2Z1D
| Crystal structure of [NiFe] hydrogenase maturation protein, HypD from Thermococcus kodakaraensis | 分子名称: | Hydrogenase expression/formation protein hypD, IRON/SULFUR CLUSTER | 著者 | Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K. | 登録日 | 2007-05-08 | 公開日 | 2007-07-17 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling Mol.Cell, 27, 2007
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3A44
| Crystal structure of HypA in the dimeric form | 分子名称: | Hydrogenase nickel incorporation protein hypA, ZINC ION | 著者 | Watanabe, S, Arai, T, Matsumi, R, Atomi, H, Imanaka, T, Miki, K. | 登録日 | 2009-06-30 | 公開日 | 2009-10-06 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.31 Å) | 主引用文献 | Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation. J.Mol.Biol., 394, 2009
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2ZHG
| Crystal structure of SoxR in complex with DNA | 分子名称: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DNA (5'-D(*DGP*DCP*DCP*DTP*DCP*DAP*DAP*DGP*DTP*DTP*DAP*DAP*DCP*DTP*DTP*DGP*DAP*DGP*DGP*DC)-3'), FE2/S2 (INORGANIC) CLUSTER, ... | 著者 | Watanabe, S, Kita, A, Kobayashi, K, Miki, K. | 登録日 | 2008-02-05 | 公開日 | 2008-03-25 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA Proc.Natl.Acad.Sci.Usa, 105, 2008
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6IGI
| Crystal structure of FT condition 2 | 分子名称: | 1,2-ETHANEDIOL, Protein FLOWERING LOCUS T | 著者 | Watanabe, S, Nakamura, Y, Kanehara, K, Inaba, K. | 登録日 | 2018-09-25 | 公開日 | 2019-12-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.33 Å) | 主引用文献 | High-Resolution Crystal Structure of Arabidopsis FLOWERING LOCUS T Illuminates Its Phospholipid-Binding Site in Flowering. Iscience, 21, 2019
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6IGH
| Crystal structure of FT condition3 | 分子名称: | 1,2-ETHANEDIOL, Protein FLOWERING LOCUS T | 著者 | Watanabe, S, Nakamura, Y, Kanehara, K, Inaba, K. | 登録日 | 2018-09-25 | 公開日 | 2019-12-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.01 Å) | 主引用文献 | High-Resolution Crystal Structure of Arabidopsis FLOWERING LOCUS T Illuminates Its Phospholipid-Binding Site in Flowering. Iscience, 21, 2019
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6IGG
| Crystal structure of FT condition 1 | 分子名称: | 1,2-ETHANEDIOL, Protein FLOWERING LOCUS T | 著者 | Watanabe, S, Nakamura, Y, Kanehara, K, Inaba, K. | 登録日 | 2018-09-25 | 公開日 | 2019-12-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1 Å) | 主引用文献 | High-Resolution Crystal Structure of Arabidopsis FLOWERING LOCUS T Illuminates Its Phospholipid-Binding Site in Flowering. Iscience, 21, 2019
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6IGJ
| Crystal structure of FT condition 4 | 分子名称: | MAGNESIUM ION, Protein FLOWERING LOCUS T | 著者 | Watanabe, S, Nakamura, Y, Kanehara, K, Inaba, K. | 登録日 | 2018-09-25 | 公開日 | 2019-12-25 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.501 Å) | 主引用文献 | High-Resolution Crystal Structure of Arabidopsis FLOWERING LOCUS T Illuminates Its Phospholipid-Binding Site in Flowering. Iscience, 21, 2019
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5AYK
| Crystal structure of ERdj5 form I | 分子名称: | 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, DnaJ homolog subfamily C member 10 | 著者 | Watanabe, S, Maegawa, K, Inaba, K. | 登録日 | 2015-08-22 | 公開日 | 2017-02-15 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation To Be Published
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5AYL
| Crystal structure of ERdj5 form II | 分子名称: | 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DnaJ homolog subfamily C member 10 | 著者 | Watanabe, S, Maegawa, K, Inaba, K. | 登録日 | 2015-08-22 | 公開日 | 2017-02-15 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation To Be Published
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5AZZ
| Crystal structure of seleno-insulin | 分子名称: | Insulin A chain, Insulin B chain | 著者 | Watanabe, S, Okumura, M, Arai, K, Takei, T, Asahina, Y, Hojo, H, Iwaoka, M, Inaba, K. | 登録日 | 2015-10-23 | 公開日 | 2017-05-03 | 最終更新日 | 2017-06-14 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Preparation of Selenoinsulin as a Long-Lasting Insulin Analogue. Angew. Chem. Int. Ed. Engl., 56, 2017
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7WWX
| Crystal structure of Herbaspirillum huttiense L-arabinose 1-dehydrogenase (NAD bound form) | 分子名称: | DI(HYDROXYETHYL)ETHER, NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family), NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Matsubara, R, Yoshiwara, K, Watanabe, Y, Watanabe, S. | 登録日 | 2022-02-14 | 公開日 | 2022-03-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.36 Å) | 主引用文献 | Crystal structure of L-arabinose 1-dehydrogenase as a short-chain reductase/dehydrogenase protein. Biochem.Biophys.Res.Commun., 604, 2022
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7C0E
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7C0C
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7CNR
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7CNQ
| Crystal structure of Agrobacterium tumefaciens aconitase X (holo-form) | 分子名称: | (2~{S},3~{R})-3-oxidanylpyrrolidine-2-carboxylic acid, FE2/S2 (INORGANIC) CLUSTER, cis-3-hydroxy-L-proline dehydratase | 著者 | Murase, Y, Watanabe, Y, Watanabe, S. | 登録日 | 2020-08-03 | 公開日 | 2021-06-16 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily. Commun Biol, 4, 2021
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7CNP
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7CNS
| Crystal structure of Thermococcus kodakaraensis aconitase X (holo-form) | 分子名称: | (3R)-3-HYDROXY-3-METHYL-5-(PHOSPHONOOXY)PENTANOIC ACID, DUF521 domain-containing protein, FE3-S4 CLUSTER, ... | 著者 | Murase, Y, Watanabe, Y, Watanabe, S. | 登録日 | 2020-08-03 | 公開日 | 2021-06-16 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.902 Å) | 主引用文献 | Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily. Commun Biol, 4, 2021
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7D2R
| Crystal structure of Agrobacterium tumefaciens aconitase X mutant - S449C/C510V | 分子名称: | FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, SODIUM ION, ... | 著者 | Murase, Y, Watanabe, Y, Watanabe, S. | 登録日 | 2020-09-17 | 公開日 | 2021-06-16 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.005 Å) | 主引用文献 | Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily. Commun Biol, 4, 2021
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7C0D
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8GST
| Crystal structure of L-2,4-diketo-3-deoxyrhamnonate hydrolase from Sphingomonas sp. (pyruvate bound-form) | 分子名称: | L-2,4-diketo-3-deoxyrhamnonate hydrolase, MAGNESIUM ION, PYRUVIC ACID | 著者 | Fukuhara, S, Watanabe, Y, Watanabe, S, Nishiwaki, H. | 登録日 | 2022-09-07 | 公開日 | 2023-02-08 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.71 Å) | 主引用文献 | Crystal Structure of l-2,4-Diketo-3-deoxyrhamnonate Hydrolase Involved in the Nonphosphorylated l-Rhamnose Pathway from Bacteria. Biochemistry, 62, 2023
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8GSR
| Crystal structure of L-2,4-diketo-3-deoxyrhamnonate hydrolase from Sphingomonas sp. (apo-form) | 分子名称: | L-2,4-diketo-3-deoxyrhamnonate hydrolase, MAGNESIUM ION | 著者 | Fukuhara, S, Watanabe, Y, Watanabe, S, Nishiwaki, H. | 登録日 | 2022-09-07 | 公開日 | 2023-02-08 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.73 Å) | 主引用文献 | Crystal Structure of l-2,4-Diketo-3-deoxyrhamnonate Hydrolase Involved in the Nonphosphorylated l-Rhamnose Pathway from Bacteria. Biochemistry, 62, 2023
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1J1W
| Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With NADP+ | 分子名称: | Isocitrate Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I. | 登録日 | 2002-12-19 | 公開日 | 2003-09-23 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Crystal Structure of the Monomeric Isocitrate Dehydrogenase in the Presence of NADP+ J.Biol.Chem., 278, 2003
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7B81
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8Y46
| Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-KDF or L-2,4-DKDF | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, L-2,4-diketo-3-deoxyfuconate, ... | 著者 | Akagashi, M, Watanabe, S. | 登録日 | 2024-01-30 | 公開日 | 2024-07-10 | 実験手法 | X-RAY DIFFRACTION (1.29 Å) | 主引用文献 | Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates. Sci Rep, 14, 2024
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8Y11
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