Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6TK7
DownloadVisualize
BU of 6tk7 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: Dark structure in acidic conditions
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
6TK5
DownloadVisualize
BU of 6tk5 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 800fs+2ps structure of KR2 with extrapolated, light and dark datasets
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
6TK4
DownloadVisualize
BU of 6tk4 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 1ns+16ns structure of KR2 with extrapolated, light and dark datasets
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
6TK6
DownloadVisualize
BU of 6tk6 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: Dark structure in neutral conditions with attached light datasets at 800fs, 2ps, 100ps, 1ns, 16ns, 1us, 30us, 150us, 1ms and 20ms
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
6TK3
DownloadVisualize
BU of 6tk3 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 30us+150us structure of KR2 with extrapolated, light and dark datasets
分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
6TK2
DownloadVisualize
BU of 6tk2 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 1ms structure of KR2 with extrapolated, light and dark datasets
分子名称: EICOSANE, RETINAL, SODIUM ION, ...
著者Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
登録日2019-11-28
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
5YKL
DownloadVisualize
BU of 5ykl by Molmil
Antimicrobial peptide AY1C designed from the skin secretion of Chinese Odorous frogs
分子名称: designed AY1C
著者Pal, I, Atreya, H.S, Bhunia, A.
登録日2017-10-15
公開日2017-10-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.
Sci Rep, 9, 2019
5YKQ
DownloadVisualize
BU of 5ykq by Molmil
Designed peptide CAY1 from Odorrana andersonii skin secretion
分子名称: designed CAY1
著者Pal, I, Atreya, H.S, Bhunia, A.
登録日2017-10-15
公開日2017-11-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.
Sci Rep, 9, 2019
5YKK
DownloadVisualize
BU of 5ykk by Molmil
Antimicrobial peptide Andersonin-Y1 (AY1)
分子名称: Andersonin-Y1 (AY1)
著者Pal, I, Atreya, H.S, Bhunia, A.
登録日2017-10-15
公開日2017-11-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.
Sci Rep, 9, 2019
2LQ1
DownloadVisualize
BU of 2lq1 by Molmil
Solution structure of de novo designed antifreeze peptide 3
分子名称: de novo designed antifreeze peptide 3
著者Bhunia, A.
登録日2012-02-21
公開日2012-10-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structures, dynamics, and ice growth inhibitory activity of Peptide fragments derived from an antarctic yeast protein
Plos One, 7, 2012
2LQ0
DownloadVisualize
BU of 2lq0 by Molmil
Solution structure of de novo designed antifreeze peptide 1m
分子名称: de novo designed antifreeze peptide 1m
著者Bhunia, A.
登録日2012-02-21
公開日2012-10-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures, dynamics, and ice growth inhibitory activity of Peptide fragments derived from an antarctic yeast protein
Plos One, 7, 2012
2LQ2
DownloadVisualize
BU of 2lq2 by Molmil
Solution structure of de novo designed peptide 4m
分子名称: de novo designed antifreeze peptide 4m
著者Bhunia, A.
登録日2012-02-22
公開日2012-10-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures, dynamics, and ice growth inhibitory activity of Peptide fragments derived from an antarctic yeast protein
Plos One, 7, 2012
2MD3
DownloadVisualize
BU of 2md3 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide:biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2MJX
DownloadVisualize
BU of 2mjx by Molmil
Solution NMR structure of a mismatch DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*TP*AP*CP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*CP*G)-3')
著者Ghosh, A, Kumar, K.R, Bhunia, A, Chatterjee, S.
登録日2014-01-21
公開日2014-03-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Double GC:GC mismatch in dsDNA enhances local dynamics retaining the DNA footprint: a high-resolution NMR study
Chemmedchem, 9, 2014
2MD4
DownloadVisualize
BU of 2md4 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide: biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2MD2
DownloadVisualize
BU of 2md2 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide: biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2MD1
DownloadVisualize
BU of 2md1 by Molmil
Fragment based approach and binding behavior of LFampinB with Lipopolysaccharide:biophysical aspects
分子名称: Lactotransferrin
著者Bhunia, A, Chatterjee, S, Ghosh, A, Jana, J.
登録日2013-08-29
公開日2013-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization.
Mol Biosyst, 10, 2014
2ND8
DownloadVisualize
BU of 2nd8 by Molmil
Structures of DK17 in TBLE LUVS
分子名称: Cell penetrating peptide
著者Bera, S, Bhunia, A.
登録日2016-05-11
公開日2017-03-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Elucidation of the Cell-Penetrating Penetratin Peptide in Model Membranes at the Atomic Level: Probing Hydrophobic Interactions in the Blood-Brain Barrier
Biochemistry, 55, 2016
2ND7
DownloadVisualize
BU of 2nd7 by Molmil
Structure of DK17 in POPC:POPG:Cholesterol:GM1 LUVS
分子名称: Cell penetrating peptide
著者Bera, S, Bhunia, A.
登録日2016-05-11
公開日2017-03-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Elucidation of the Cell-Penetrating Penetratin Peptide in Model Membranes at the Atomic Level: Probing Hydrophobic Interactions in the Blood-Brain Barrier
Biochemistry, 55, 2016
2ND6
DownloadVisualize
BU of 2nd6 by Molmil
Structure of DK17 in GM1 LUVS
分子名称: Cell penetrating peptide
著者Bera, S, Bhunia, A.
登録日2016-05-11
公開日2017-03-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Elucidation of the Cell-Penetrating Penetratin Peptide in Model Membranes at the Atomic Level: Probing Hydrophobic Interactions in the Blood-Brain Barrier
Biochemistry, 55, 2016
7JOQ
DownloadVisualize
BU of 7joq by Molmil
Structure of NV1 small terminase
分子名称: Small Terminase subunit
著者Cingolani, G, Lokareddy, R.
登録日2020-08-07
公開日2020-11-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Biophysical analysis of Pseudomonas-phage PaP3 small terminase suggests a mechanism for sequence-specific DNA-binding by lateral interdigitation.
Nucleic Acids Res., 48, 2020
7K5C
DownloadVisualize
BU of 7k5c by Molmil
Structure of T7 DNA ejectosome periplasmic tunnel
分子名称: Internal virion protein gp15, Peptidoglycan transglycosylase gp16
著者Swanson, N, Cingolani, G, Pumroy, R.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structure of the periplasmic tunnel of T7 DNA-ejectosome at 2.7 angstrom resolution.
Mol.Cell, 81, 2021
6W7T
DownloadVisualize
BU of 6w7t by Molmil
Structure of PaP3 small terminase
分子名称: small terminase subunit
著者Cingolani, G, Lokareddy, R.
登録日2020-03-19
公開日2020-11-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Biophysical analysis of Pseudomonas-phage PaP3 small terminase suggests a mechanism for sequence-specific DNA-binding by lateral interdigitation.
Nucleic Acids Res., 48, 2020
7UMI
DownloadVisualize
BU of 7umi by Molmil
Importin a1 bound to Cp183-CTD
分子名称: HBV-NLS, Importin subunit alpha-1
著者Yang, R, Cingolani, G.
登録日2022-04-07
公開日2023-10-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural basis for nuclear import of hepatitis B virus (HBV) nucleocapsid core.
Sci Adv, 10, 2024
8U10
DownloadVisualize
BU of 8u10 by Molmil
In situ cryo-EM structure of bacteriophage P22 gp1:gp4:gp5:gp10:gp9 N-term complex in conformation 1 at 3.2A resolution
分子名称: Major capsid protein, Packaged DNA stabilization protein gp10, Peptidoglycan hydrolase gp4, ...
著者Iglesias, S, Feng-Hou, C, Cingolani, G.
登録日2023-08-30
公開日2023-11-22
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular Architecture of Salmonella Typhimurium Virus P22 Genome Ejection Machinery.
J.Mol.Biol., 435, 2023

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon