4KEQ
| Crystal structure of 4-pyridoxolactonase, 5-pyridoxolactone bound | 分子名称: | 1,2-ETHANEDIOL, 4-pyridoxolactonase, 7-hydroxy-6-methylfuro[3,4-c]pyridin-3(1H)-one, ... | 著者 | Kobayashi, J, Yoshikane, Y, Baba, S, Mizutani, K, Takahashi, N, Mikami, B, Yagi, T. | 登録日 | 2013-04-26 | 公開日 | 2014-04-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.279 Å) | 主引用文献 | Structure of 4-pyridoxolactonase from Mesorhizobium loti. Acta Crystallogr.,Sect.F, 70, 2014
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5B42
| Crystal structure of the C-terminal endonuclease domain of Aquifex aeolicus MutL. | 分子名称: | CADMIUM ION, DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL | 著者 | Fukui, K, Baba, S, Kumasaka, T, Yano, T. | 登録日 | 2016-03-30 | 公開日 | 2016-07-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Structural Features and Functional Dependency on beta-Clamp Define Distinct Subfamilies of Bacterial Mismatch Repair Endonuclease MutL J.Biol.Chem., 291, 2016
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7VLE
| Oxy-deoxy intermediate of V2 hemoglobin at 55% oxygen saturation | 分子名称: | Extracellular A1 globin, Extracellular A2 globin, Extracellular B1 globin, ... | 著者 | Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-10-02 | 公開日 | 2022-05-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery. Biophys Physicobio., 19, 2022
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7VLD
| Oxy-deoxy intermediate of V2 hemoglobin at 69% oxygen saturation | 分子名称: | CALCIUM ION, Extracellular A1 globin, Extracellular A2 globin, ... | 著者 | Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-10-02 | 公開日 | 2022-05-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery. Biophys Physicobio., 19, 2022
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7VLF
| Oxy-deoxy intermediate of V2 hemoglobin at 26% oxygen saturation | 分子名称: | CALCIUM ION, Extracellular A1 globin, Extracellular A2 globin, ... | 著者 | Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-10-02 | 公開日 | 2022-05-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery. Biophys Physicobio., 19, 2022
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7VLC
| Oxy-deoxy intermediate of V2 hemoglobin at 78% oxygen saturation | 分子名称: | CALCIUM ION, Extracellular A1 globin, Extracellular A2 globin, ... | 著者 | Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-10-02 | 公開日 | 2022-05-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery. Biophys Physicobio., 19, 2022
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7X5F
| Nrf2-MafG heterodimer bound with CsMBE2 | 分子名称: | Nuclear factor erythroid 2-related factor 2, Synthetic DNA, Transcription factor MafG | 著者 | Sengoku, T, Shiina, M, Suzuki, K, Hamada, K, Sato, K, Uchiyama, A, Okada, C, Baba, S, Ohta, T, Motohashi, H, Yamamoto, M, Ogata, K. | 登録日 | 2022-03-04 | 公開日 | 2022-11-09 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural basis of transcription regulation by CNC family transcription factor, Nrf2. Nucleic Acids Res., 50, 2022
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7X5G
| Nrf2 (A510Y)-MafG heterodimer bound with CsMBE2 | 分子名称: | DNA (5'-D(*CP*AP*CP*AP*GP*TP*GP*AP*CP*TP*CP*AP*GP*CP*AP*G)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*TP*GP*AP*GP*TP*CP*AP*CP*TP*GP*T)-3'), Nuclear factor erythroid 2-related factor 2, ... | 著者 | Sengoku, T, Shiina, M, Suzuki, K, Hamada, K, Sato, K, Uchiyama, A, Okada, C, Baba, S, Ohta, T, Motohashi, H, Yamamoto, M, Ogata, K. | 登録日 | 2022-03-04 | 公開日 | 2022-11-09 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis of transcription regulation by CNC family transcription factor, Nrf2. Nucleic Acids Res., 50, 2022
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7X5E
| Nrf2-MafG heterodimer bound with CsMBE1 | 分子名称: | DNA (5'-D(*CP*AP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3'), DNA (5'-D(*GP*TP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*T)-3'), HEXAETHYLENE GLYCOL, ... | 著者 | Sengoku, T, Shiina, M, Suzuki, K, Hamada, K, Sato, K, Uchiyama, A, Okada, C, Baba, S, Ohta, T, Motohashi, H, Yamamoto, M, Ogata, K. | 登録日 | 2022-03-04 | 公開日 | 2022-11-09 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis of transcription regulation by CNC family transcription factor, Nrf2. Nucleic Acids Res., 50, 2022
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3W7B
| Crystal structure of formyltetrahydrofolate deformylase from Thermus thermophilus HB8 | 分子名称: | Formyltetrahydrofolate deformylase | 著者 | Sampei, G, Yanagida, Y, Ogata, N, Kusano, M, Terao, K, Kawai, H, Fukai, Y, Kanagawa, M, Inoue, Y, Baba, S, Kawai, G. | 登録日 | 2013-02-28 | 公開日 | 2014-01-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.71 Å) | 主引用文献 | Structures and reaction mechanisms of the two related enzymes, PurN and PurU J.Biochem., 154, 2013
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3VIU
| Crystal structure of PurL from thermus thermophilus | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | 著者 | Suzuki, S, Yanai, H, Kanagawa, M, Tamura, S, Watanabe, Y, Fuse, K, Baba, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2011-10-12 | 公開日 | 2012-01-18 | 最終更新日 | 2012-04-25 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Structure of N-formylglycinamide ribonucleotide amidotransferase II (PurL) from Thermus thermophilus HB8 Acta Crystallogr.,Sect.F, 68, 2012
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3VOR
| Crystal Structure Analysis of the CofA | 分子名称: | CFA/III pilin | 著者 | Fukakusa, S, Kawahara, K, Nakamura, S, Iwasita, T, Baba, S, Nishimura, M, Kobayashi, Y, Honda, T, Iida, T, Taniguchi, T, Ohkubo, T. | 登録日 | 2012-02-06 | 公開日 | 2012-09-26 | 最終更新日 | 2013-07-31 | 実験手法 | X-RAY DIFFRACTION (0.9 Å) | 主引用文献 | Structure of the CFA/III major pilin subunit CofA from human enterotoxigenic Escherichia coli determined at 0.90 A resolution by sulfur-SAD phasing Acta Crystallogr.,Sect.D, 68, 2012
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2ZDC
| Crystal structure of dUTPase from Sulfolobus tokodaii | 分子名称: | 167aa long hypothetical dUTPase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION | 著者 | Kanagawa, M, Baba S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-11-21 | 公開日 | 2008-05-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of dUTPase from Sulfolobus tokodaii To be Published
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7E99
| Oxy-deoxy intermediate of 400 kDa giant hemoglobin at 13% oxygen saturation | 分子名称: | Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, Extracellular giant hemoglobin major globin subunit B2, ... | 著者 | Numoto, N, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-03-03 | 公開日 | 2021-10-06 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Coarse snapshots of oxygen-dissociation intermediates of a giant hemoglobin elucidated by determining the oxygen saturation in individual subunits in the crystalline state. Iucrj, 8, 2021
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7E97
| Oxy-deoxy intermediate of 400 kDa giant hemoglobin at 58% oxygen saturation | 分子名称: | Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, Extracellular giant hemoglobin major globin subunit B2, ... | 著者 | Numoto, N, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-03-03 | 公開日 | 2021-10-06 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Coarse snapshots of oxygen-dissociation intermediates of a giant hemoglobin elucidated by determining the oxygen saturation in individual subunits in the crystalline state. Iucrj, 8, 2021
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7E98
| Oxy-deoxy intermediate of 400 kDa giant hemoglobin at 21% oxygen saturation | 分子名称: | Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, Extracellular giant hemoglobin major globin subunit B2, ... | 著者 | Numoto, N, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-03-03 | 公開日 | 2021-10-06 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Coarse snapshots of oxygen-dissociation intermediates of a giant hemoglobin elucidated by determining the oxygen saturation in individual subunits in the crystalline state. Iucrj, 8, 2021
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7E96
| Oxy-deoxy intermediate of 400 kDa giant hemoglobin at 69% oxygen saturation | 分子名称: | CALCIUM ION, Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, ... | 著者 | Numoto, N, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | 登録日 | 2021-03-03 | 公開日 | 2021-10-06 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Coarse snapshots of oxygen-dissociation intermediates of a giant hemoglobin elucidated by determining the oxygen saturation in individual subunits in the crystalline state. Iucrj, 8, 2021
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7CDM
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 42 kGy (4500 images from 2nd half of data set) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDN
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 42 kGy (9000 images) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDK
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 42 kGy (4500 images from 1st half of data set) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDP
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 42 kGy (3000 images) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDQ
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 83 kGy (3000 images) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDR
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 210 kGy (3000 images) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDO
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 21 kGy (3000 images) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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7CDU
| Lysozyme room-temperature structure determined by SS-ROX combined with HAG method, 1700 kGy (3000 images) | 分子名称: | Lysozyme C, MALONATE ION, SODIUM ION | 著者 | Hasegawa, K, Baba, S, Kawamura, T, Yamamoto, M, Kumasaka, T. | 登録日 | 2020-06-20 | 公開日 | 2021-03-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Evaluation of the data-collection strategy for room-temperature micro-crystallography studied by serial synchrotron rotation crystallography combined with the humid air and glue-coating method. Acta Crystallogr.,Sect.D, 77, 2021
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