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3IUH
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Co2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase
分子名称: COBALT (II) ION, L-rhamnose isomerase
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-31
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
2OHD
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BU of 2ohd by Molmil
Crystal structure of hypothetical molybdenum cofactor biosynthesis protein C from Sulfolobus tokodaii
分子名称: Probable molybdenum cofactor biosynthesis protein C
著者Yoshida, H, Yamada, M, Kuramitsu, S, Kamitori, S.
登録日2007-01-10
公開日2007-11-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a putative molybdenum-cofactor biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472)
Acta Crystallogr.,Sect.F, 64, 2008
2OU4
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Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii
分子名称: D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-02-09
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUL
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BU of 2qul by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii at 1.79 A resolution
分子名称: D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-08-06
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUM
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BU of 2qum by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii with D-tagatose
分子名称: D-tagatose, D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-08-06
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUN
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BU of 2qun by Molmil
Crystal Structure of D-tagatose 3-epimerase from Pseudomonas cichorii in Complex with D-fructose
分子名称: D-fructose, D-tagatose 3-epimerase, MANGANESE (II) ION
著者Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
登録日2007-08-06
公開日2007-12-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
8JQ5
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BU of 8jq5 by Molmil
Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with D-allulose
分子名称: D-psicose, L-rhamnose isomerase, MANGANESE (II) ION, ...
著者Yoshida, H, Yoshihara, A.
登録日2023-06-13
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ4
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Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with L-rhamnose
分子名称: L-rhamnose isomerase, MANGANESE (II) ION, alpha-L-rhamnopyranose, ...
著者Yoshida, H, Yoshihara, A.
登録日2023-06-13
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ6
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BU of 8jq6 by Molmil
Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with D-allose
分子名称: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-allopyranose, ...
著者Yoshida, H, Yoshihara, A.
登録日2023-06-13
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ3
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BU of 8jq3 by Molmil
Crystal structure of L-rhamnose isomerase from Lactobacillus rhamnosus
分子名称: L-rhamnose isomerase, MANGANESE (II) ION
著者Yoshida, H, Yoshihara, A.
登録日2023-06-13
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
4FQZ
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BU of 4fqz by Molmil
Crystal structure of a protease-resistant mutant form of human galectin-8
分子名称: 1,2-ETHANEDIOL, Galectin-8, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Yoshida, H, Kamitori, S.
登録日2012-06-26
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3NV3
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BU of 3nv3 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with biantennary oligosaccharide
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV4
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Crystal structure of human galectin-9 C-terminal CRD in complex with Sialyllactose
分子名称: Galectin 9 short isoform variant, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, NICKEL (II) ION
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV2
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BU of 3nv2 by Molmil
Crystal structure of human galectin-9 C-terminal CRD in complex with N-acetyllactosamine
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
3NV1
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BU of 3nv1 by Molmil
Crystal structure of human galectin-9 C-terminal CRD
分子名称: Galectin 9 short isoform variant, NICKEL (II) ION
著者Yoshida, H, Kamitori, S.
登録日2010-07-07
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose
J.Biol.Chem., 285, 2010
2I57
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BU of 2i57 by Molmil
Crystal Structure of L-Rhamnose Isomerase from Pseudomonas stutzeri in Complex with D-Allose
分子名称: D-ALLOSE, L-rhamnose isomerase, ZINC ION
著者Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
登録日2006-08-24
公開日2006-12-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
2I56
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Crystal structure of L-Rhamnose Isomerase from Pseudomonas stutzeri with L-Rhamnose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, ZINC ION
著者Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
登録日2006-08-24
公開日2006-12-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
2HCV
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BU of 2hcv by Molmil
Crystal structure of L-rhamnose isomerase from Pseudomonas stutzeri with metal ion
分子名称: L-rhamnose isomerase, ZINC ION
著者Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
登録日2006-06-19
公開日2006-12-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
4YTR
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BU of 4ytr by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy L-tagatose
分子名称: 1-deoxy-L-tagatose, 1-deoxy-beta-L-tagatopyranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
4YTQ
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BU of 4ytq by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy D-tagatose
分子名称: 1-deoxy-D-tagatose, 1-deoxy-alpha-D-tagatopyranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
4YTS
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BU of 4yts by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy 3-keto D-galactitol
分子名称: 1-deoxy-D-xylo-hex-3-ulose, 1-deoxy-alpha-D-xylo-hex-3-ulofuranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
4YTU
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BU of 4ytu by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with L-erythrulose
分子名称: D-tagatose 3-epimerase, L-Erythrulose, MANGANESE (II) ION
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
4YTT
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BU of 4ytt by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 6-deoxy L-psicose
分子名称: 6-deoxy-L-psicose, 6-deoxy-alpha-L-psicofuranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
登録日2015-03-18
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
7C06
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Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU.
分子名称: RNA (5'-R(*U*UP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ...
著者Yoshida, H, Park, S.Y, Urano, T, Obayashi, E.
登録日2020-04-30
公開日2020-09-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1.
Nat Commun, 11, 2020
7C08
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Crystal structure of S34Y mutant of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU.
分子名称: RNA (5'-R(*U*UP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ...
著者Yoshida, H, Park, S.Y, Urano, T, Obayashi, E.
登録日2020-04-30
公開日2020-09-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1.
Nat Commun, 11, 2020

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