Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5UKP
DownloadVisualize
BU of 5ukp by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522.1 Fab
分子名称: DH522.1 Fab fragment heavy chain, DH522.1 Fab fragment light chain
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
5UKN
DownloadVisualize
BU of 5ukn by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522UCA Fab
分子名称: CHLORIDE ION, DH522UCA Fab fragment heavy chain, DH522UCA Fab fragment light chain
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
3TL8
DownloadVisualize
BU of 3tl8 by Molmil
The AvrPtoB-BAK1 complex reveals two structurally similar kinaseinteracting domains in a single type III effector
分子名称: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, Effector protein HopAB2
著者Chai, J, Cheng, W, Gao, H.
登録日2011-08-29
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Analysis of Pseudomonas syringae AvrPtoB Bound to Host BAK1 Reveals Two Similar Kinase-Interacting Domains in a Type III Effector.
Cell Host Microbe, 10, 2011
2GYT
DownloadVisualize
BU of 2gyt by Molmil
Solution structure of the SAM (sterile alpha motif) domain of DLC1 (deleted in liver cancer 1)
分子名称: Deleted in liver cancer 1 protein, isoform 2
著者Yang, S.
登録日2006-05-10
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The SAM domain of the RhoGAP DLC1 binds EF1A1 to regulate cell migration
J.Cell.Sci., 122, 2009
4JLK
DownloadVisualize
BU of 4jlk by Molmil
Human dCK C4S-S74E mutant in complex with UDP and the F2.2.1 inhibitoR (2-[({2-[3-(2-FLUOROETHOXY)-4-METHOXYPHENYL]-5-METHYL-1,3-THIAZOL-4-YL}METHYL)SULFANYL]PYRIMIDINE-4,6-DIAMINE)
分子名称: 2-[({2-[3-(2-fluoroethoxy)-4-methoxyphenyl]-5-methyl-1,3-thiazol-4-yl}methyl)sulfanyl]pyrimidine-4,6-diamine, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
著者Nomme, J, Lavie, A.
登録日2013-03-12
公開日2013-09-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Development of new deoxycytidine kinase inhibitors and noninvasive in vivo evaluation using positron emission tomography.
J.Med.Chem., 56, 2013
3RN5
DownloadVisualize
BU of 3rn5 by Molmil
Structural basis of cytosolic DNA recognition by innate immune receptors
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*TP*CP*AP*AP*AP*GP*AP*GP*AP*GP*AP*AP*AP*GP*AP*G)-3'), DNA (5'-D(*GP*CP*TP*CP*TP*TP*TP*CP*TP*CP*TP*CP*TP*TP*TP*GP*AP*TP*G)-3'), ...
著者Jin, T.C, Xiao, T.
登録日2011-04-21
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor.
Immunity, 36, 2012
3RNU
DownloadVisualize
BU of 3rnu by Molmil
Structural Basis of Cytosolic DNA Sensing by Innate Immune Receptors
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*CP*AP*TP*CP*AP*AP*AP*GP*AP*GP*AP*GP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*CP*TP*TP*TP*GP*AP*TP*GP*GP*CP*C)-3'), ...
著者Jin, T.C, Xiao, T.
登録日2011-04-22
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor.
Immunity, 36, 2012
5V0N
DownloadVisualize
BU of 5v0n by Molmil
BACE1 in complex with inhibitor 5g
分子名称: Beta-secretase 1, GLYCEROL, N-{(1S,2S)-1-[(2S)-4-benzyl-3-oxopiperazin-2-yl]-1-hydroxy-3-phenylpropan-2-yl}-7-ethyl-1,3,3-trimethyl-2,2-dioxo-1,2,3,4-tetrahydro-2lambda~6~-[1,2,5]thiadiazepino[3,4,5-hi]indole-9-carboxamide, ...
著者Mesecar, A, Ghosh, A, Yen, Y.-C.
登録日2017-02-28
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.155 Å)
主引用文献Design, synthesis, and X-ray structural studies of BACE-1 inhibitors containing substituted 2-oxopiperazines as P1'-P2' ligands.
Bioorg. Med. Chem. Lett., 27, 2017
3LAM
DownloadVisualize
BU of 3lam by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with N1-propyl pyrimidinedione non-nucleoside inhibitor
分子名称: 3-methyl-5-{[5-(1-methylethyl)-2,6-dioxo-3-propyl-1,2,3,6-tetrahydropyrimidin-4-yl]carbonyl}benzonitrile, HIV Reverse transcriptase, SULFATE ION
著者Lansdon, E.B, Mitchell, M.L.
登録日2010-01-06
公開日2010-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 20, 2010
3RN2
DownloadVisualize
BU of 3rn2 by Molmil
Structural Basis of Cytosolic DNA Recognition by Innate Immune Receptors
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*TP*CP*AP*AP*AP*GP*AP*TP*CP*TP*TP*TP*GP*AP*TP*GP*G)-3'), Interferon-inducible protein AIM2
著者Jin, T.C, Xiao, T.
登録日2011-04-21
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor.
Immunity, 36, 2012
2N51
DownloadVisualize
BU of 2n51 by Molmil
NMR structure of the C-terminal region of human eukaryotic elongation factor 1B
分子名称: Elongation factor 1-delta
著者Wu, H, Feng, Y.
登録日2015-07-02
公開日2016-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The C-terminal region of human eukaryotic elongation factor 1B delta.
J.Biomol.Nmr, 64, 2016
3DM1
DownloadVisualize
BU of 3dm1 by Molmil
Crystal structure of the complex of human chromobox homolog 3 (CBX3) with peptide
分子名称: Chromobox protein homolog 3, Histone-lysine N-methyltransferase, H3 lysine-9 specific 3
著者Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
登録日2008-06-30
公開日2008-08-19
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of the chromodomain of Cbx3 bound to methylated peptides from histone h1 and G9a.
Plos One, 7, 2012
3L95
DownloadVisualize
BU of 3l95 by Molmil
Crystal structure of the human Notch1 Negative Regulatory Region (NRR) bound to the fab fragment of an antagonist antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neurogenic locus notch homolog protein 1, ...
著者Hymowitz, S.G, de Leon, G.P.
登録日2010-01-04
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Therapeutic antibody targeting of individual Notch receptors.
Nature, 464, 2010
2QJ6
DownloadVisualize
BU of 2qj6 by Molmil
Crystal structure analysis of a 14 repeat C-terminal fragment of toxin TcdA in Clostridium difficile
分子名称: Toxin A
著者Albesa-Jove, D, Bertrand, T, Carpenter, L, Lim, J, Brown, K.A, Fairweather, N.
登録日2007-07-06
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Solution and crystal structures of the cell binding domain of toxins TcdA and TcdB from Clostridium difficile
To be Published
2FEI
DownloadVisualize
BU of 2fei by Molmil
Solution structure of the second SH3 domain of Human CMS protein
分子名称: CD2-associated protein
著者Yao, B, Dai, H, Jiao, Y, Wu, J, Shi, Y.
登録日2005-12-15
公開日2006-12-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second SH3 domain of human CMS and a newly identified binding site at the C-terminus of c-Cbl
Biochim.Biophys.Acta, 1774, 2007
2NB4
DownloadVisualize
BU of 2nb4 by Molmil
Solution structure of Q388A3 PDZ domain
分子名称: Putative uncharacterized protein
著者Mei, S.
登録日2016-01-24
公開日2016-02-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Q388A3 PDZ domain from Trypanosoma brucei
J.Struct.Biol., 194, 2016
2N7S
DownloadVisualize
BU of 2n7s by Molmil
Solution Structure of Leptospiral LigA4 Big Domain
分子名称: Ig-like repeat domain protein 1
著者Mei, S.
登録日2015-09-17
公開日2015-10-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of leptospiral LigA4 Big domain.
Biochem. Biophys. Res. Commun., 467, 2015
2MQG
DownloadVisualize
BU of 2mqg by Molmil
Solution structure of a bacterial immunoglobulin-like domain form a surface protein of Leptospira
分子名称: LigB
著者Mei, S.
登録日2014-06-19
公開日2014-07-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a bacterial immunoglobulin-like domain of the outer membrane protein (LigB) from Leptospira.
Proteins, 83, 2015
2LN0
DownloadVisualize
BU of 2ln0 by Molmil
Structure of MOZ
分子名称: Histone acetyltransferase KAT6A, ZINC ION
著者Qiu, Y.
登録日2011-12-15
公開日2012-06-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Combinatorial readout of unmodified H3R2 and acetylated H3K14 by the tandem PHD finger of MOZ reveals a regulatory mechanism for HOXA9 transcription.
Genes Dev., 26, 2012
5H5Y
DownloadVisualize
BU of 5h5y by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: Non-LEE encoded effector protein NleB
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5KN3
DownloadVisualize
BU of 5kn3 by Molmil
Recombinant bovine skeletal calsequestrin, low-Ca2+ form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
著者Lewis, K.M, Byrd, S, Kang, C.
登録日2016-06-27
公開日2016-10-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Characterization of Post-Translational Modifications to Calsequestrins of Cardiac and Skeletal Muscle.
Int J Mol Sci, 17, 2016
4US9
DownloadVisualize
BU of 4us9 by Molmil
Aldehyde Oxidoreductase from Desulfovibrio gigas (MOP), soaked with 3- phenylpropionaldehyde
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), 3-PHENYLPROPANAL, ALDEHYDE OXIDOREDUCTASE, ...
著者Correia, H.D, Romao, M.J, Santos-Silva, T.
登録日2014-07-03
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Aromatic Aldehydes at the Active Site of Aldehyde Oxidoreductase from Desulfovibrio Gigas: Reactivity and Molecular Details of the Enzyme-Substrate and Enzyme-Product Interaction.
J.Biol.Inorg.Chem., 20, 2015
6QOD
DownloadVisualize
BU of 6qod by Molmil
Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 7 (2-Amino-6-fluorobenzothiazole)
分子名称: 6-fluoro-1,3-benzothiazol-2-amine, tRNA (guanine-N(1)-)-methyltransferase
著者Thomas, S.E, Whitehouse, A.J, Coyne, A.G, Abell, C, Mendes, V, Blundell, T.L.
登録日2019-02-12
公開日2020-03-04
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.852 Å)
主引用文献Fragment-based discovery of a new class of inhibitors targeting mycobacterial tRNA modification.
Nucleic Acids Res., 48, 2020
6QOJ
DownloadVisualize
BU of 6qoj by Molmil
Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 13 (4-Hydroxyquinazoline)
分子名称: 3,4-dihydroquinazolin-4-ol, tRNA (guanine-N(1)-)-methyltransferase
著者Thomas, S.E, Whitehouse, A.J, Coyne, A.G, Abell, C, Mendes, V, Blundell, T.L.
登録日2019-02-12
公開日2020-02-26
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.023 Å)
主引用文献Fragment-based discovery of a new class of inhibitors targeting mycobacterial tRNA modification.
Nucleic Acids Res., 48, 2020
6QOP
DownloadVisualize
BU of 6qop by Molmil
Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 19 (5-fluoroquinazolin-4-ol)
分子名称: 5-fluoranyl-3,4-dihydroquinazolin-4-ol, SULFATE ION, tRNA (guanine-N(1)-)-methyltransferase
著者Thomas, S.E, Whitehouse, A.J, Coyne, A.G, Abell, C, Mendes, V, Blundell, T.L.
登録日2019-02-12
公開日2020-02-26
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.912 Å)
主引用文献Fragment-based discovery of a new class of inhibitors targeting mycobacterial tRNA modification.
Nucleic Acids Res., 48, 2020

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon