, Borshchevskiy, V, Volkov, O, Polovinkin, V, Marin, E, Balandin, T, Astashkin, R, Bamann, C, Bueldt, G, Willlbold, D, Popov, A, Bamberg, E, Gordeliy, V.
登録日2017-09-19
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into ion conduction by channelrhodopsin 2.
Science, 358, 2017
8TA4
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BU of 8ta4 by Molmil
Cryo-EM structure of the human CLC-2 chloride channel transmembrane domain with symmetric C-terminal
分子名称: CHLORIDE ION, Chloride channel protein 2
著者Xu, M, Neelands, T, Powers, A.S, Liu, Y, Miller, S, Pintilie, G, Du Bois, J, Dror, R.O, Chiu, W, Maduke, M.
登録日2023-06-26
公開日2024-01-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism.
Elife, 12, 2024
8TA5
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BU of 8ta5 by Molmil
Title: Cryo-EM structure of the human CLC-2 chloride channel transmembrane domain with asymmetric C-terminal
分子名称: Chloride channel protein 2
著者Xu, M, Neelands, T, Powers, A.S, Liu, Y, Miller, S, Pintilie, G, Du Bois, J, Dror, R.O, Chiu, W, Maduke, M.
登録日2023-06-26
公開日2024-01-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism.
Elife, 12, 2024
6TKK
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BU of 6tkk by Molmil
Neuropilin 1-b1 domain in a complex with the C-terminal VEGFB186 peptide
分子名称: 1,2-ETHANEDIOL, ACE-ARG-PRO-GLN-PRO-ARG, Neuropilin-1
著者Eldrid, C, Yu, L, Yelland, T, Fotinou, C, Djordjevic, S.
登録日2019-11-28
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Neuropilin 1-b1 domain in a complex with the C-terminal VEGFB186 peptide
To Be Published
6TM2
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BU of 6tm2 by Molmil
Human MUC2 AAs 21-1397
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D.
登録日2019-12-03
公開日2020-10-21
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Assembly Mechanism of Mucin and von Willebrand Factor Polymers.
Cell, 183, 2020
6S8W
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BU of 6s8w by Molmil
Aromatic aminotransferase AroH (Aro8) form Aspergillus fumigatus in complex with PLP (internal aldimine)
分子名称: Aromatic aminotransferase Aro8, putative, FORMIC ACID, ...
著者Giardina, G, Mirco, D, Spizzichino, S, Zelante, T, Cutruzzola, F, Romani, L, Cellini, B.
登録日2019-07-10
公開日2020-08-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Aspergillus fumigatus AroH, an aromatic amino acid aminotransferase
Proteins, 2021
7BNT
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BU of 7bnt by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with a predicted ancestral HMA domain of Pik-1 from Oryza spp.
分子名称: 1,2-ETHANEDIOL, AVR-Pik protein, Predicted ancestral HMA domain of Pik-1 from Oryza spp.
著者Bialas, A, Langner, T, Harant, A, Contreras, M.P, Stevenson, C.E.M, Lawson, D.M, Sklenar, J, Kellner, R, Moscou, M.J, Terauchi, R, Banfield, M.J, Kamoun, S.
登録日2021-01-22
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Two NLR immune receptors acquired high-affinity binding to a fungal effector through convergent evolution of their integrated domain.
Elife, 10, 2021
6G7I
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BU of 6g7i by Molmil
Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 49-406 fs state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, ...
著者Nogly, P, Weinert, T, James, D, Cabajo, S, Ozerov, D, Furrer, A, Gashi, D, Borin, V, Skopintsev, P, Jaeger, K, Nass, K, Bath, P, Bosman, R, Koglin, J, Seaberg, M, Lane, T, Kekilli, D, Bruenle, S, Tanaka, T, Wu, W, Milne, C, White, T, Barty, A, Weierstall, U, Panneels, V, Nango, E, Iwata, S, Hunter, M, Schapiro, I, Schertler, G, Neutze, R, Standfuss, J.
登録日2018-04-06
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Science, 361, 2018
6G7K
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BU of 6g7k by Molmil
Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 10 ps state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, ...
著者Nogly, P, Weinert, T, James, D, Cabajo, S, Ozerov, D, Furrer, A, Gashi, D, Borin, V, Skopintsev, P, Jaeger, K, Nass, K, Bath, P, Bosman, R, Koglin, J, Seaberg, M, Lane, T, Kekilli, D, Bruenle, S, Tanaka, T, Wu, W, Milne, C, White, T, Barty, A, Weierstall, U, Panneels, V, Nango, E, Iwata, S, Hunter, M, Schapiro, I, Schertler, G, Neutze, R, Standfuss, J.
登録日2018-04-06
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Science, 361, 2018
2I9F
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BU of 2i9f by Molmil
Structure of the equine arterivirus nucleocapsid protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ...
著者Deshpande, A, Wang, S, Walsh, M, Dokland, T.
登録日2006-09-05
公開日2007-05-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the equine arteritis virus nucleocapsid protein reveals a dimer-dimer arrangement.
Acta Crystallogr.,Sect.D, 63, 2007
2J14
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BU of 2j14 by Molmil
3,4,5-Trisubstituted Isoxazoles as Novel PPARdelta Agonists: Part2
分子名称: (3-{4-[2-(2,4-DICHLORO-PHENOXY)-ETHYLCARBAMOYL]-5-PHENYL-ISOXAZOL-3-YL}-PHENYL)-ACETIC ACID, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR DELTA
著者Epple, R, Azimioara, M, Russo, R, Xie, Y, Wang, X, Cow, C, Wityak, J, Karanewsky, D, Bursulaya, B, Kreusch, A, Tuntland, T, Gerken, A, Iskandar, M, Saez, E, Seidel, H.M, Tian, S.S.
登録日2006-08-08
公開日2006-09-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献3,4,5-Trisubstituted Isoxazoles as Novel Ppardelta Agonists. Part 2
Bioorg.Med.Chem.Lett., 16, 2006
6B23
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BU of 6b23 by Molmil
Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid
分子名称: Capsid morphogenesis B protein, Major head protein
著者Kizziah, J.L, Dearborn, A.D, Dokland, T.
登録日2017-09-19
公開日2017-10-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
6G7J
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BU of 6g7j by Molmil
Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 457-646 fs state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, ...
著者Nogly, P, Weinert, T, James, D, Cabajo, S, Ozerov, D, Furrer, A, Gashi, D, Borin, V, Skopintsev, P, Jaeger, K, Nass, K, Bath, P, Bosman, R, Koglin, J, Seaberg, M, Lane, T, Kekilli, D, Bruenle, S, Tanaka, T, Wu, W, Milne, C, White, T, Barty, A, Weierstall, U, Panneels, V, Nango, E, Iwata, S, Hunter, M, Schapiro, I, Schertler, G, Neutze, R, Standfuss, J.
登録日2018-04-06
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Science, 361, 2018
6B0X
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BU of 6b0x by Molmil
Capsid protein and C-terminal part of scaffolding protein in the Staphylococcus aureus phage 80alpha procapsid
分子名称: Major head protein, Scaffold protein
著者Kizziah, J.L, Dearborn, A.D, Dokland, T.
登録日2017-09-15
公開日2017-10-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
5IJR
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BU of 5ijr by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-1 ligand.
分子名称: DIMETHYL SULFOXIDE, L-HOMOARGININE, Neuropilin-1
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-03-02
公開日2017-03-29
最終更新日2018-07-11
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018

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件を2024-08-07に公開中

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