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7QKB
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BU of 7qkb by Molmil
Crystal structure of human Cathepsin L in complex with covalently bound GC376
分子名称: CHLORIDE ION, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
著者Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
7QKA
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BU of 7qka by Molmil
Crystal structure of SARS-CoV-2 Main Protease in complex with covalently bound GC376
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide
著者Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
登録日2021-12-17
公開日2022-12-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
8PFF
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BU of 8pff by Molmil
Galectin-3C in complex with a triazolesulfone derivative
分子名称: (2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-(phenylsulfonyl)-1,2,3-triazol-1-yl]oxan-2-yl]sulfanyl-oxane-3,4,5-triol, Galectin-3, MAGNESIUM ION, ...
著者Kumar, R, Mahanti, M, Nilsson, U.J, Logan, D.T.
登録日2023-06-15
公開日2023-11-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Ligand Sulfur Oxidation State Progressively Alters Galectin-3-Ligand Complex Conformations To Induce Affinity-Influencing Hydrogen Bonds.
J.Med.Chem., 66, 2023
8P0E
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BU of 8p0e by Molmil
Rubella virus p150 macro domain in complex with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural polyprotein p200
著者Stoll, G.A, Modis, Y.
登録日2023-05-10
公開日2024-01-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystal structure and biochemical activity of the macrodomain from rubella virus p150.
J.Virol., 98, 2024
8PFR
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BU of 8pfr by Molmil
Mouse RPL39L integrated into the yeast 60S ribosomal subunit
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M.
登録日2023-06-16
公開日2024-06-26
最終更新日2024-12-25
実験手法ELECTRON MICROSCOPY (2.15 Å)
主引用文献Ribosomal protein RPL39L is an efficiency factor in the cotranslational folding of a subset of proteins with alpha helical domains.
Nucleic Acids Res., 52, 2024
8P8U
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BU of 8p8u by Molmil
Yeast 60S ribosomal subunit
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M.
登録日2023-06-02
公開日2024-06-12
最終更新日2024-12-25
実験手法ELECTRON MICROSCOPY (2.23 Å)
主引用文献Ribosomal protein RPL39L is an efficiency factor in the cotranslational folding of a subset of proteins with alpha helical domains.
Nucleic Acids Res., 52, 2024
8P8N
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BU of 8p8n by Molmil
Mouse RPL39 integrated into the yeast 60S ribosomal subunit
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M.
登録日2023-06-02
公開日2024-06-12
最終更新日2024-12-25
実験手法ELECTRON MICROSCOPY (2.15 Å)
主引用文献Ribosomal protein RPL39L is an efficiency factor in the cotranslational folding of a subset of proteins with alpha helical domains.
Nucleic Acids Res., 52, 2024
8Q6B
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BU of 8q6b by Molmil
The RSL-D32N - sulfonato-calix[8]arene complex, I23 form, citrate pH 4.0, obtained by cross-seeding
分子名称: Fucose-binding lectin protein, GLYCEROL, beta-D-fructopyranose, ...
著者Flood, R.J, Crowley, P.B.
登録日2023-08-11
公開日2024-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Supramolecular Synthons in Protein-Ligand Frameworks.
Cryst.Growth Des., 24, 2024
8QB8
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BU of 8qb8 by Molmil
Lsp1 in native eisosome lattice bound to plasma membrane microdomain
分子名称: Sphingolipid long chain base-responsive protein LSP1
著者Kefauver, J.M, Zou, L, Loewith, R.J, Desfosses, A.
登録日2023-08-24
公開日2024-07-24
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBF
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BU of 8qbf by Molmil
Compact state - Pil1 dimer with lipid headgroups fitted in native eisosome lattice bound to plasma membrane microdomain
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, PHOSPHOSERINE, Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QB7
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BU of 8qb7 by Molmil
Pil1 in native eisosome lattice bound to plasma membrane microdomain
分子名称: Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Loewith, R.J, Desfosses, A.
登録日2023-08-24
公開日2024-07-24
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBG
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BU of 8qbg by Molmil
Stretched state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
分子名称: Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBD
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BU of 8qbd by Molmil
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8QBE
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BU of 8qbe by Molmil
Compact state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
分子名称: Sphingolipid long chain base-responsive protein PIL1
著者Kefauver, J.M, Zou, L, Desfosses, A, Loewith, R.J.
登録日2023-08-24
公開日2024-07-24
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain.
Nature, 632, 2024
8Q8P
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BU of 8q8p by Molmil
Cryo-EM structure of the magnesium channel CtMrs2 in the closed state
分子名称: MAGNESIUM ION, Magnesium channel Mrs2
著者Gourdon, P, Li, P.
登録日2023-08-18
公開日2024-11-27
最終更新日2025-03-26
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Closed and open structures of the eukaryotic magnesium channel Mrs2 reveal the auto-ligand-gating regulation mechanism.
Nat.Struct.Mol.Biol., 32, 2025
8Q8Q
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BU of 8q8q by Molmil
Cryo-EM structure of the magnesium channel CtMrs2 in the open state
分子名称: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, MAGNESIUM ION, Magnesium channel Mrs2
著者Gourdon, P, Li, P.
登録日2023-08-18
公開日2024-11-27
最終更新日2025-03-26
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Closed and open structures of the eukaryotic magnesium channel Mrs2 reveal the auto-ligand-gating regulation mechanism.
Nat.Struct.Mol.Biol., 32, 2025
8Q2F
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BU of 8q2f by Molmil
Cytochrome P450 BM3 aMOx-A heme domain
分子名称: ACETATE ION, Bifunctional cytochrome P450/NADPH--P450 reductase, GLYCEROL, ...
著者Klaus, C, Kowal, J.L, Hammer, S.C, Niemann, H.H.
登録日2023-08-02
公開日2025-01-15
実験手法X-RAY DIFFRACTION (3.43 Å)
主引用文献Directed Evolution Enables Dynamic Control of Transient Intermediates for Anti-Markovnikov Wacker-Tsuji-Type Oxidation of Unactivated Alkenes
Chemrxiv, 2024
8QI7
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BU of 8qi7 by Molmil
Cryo-EM Structure of Human Serine Hydroxymethyltransferase, isoform 2 (SHMT2)
分子名称: Serine hydroxymethyltransferase, mitochondrial
著者Rutkiewicz, M, Tran, L.H, Ruszkowski, M.
登録日2023-09-11
公開日2023-09-20
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献New Structural Models of SHMT2
To Be Published
8R61
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BU of 8r61 by Molmil
Structure of IgE delta epsilon 3-4 in complex with a kappa binding nanobody
分子名称: HMM5 IgE light chain, Immunoglobulin E VH-Ceps1-Ceps1, kappa binding nanobody
著者Andersen, G.R, Gandini, R.
登録日2023-11-20
公開日2023-11-29
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The dynamics of hinge flexibility in receptor bound immunoglobulin E revealed by electron microscopy
Biorxiv, 2023
8QY4
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BU of 8qy4 by Molmil
Structure of interleukin 11 (gp130 P496L mutant).
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-11, ...
著者Gardner, S, Bubeck, D, Jin, Y.
登録日2023-10-25
公開日2024-02-21
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural insights into IL-11-mediated signalling and human IL6ST variant-associated immunodeficiency.
Nat Commun, 15, 2024
8QY5
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BU of 8qy5 by Molmil
Structure of interleukin 6.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-6, ...
著者Gardner, S, Bubeck, D, Jin, Y.
登録日2023-10-25
公開日2024-02-21
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into IL-11-mediated signalling and human IL6ST variant-associated immunodeficiency.
Nat Commun, 15, 2024
8QY6
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BU of 8qy6 by Molmil
Structure of interleukin 6 (gp130 P496L mutant).
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-6, ...
著者Gardner, S, Bubeck, D, Jin, Y.
登録日2023-10-25
公開日2024-02-21
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural insights into IL-11-mediated signalling and human IL6ST variant-associated immunodeficiency.
Nat Commun, 15, 2024
8P0V
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BU of 8p0v by Molmil
Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
分子名称: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, DENN domain-containing protein 10, ...
著者Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
登録日2023-05-10
公開日2024-03-20
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
8PKC
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BU of 8pkc by Molmil
Structure of Api m1 in complex with the AM1-4 nanobody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM1-4 nanobody, Phospholipase A2
著者Aagaard, J.B, Gandini, R, Spillner, E, Miehe, M.
登録日2023-06-26
公開日2024-05-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Nanobody-based IgG formats as blocking antibodies of the major honeybee venom allergen Api m 1
To be published
8OV8
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BU of 8ov8 by Molmil
Crystal structure of Ene-reductase 1 from black poplar mushroom in complex to NADP
分子名称: Ene-reductase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION, ...
著者Korf, L, Essen, L.-O, Karrer, D, Ruehl, M.
登録日2023-04-25
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Shifting the substrate scope of an ene/yne-reductase by loop engineering
To Be Published

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件を2025-07-09に公開中

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