Search by PDB author - 日本蛋白質構造データバンク

English 日本語简体中文繁體中文 한국어

✖

ﾒﾆｭｰ

RCSB PDB PDBe BMRB Adv. Search Search help

Search by PDB author

Visualize

BU of 7o8g by Molmil

NmHR light state structure at 10 ps after photoexcitation determined by serial femtosecond crystallography (with extrapolated, dark and light dataset)
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8i by Molmil

NmHR light state structure at 1 us after photoexcitation determined by serial femtosecond crystallography (with extrapolated, dark and light dataset)
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8s by Molmil

NmHR light state structure at 32.5 ms (30 - 35 ms) after photoexcitation determined by serial millisecond crystallography
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8z by Molmil

Anomalous bromide substructure of NmHR under continuous illumination determined at 13.7 keV with serial crystallography
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, BROMIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8j by Molmil

NmHR light state structure at 20 us after photoexcitation determined by serial femtosecond crystallography (with extrapolated, dark and light dataset)
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8n by Molmil

NmHR light state structure at 7.5 ms (5 - 10 ms) after photoexcitation determined by serial millisecond crystallography
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Chloride pumping rhodopsin, OLEIC ACID, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8y by Molmil

Anomalous bromide substructure of NmHR under dark state conditions determined at 13.7 keV with serial crystallography
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, BROMIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8l by Molmil

NmHR dark state structure determined by serial millisecond crystallography
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Chloride pumping rhodopsin, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 7o8o by Molmil

NmHR light state structure at 12.5 ms (10 - 15 ms) after photoexcitation determined by serial millisecond crystallography
分子名称:	(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Chloride pumping rhodopsin, OLEIC ACID, ...
著者	Mous, S, Gotthard, G, Ehrenberg, D, Sen, S, James, D, Johnson, P, Weinert, T, Nass, K, Furrer, A, Kekilli, D, Ma, P, Bruenle, S, Casadei, C, Martiel, I, Dworkowski, F, Gashi, D, Skopintsev, P, Wranik, M, Knopp, G, Panepucci, E, Panneels, V, Cirelli, C, Ozerov, D, Schertler, G, Wang, M, Milne, C, Standfuss, J, Schapiro, I, Heberle, J, Nogly, P.
登録日	2021-04-15
公開日	2022-02-09
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Dynamics and mechanism of a light-driven chloride pump. Science, 375, 2022

Visualize

BU of 6fkc by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS15
分子名称:	3-[1'-[(2~{S})-2-(4-chlorophenyl)-3-methyl-butanoyl]spiro[1,3-benzodioxole-2,4'-piperidine]-5-yl]propanoic acid, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.46 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fka by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS11
分子名称:	(2~{S})-2-(3,4-dichlorophenyl)-3-methyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fk9 by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS09
分子名称:	(2~{S})-3-methyl-2-phenyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.63 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fkd by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS16
分子名称:	5-chloranyl-2-(2-oxidanylidene-2-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-ethyl)-3~{H}-pyridin-6-one, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.49 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fk8 by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS08
分子名称:	(2~{R},3~{S})-3-azanyl-2-(4-chlorophenyl)-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.87 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fk7 by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS06
分子名称:	(2~{R},3~{R})-2-(4-chlorophenyl)-3-oxidanyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.62 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fkb by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS13
分子名称:	2-(4-chlorophenyl)-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (3.03 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 6fk6 by Molmil

Crystal structure of N2C/D282C stabilized opsin bound to RS01
分子名称:	(2~{S})-2-(4-chlorophenyl)-3-methyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one, PALMITIC ACID, Rhodopsin, ...
著者	Mattle, D, Standfuss, J, Dawson, R.
登録日	2018-01-23
公開日	2018-04-04
最終更新日	2024-05-01
実験手法	X-RAY DIFFRACTION (2.36 Å)
主引用文献	Ligand channel in pharmacologically stabilized rhodopsin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

Visualize

BU of 7o4h by Molmil

The structure of the native CNGA1/CNGB1 CNG channel from retinal rods
分子名称:	Cyclic nucleotide-gated cation channel beta-1, cGMP-gated cation channel alpha-1
著者	Barret, D.C.A, Marino, J.
登録日	2021-04-06
公開日	2022-01-12
最終更新日	2022-02-02
実験手法	ELECTRON MICROSCOPY (3.4 Å)
主引用文献	The structure of the native CNGA1/CNGB1 CNG channel from bovine retinal rods. Nat.Struct.Mol.Biol., 29, 2022

221051

件を2024-06-12に公開中

PDB statistics

PDBj update info

Contact PDBj

numon