3AFG
| Crystal structure of ProN-Tk-SP from Thermococcus kodakaraensis | 分子名称: | CALCIUM ION, Subtilisin-like serine protease | 著者 | Foophow, T, Tanaka, S, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-03-01 | 公開日 | 2010-08-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: requirement of a C-terminal beta-jelly roll domain for hyperstability. J.Mol.Biol., 400, 2010
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3A3P
| Crystal structure of complex between E201A/SA-subtilisin and Tk-propeptide | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-06-15 | 公開日 | 2009-08-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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2Z1I
| Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z57
| Crystal structure of G56E-propeptide:S324A-subtilisin complex | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-06-29 | 公開日 | 2008-01-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
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2Z30
| Crystal structure of complex form between mat-Tk-subtilisin and Tk-propeptide | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2Z1J
| Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K/T145K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z56
| Crystal structure of G56S-propeptide:S324A-subtilisin complex | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-06-29 | 公開日 | 2008-01-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
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2Z2X
| Crystal structure of mature form of Tk-subtilisin | 分子名称: | CALCIUM ION, Tk-subtilisin | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2Z2Z
| Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2 | 分子名称: | CALCIUM ION, Tk-subtilisin precursor | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.87 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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3ASM
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3ALY
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2YV0
| Structural and Thermodynamic Analyses of E. coli ribonuclease HI Variant with Quintuple Thermostabilizing Mutations | 分子名称: | Ribonuclease HI | 著者 | Haruki, M, Motegi, T, Tadokoro, T, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-04-06 | 公開日 | 2008-03-18 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structural and thermodynamic analyses of Escherichia coli RNase HI variant with quintuple thermostabilizing mutations. Febs J., 274, 2007
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2D0B
| Crystal structure of Bst-RNase HIII in complex with Mg2+ | 分子名称: | MAGNESIUM ION, ribonuclease HIII | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-07-31 | 公開日 | 2006-07-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
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2D0A
| Crystal structure of Bst-RNase HIII | 分子名称: | ribonuclease HIII | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-07-31 | 公開日 | 2006-07-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
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2DFH
| Crystal structure of Tk-RNase HII(1-212)-C | 分子名称: | Ribonuclease HII | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | 登録日 | 2006-03-01 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.27 Å) | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence Proteins, 68, 2007
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2DF5
| Crystal Structure of Pf-PCP(1-204)-C | 分子名称: | Pyrrolidone-carboxylate peptidase | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | 登録日 | 2006-02-24 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Conformational contagion in a protein: structural properties of a chameleon sequence Proteins, 68, 2007
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2E4L
| Thermodynamic and Structural Analysis of Thermolabile RNase HI from Shewanella oneidensis MR-1 | 分子名称: | Ribonuclease HI | 著者 | Tadokoro, T, You, D.J, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2006-12-13 | 公開日 | 2007-05-01 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural, thermodynamic, and mutational analyses of a psychrotrophic RNase HI. Biochemistry, 46, 2007
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2EHG
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2DFI
| Crystal structure of Pf-MAP(1-292)-C | 分子名称: | COBALT (II) ION, Methionine aminopeptidase | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | 登録日 | 2006-03-01 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence Proteins, 68, 2007
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2CZR
| Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA | 分子名称: | GLYCEROL, TBP-interacting protein, ZINC ION | 著者 | Yamamoto, T, Matsuda, T, Inoue, T, Matsumura, H, Morikawa, M, Kanaya, S, Kai, Y. | 登録日 | 2005-07-15 | 公開日 | 2006-02-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA Protein Sci., 15, 2006
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2D0C
| Crystal structure of Bst-RNase HIII in complex with Mn2+ | 分子名称: | MANGANESE (II) ION, ribonuclease HIII | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-07-31 | 公開日 | 2006-07-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
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2DFE
| Crystal structure of Tk-RNase HII(1-200)-C | 分子名称: | Ribonuclease HII | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | 登録日 | 2006-03-01 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence Proteins, 68, 2007
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2DFF
| Crystal structure of Tk-RNase HII(1-204)-C | 分子名称: | Ribonuclease HII | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | 登録日 | 2006-03-01 | 公開日 | 2007-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence Proteins, 68, 2007
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2ZJ6
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2Z8X
| Crystal structure of extracellular lipase from Pseudomonas sp. MIS38 | 分子名称: | CALCIUM ION, Lipase, ZINC ION | 著者 | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-09-11 | 公開日 | 2007-10-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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