Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7F8K
DownloadVisualize
BU of 7f8k by Molmil
Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T.
登録日2021-07-02
公開日2021-09-08
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
Acta Crystallogr.,Sect.F, 77, 2021
3VHV
DownloadVisualize
BU of 3vhv by Molmil
Mineralocorticoid receptor ligand-binding domain with non-steroidal antagonist
分子名称: 1,2-ETHANEDIOL, 6-[(1E)-2-phenyl-N-(3-sulfanyl-4H-1,2,4-triazol-4-yl)ethanimidoyl]-2H-1,4-benzoxazin-3(4H)-one, 6-[(7S)-7-phenyl-7H-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazin-6-yl]-2H-1,4-benzoxazin-3(4H)-one, ...
著者Sogabe, S, Habuka, N.
登録日2011-09-07
公開日2011-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Identification of Benzoxazin-3-one Derivatives as Novel, Potent, and Selective Nonsteroidal Mineralocorticoid Receptor Antagonists
J.Med.Chem., 54, 2011
1ETN
DownloadVisualize
BU of 1etn by Molmil
MOLECULAR STRUCTURE OF THE TOXIC DOMAIN OF HEAT-STABLE ENTEROTOXIN PRODUCED BY A PATHOGENIC STRAIN OF ESCHERICHIA COLI
分子名称: 5-BETA-MERCAPTOPROPIONATE HEAT-STABLE ENTEROTOXIN
著者Sato, T, Shimonishi, Y.
登録日1994-03-15
公開日1996-01-29
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Molecular structure of the toxin domain of heat-stable enterotoxin produced by a pathogenic strain of Escherichia coli. A putative binding site for a binding protein on rat intestinal epithelial cell membranes.
J.Biol.Chem., 266, 1991
3KC6
DownloadVisualize
BU of 3kc6 by Molmil
Crystal structure of the large c-terminal domain of polymerase basic protein 2 from influenza virus a/viet nam/1203/2004 (h5n1)
分子名称: 1,2-ETHANEDIOL, Polymerase PB2
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-10-20
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Biological and structural characterization of a host-adapting amino acid in influenza virus.
Plos Pathog., 6, 2010
3KHW
DownloadVisualize
BU of 3khw by Molmil
Crystal structure of the large c-terminal domain of polymerase basic protein 2 from influenza virus a/mexico/indre4487/2009(h1n1)
分子名称: GLYCEROL, Polymerase PB2
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-10-31
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biological and structural characterization of a host-adapting amino acid in influenza virus.
Plos Pathog., 6, 2010
6A78
DownloadVisualize
BU of 6a78 by Molmil
Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the scFv fragment of murine monoclonal antibody B5209B
分子名称: Heavy chain and linker region of the anti-human Robo1 antibody B5209B scFv, Light chain region of the anti-human Robo1 antibody B5209B scFv, Roundabout homolog 1, ...
著者Mizohata, E, Nakayama, T, Kado, Y, Inoue, T.
登録日2018-07-02
公開日2019-01-30
最終更新日2019-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Affinity Improvement of a Cancer-Targeted Antibody through Alanine-Induced Adjustment of Antigen-Antibody Interface.
Structure, 27, 2019
8DMY
DownloadVisualize
BU of 8dmy by Molmil
Cryo-EM structure of cardiac muscle alpha-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-09
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DNF
DownloadVisualize
BU of 8dnf by Molmil
Cryo-EM structure of nonmuscle gamma-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 2, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-11
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DMX
DownloadVisualize
BU of 8dmx by Molmil
Cryo-EM structure of skeletal muscle alpha-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-08
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DNH
DownloadVisualize
BU of 8dnh by Molmil
Cryo-EM structure of nonmuscle beta-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-11
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
2D7G
DownloadVisualize
BU of 2d7g by Molmil
Crystal structure of the aa complex of the N-terminal domain of PriA
分子名称: DNA (5'-D(P*AP*A)-3'), Primosomal protein N'
著者Sasaki, K, Ose, T, Maenaka, K, Masai, H, Kohda, D.
登録日2005-11-21
公開日2006-11-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2D7H
DownloadVisualize
BU of 2d7h by Molmil
Crystal structure of the ccc complex of the N-terminal domain of PriA
分子名称: DNA (5'-D(P*CP*CP*C)-3'), Primosomal protein N'
著者Sasaki, K, Ose, T, Maenaka, K, Masai, H, Kohda, D.
登録日2005-11-21
公開日2006-11-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2D7E
DownloadVisualize
BU of 2d7e by Molmil
Crystal structure of N-terminal domain of PriA from E.coli
分子名称: Primosomal protein N'
著者Sasaki, K, Ose, T, Maenaka, K, Masai, H, Kohda, D.
登録日2005-11-18
公開日2006-11-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
1ETL
DownloadVisualize
BU of 1etl by Molmil
STRUCTURAL CHARACTERISTICS FOR BIOLOGICAL ACTIVITY OF HEAT-STABLE ENTEROTOXIN PRODUCED BY ENTEROTOXIGENIC ESCHERICHIA COLI: X-RAY CRYSTALLOGRAPHY OF WEAKLY TOXIC AND NONTOXIC ANALOGS
分子名称: 5-BETA-MERCAPTOPROPIONATE HEAT-STABLE ENTEROTOXIN
著者Sato, T, Shimonishi, Y.
登録日1994-03-15
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Structural characteristics for biological activity of heat-stable enterotoxin produced by enterotoxigenic Escherichia coli: X-ray crystallography of weakly toxic and nontoxic analogs.
Biochemistry, 33, 1994
6LYC
DownloadVisualize
BU of 6lyc by Molmil
Crystal structure of the NOD SIRPa complex with D4-2
分子名称: ACETIC ACID, D4-2, SIRPa of the NOD mouse strain
著者Murata, Y, Matsuda, M, Nakagawa, A, Matozaki, T.
登録日2020-02-14
公開日2020-07-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Macrocyclic Peptide-Mediated Blockade of the CD47-SIRP alpha Interaction as a Potential Cancer Immunotherapy.
Cell Chem Biol, 27, 2020
1ETM
DownloadVisualize
BU of 1etm by Molmil
STRUCTURAL CHARACTERISTICS FOR BIOLOGICAL ACTIVITY OF HEAT-STABLE ENTEROTOXIN PRODUCED BY ENTEROTOXIGENIC ESCHERICHIA COLI: X-RAY CRYSTALLOGRAPHY OF WEAKLY TOXIC AND NONTOXIC ANALOGS
分子名称: 5-BETA-MERCAPTOPROPIONATE HEAT-STABLE ENTEROTOXIN
著者Sato, T, Shimonishi, Y.
登録日1994-03-15
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Structural characteristics for biological activity of heat-stable enterotoxin produced by enterotoxigenic Escherichia coli: X-ray crystallography of weakly toxic and nontoxic analogs.
Biochemistry, 33, 1994
5K5B
DownloadVisualize
BU of 5k5b by Molmil
Wild-type PAS-GAF fragment from Deinococcus radiodurans BphP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, ACETATE ION, ...
著者Takala, H, Edlund, P, Claesson, E, Ihalainen, J.A, Westenhoff, S.
登録日2016-05-23
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography.
Sci Rep, 6, 2016
6Y7A
DownloadVisualize
BU of 6y7a by Molmil
X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate
分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ...
著者Tarnawski, M, Johnsson, K, Hiblot, J.
登録日2020-02-28
公開日2021-03-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag.
Biochemistry, 60, 2021
6Y7B
DownloadVisualize
BU of 6y7b by Molmil
X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-carbopyronine fluorophore substrate
分子名称: 4-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]-2-[3-(dimethylamino)-6-(dimethyl-$l^{4}-azanylidene)-10,10-dimethyl-anthracen-9-yl]benzoic acid, CHLORIDE ION, Haloalkane dehalogenase
著者Tarnawski, M, Johnsson, K, Hiblot, J.
登録日2020-02-28
公開日2021-03-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag.
Biochemistry, 60, 2021
6PU2
DownloadVisualize
BU of 6pu2 by Molmil
Dark, Mutant H275T , 100K, PCM Myxobacterial Phytochrome, P2
分子名称: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
著者Pandey, S, Schmidt, M, Stojkovic, E.A.
登録日2019-07-16
公開日2019-10-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
6PTQ
DownloadVisualize
BU of 6ptq by Molmil
Dark, Room Temperature, PCM Myxobacterial Phytochrome, P2, Wild Type
分子名称: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
著者Pandey, S, Schmidt, M, Stojkovic, E.A.
登録日2019-07-16
公開日2019-10-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
6PTX
DownloadVisualize
BU of 6ptx by Molmil
Dark, 100K, PCM Myxobacterial Phytochrome, P2, Wild Type,
分子名称: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
著者Pandey, S, Schmidt, M, Stojkovic, E.A.
登録日2019-07-16
公開日2019-10-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
3RCD
DownloadVisualize
BU of 3rcd by Molmil
HER2 Kinase Domain Complexed with TAK-285
分子名称: N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide, Receptor tyrosine-protein kinase erbB-2
著者Aertgeerts, K, Skene, R, Sogabe, S.
登録日2011-03-30
公開日2011-11-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Design and Synthesis of Novel Human Epidermal Growth Factor Receptor 2 (HER2)/Epidermal Growth Factor Receptor (EGFR) Dual Inhibitors Bearing a Pyrrolo[3,2-d]pyrimidine Scaffold.
J.Med.Chem., 54, 2011
6ZCC
DownloadVisualize
BU of 6zcc by Molmil
X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate
分子名称: ACETATE ION, CALCIUM ION, Haloalkane dehalogenase, ...
著者Tarnawski, M, Johnsson, K, Hiblot, J.
登録日2020-06-10
公開日2021-04-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag.
Biochemistry, 60, 2021
7YOW
DownloadVisualize
BU of 7yow by Molmil
Crystal structure of SARS-CoV-2 omicron variant spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: Fab Heavy chain, Fab Light chain, SULFATE ION, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-08-02
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon