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5H03
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BU of 5h03 by Molmil
Crystal structure of an ADP-ribosylating toxin BECa from C. perfringens
分子名称: Binary enterotoxin of Clostridium perfringens component a
著者Kawahara, K, Yonogi, S, Munetomo, R, Oki, H, Yoshida, T, Ohkubo, T, Kumeda, Y, Matsuda, S, Kodama, T, Iida, T, Nakamura, S.
登録日2016-10-03
公開日2016-11-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of the ADP-ribosylating component of BEC, the binary enterotoxin of Clostridium perfringens.
Biochem.Biophys.Res.Commun., 480, 2016
1EHD
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BU of 1ehd by Molmil
CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI
分子名称: AGGLUTININ ISOLECTIN VI
著者Harata, K, Muraki, M.
登録日2000-02-20
公開日2000-04-05
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose.
J.Mol.Biol., 297, 2000
1EHH
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BU of 1ehh by Molmil
CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI COMPLEX WITH TRI-N-ACETYLCHITOTRIOSE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AGGLUTININ ISOLECTIN VI
著者Harata, K, Muraki, M.
登録日2000-02-21
公開日2000-04-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose.
J.Mol.Biol., 297, 2000
3T5W
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BU of 3t5w by Molmil
2ME modified human SOD1
分子名称: COPPER (I) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
著者Ihara, K, Yamaguchi, Y, Torigoe, H, Wakatsuki, S, Taniguchi, N, Suzuki, K, Fujiwara, N.
登録日2011-07-28
公開日2012-08-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural switching of Cu,Zn-superoxide dismutases at loop VI: insights from the crystal structure of 2-mercaptoethanol-modified enzyme
Biosci.Rep., 32, 2012
1IQB
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BU of 1iqb by Molmil
Crystal Structure of Urtica dioica Agglutinin Isolectin I
分子名称: AGGLUTININ ISOLECTIN I, ZINC ION
著者Harata, K, Schubert, W.D, Muraki, M.
登録日2001-07-15
公開日2001-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Urtica dioica agglutinin isolectin I: dimer formation mediated by two zinc ions bound at the sugar-binding site.
Acta Crystallogr.,Sect.D, 57, 2001
1JSE
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BU of 1jse by Molmil
FULL-MATRIX LEAST-SQUARES REFINEMENT OF TURKEY LYSOZYME
分子名称: LYSOZYME, N-PROPANOL
著者Harata, K, Abe, Y, Muraki, M.
登録日1998-01-05
公開日1998-04-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Full-matrix least-squares refinement of lysozymes and analysis of anisotropic thermal motion.
Proteins, 30, 1998
1JSF
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BU of 1jsf by Molmil
FULL-MATRIX LEAST-SQUARES REFINEMENT OF HUMAN LYSOZYME
分子名称: LYSOZYME, NITRATE ION
著者Harata, K, Abe, Y, Muraki, M.
登録日1998-01-05
公開日1998-04-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Full-matrix least-squares refinement of lysozymes and analysis of anisotropic thermal motion.
Proteins, 30, 1998
2D4K
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BU of 2d4k by Molmil
Monoclinic hen egg-white lysozyme crystallized at 313K
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Harata, K, Akiba, T.
登録日2005-10-20
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural phase transition of monoclinic crystals of hen egg-white lysozyme
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2D4I
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BU of 2d4i by Molmil
Monoclinic hen egg-white lysozyme crystallized at pH4.5 form heavy water solution
分子名称: Lysozyme C, NITRATE ION, SODIUM ION
著者Harata, K, Akiba, T.
登録日2005-10-20
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structural phase transition of monoclinic crystals of hen egg-white lysozyme
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2D4J
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BU of 2d4j by Molmil
Transformed monoclinic crystal of hen egg-white lysozyme from a heavy water solution
分子名称: Lysozyme C, NITRATE ION
著者Harata, K, Akiba, T.
登録日2005-10-20
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structural phase transition of monoclinic crystals of hen egg-white lysozyme
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
3VTO
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BU of 3vto by Molmil
The crystal structure of the C-terminal domain of Mu phage central spike
分子名称: CALCIUM ION, CHLORIDE ION, FE (III) ION, ...
著者Harada, K, Yamashita, E, Nakagawa, A, Takeda, S.
登録日2012-06-01
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion
Biochim.Biophys.Acta, 1834, 2013
3VTN
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BU of 3vtn by Molmil
The crystal structure of the C-terminal domain of Mu phage central spike - Pt derivative for MAD
分子名称: FE (III) ION, PLATINUM (II) ION, Protein gp45
著者Harada, K, Yamashita, E, Nakagawa, A, Takeda, S.
登録日2012-06-01
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion
Biochim.Biophys.Acta, 1834, 2013
3WJ1
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BU of 3wj1 by Molmil
Crystal structure of SSHESTI
分子名称: Carboxylesterase, octyl beta-D-glucopyranoside
著者Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
登録日2013-10-03
公開日2014-07-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
3WJ2
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BU of 3wj2 by Molmil
Crystal structure of ESTFA (FE-lacking apo form)
分子名称: Carboxylesterase
著者Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
登録日2013-10-03
公開日2014-07-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
2Z12
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BU of 2z12 by Molmil
Structure of the transformed monoclinic lysozyme by controlled dehydration
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Harata, K, Akiba, T.
登録日2007-05-07
公開日2008-03-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals.
Acta Crystallogr.,Sect.D, 63, 2007
2Z19
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BU of 2z19 by Molmil
Phase transition of monoclinic lysozyme crystal soaked in a saturated NaCl solution
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Harata, K, Akiba, T.
登録日2007-05-08
公開日2008-03-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals.
Acta Crystallogr.,Sect.D, 63, 2007
2Z18
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BU of 2z18 by Molmil
Phase transition of monoclinic lysozyme crystal soaked in a 10% NaCl solution
分子名称: CHLORIDE ION, Lysozyme C, NITROGEN MOLECULE, ...
著者Harata, K, Akiba, T.
登録日2007-05-08
公開日2008-03-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Effect of a sodium ion on the dehydration-induced phase transition of monoclinic lysozyme crystals.
Acta Crystallogr.,Sect.D, 63, 2007
8W7D
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BU of 8w7d by Molmil
Crystal structure of EcPPAT-FR901483 complex
分子名称: Amidophosphoribosyltransferase, [(1S,3S,6S,7S,8R,9S)-6-[(4-methoxyphenyl)methyl]-3-(methylamino)-7-oxidanyl-5-azatricyclo[6.3.1.0^1,5]dodecan-9-yl] dihydrogen phosphate
著者Hara, K, Hashimoto, H, Nakahara, M, Sato, M, Watanabe, K.
登録日2023-08-30
公開日2023-12-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Uncommon Arrangement of Self-resistance Allows Biosynthesis of de novo Purine Biosynthesis Inhibitor that Acts as an Immunosuppressor.
J.Am.Chem.Soc., 145, 2023
8YHR
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BU of 8yhr by Molmil
DHODH in complex with furocoumavirin
分子名称: 4-methyl-8-[(S)-oxidanyl(phenyl)methyl]-9-phenyl-furo[2,3-h]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
著者Hara, K, Okumura, H, Nakahara, M, Sato, M, Hashimoto, H, Osada, H, Watanabe, K.
登録日2024-02-28
公開日2024-05-22
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Functional Analyses of Inhibition of Human Dihydroorotate Dehydrogenase by Antiviral Furocoumavirin.
Biochemistry, 63, 2024
8Y2S
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BU of 8y2s by Molmil
P-hydroxybenzoate hydroxylase complexed with 4-hydroxy-3-methylbenzoic acid
分子名称: 3-methyl-4-oxidanyl-benzoic acid, 4-hydroxybenzoate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2024-01-27
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional Enhancement of Flavin-Containing Monooxygenase through Machine Learning Methodology
Acs Catalysis, 14, 2024
7BR0
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BU of 7br0 by Molmil
Crystal structure of AclR, a thioredoxin oxidoreductase fold protein carrying the CXXH catalytic motif
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Pyr_redox_2 domain-containing protein
著者Hara, K, Hashimoto, H, Maeda, N, Watanabe, K, Hertweck, C, Tsunematsu, Y.
登録日2020-03-26
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Specialized Flavoprotein Promotes Sulfur Migration and Spiroaminal Formation in Aspirochlorine Biosynthesis.
J.Am.Chem.Soc., 143, 2021
5YY2
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BU of 5yy2 by Molmil
Crystal structure of AsqI with Zn
分子名称: Uncharacterized protein AsqI, ZINC ION
著者Hara, K, Hashimoto, H, Kishimoto, S, Watanabe, K.
登録日2017-12-07
公開日2018-08-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Enzymatic one-step ring contraction for quinolone biosynthesis.
Nat Commun, 9, 2018
5YY3
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BU of 5yy3 by Molmil
Crystal structure of AsqI
分子名称: Uncharacterized protein AsqI
著者Hara, K, Hashimoto, H, Kishimoto, S, Watanabe, K.
登録日2017-12-07
公開日2018-08-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献Enzymatic one-step ring contraction for quinolone biosynthesis.
Nat Commun, 9, 2018
7CP6
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BU of 7cp6 by Molmil
Crystal structure of FqzB
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase, ...
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2020-08-06
公開日2020-12-30
最終更新日2021-01-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020
7CP7
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BU of 7cp7 by Molmil
Crystal structure of FqzB, native proteins
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2020-08-06
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020

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