4O87
| Crystal structure of a N-tagged Nuclease | 分子名称: | CITRIC ACID, N-tagged Nuclease, SULFATE ION | 著者 | Chakravarty, A.K, Smith, P, Shuman, S. | 登録日 | 2013-12-26 | 公開日 | 2014-10-15 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structure, mechanism, and specificity of a eukaryal tRNA restriction enzyme involved in self-nonself discrimination. Cell Rep, 7, 2014
|
|
4O88
| Crystal structure of a C-tagged Nuclease | 分子名称: | CHLORIDE ION, N-tagged Nuclease, SULFATE ION | 著者 | Chakravarty, A.K, Smith, P, Shuman, S. | 登録日 | 2013-12-26 | 公開日 | 2014-10-15 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structure, mechanism, and specificity of a eukaryal tRNA restriction enzyme involved in self-nonself discrimination. Cell Rep, 7, 2014
|
|
4QM6
| Structure of bacterial polynucleotide kinase bound to GTP and RNA | 分子名称: | GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase, ... | 著者 | Das, U, Wang, L.K, Smith, P, Shuman, S. | 登録日 | 2014-06-15 | 公開日 | 2014-10-08 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structures of bacterial polynucleotide kinase in a michaelis complex with nucleoside triphosphate (NTP)-Mg2+ and 5'-OH RNA and a mixed substrate-product complex with NTP-Mg2+ and a 5'-phosphorylated oligonucleotide. J.Bacteriol., 196, 2014
|
|
4QM7
| Structure of bacterial polynucleotide kinase bound to GTP and pDNA | 分子名称: | DNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Das, U, Wang, L.K, Smith, P, Shuman, S. | 登録日 | 2014-06-15 | 公開日 | 2014-10-08 | 最終更新日 | 2015-02-18 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structures of bacterial polynucleotide kinase in a michaelis complex with nucleoside triphosphate (NTP)-Mg2+ and 5'-OH RNA and a mixed substrate-product complex with NTP-Mg2+ and a 5'-phosphorylated oligonucleotide. J.Bacteriol., 196, 2014
|
|
3TUX
| Crystal structure of RtcA.ATP.Mn ternary complex | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ... | 著者 | Chakravarty, A.K, Smith, P, Shuman, S. | 登録日 | 2011-09-19 | 公開日 | 2011-12-28 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
3TUT
| Crystal structure of RtcA.ATP binary complex | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ... | 著者 | Chakravarty, A.K, Smith, P, Shuman, S. | 登録日 | 2011-09-18 | 公開日 | 2011-12-28 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.58 Å) | 主引用文献 | Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
1M1S
| Structure of WR4, a C.elegans MSP family member | 分子名称: | WR4 | 著者 | Karpowich, N, Smith, P, Shen, J, Hunt, J, Montelione, G, Northeast Structural Genomics Consortium (NESG) | 登録日 | 2002-06-20 | 公開日 | 2003-07-29 | 最終更新日 | 2019-07-24 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of a C.elegans MSP family member To be Published
|
|
3TA5
| Cobalt bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family | 分子名称: | ATP-dependent DNA ligase, N-terminal domain protein, COBALT (II) ION, ... | 著者 | Das, U, Smith, P, Shuman, S. | 登録日 | 2011-08-03 | 公開日 | 2011-10-12 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.52 Å) | 主引用文献 | Structural insights to the metal specificity of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family. Nucleic Acids Res., 40, 2012
|
|
4GP7
| Polynucleotide kinase | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, MAGNESIUM ION, ... | 著者 | Wang, L.K, Das, U, Smith, P, Shuman, S. | 登録日 | 2012-08-20 | 公開日 | 2012-11-14 | 最終更新日 | 2017-11-15 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure and mechanism of the polynucleotide kinase component of the bacterial Pnkp-Hen1 RNA repair system. Rna, 18, 2012
|
|
4GP6
| Polynucleotide kinase | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase | 著者 | Wang, L.K, Das, U, Smith, P, Shuman, S. | 登録日 | 2012-08-20 | 公開日 | 2012-11-14 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structure and mechanism of the polynucleotide kinase component of the bacterial Pnkp-Hen1 RNA repair system. Rna, 18, 2012
|
|
3VD8
| Crystal structure of human AIM2 PYD domain with MBP fusion | 分子名称: | 1,2-ETHANEDIOL, Maltose-binding periplasmic protein, Interferon-inducible protein AIM2, ... | 著者 | Jin, T.C, Perry, A, Smith, P, Xiao, T.S. | 登録日 | 2012-01-04 | 公開日 | 2013-01-16 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (2.0685 Å) | 主引用文献 | Structure of the Absent in Melanoma 2 (AIM2) Pyrin Domain Provides Insights into the Mechanisms of AIM2 Autoinhibition and Inflammasome Assembly. J.Biol.Chem., 288, 2013
|
|
3TA7
| Zinc bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family | 分子名称: | ATP-dependent DNA ligase, N-terminal domain protein, DI(HYDROXYETHYL)ETHER, ... | 著者 | Das, U, Smith, P, Shuman, S. | 登録日 | 2011-08-03 | 公開日 | 2011-10-12 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Structural insights to the metal specificity of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family. Nucleic Acids Res., 40, 2012
|
|
3TV1
| Crystal structure of RtcA.AMP product complex | 分子名称: | 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ... | 著者 | Chakravarty, A.K, Smith, P, Shuman, S. | 登録日 | 2011-09-19 | 公開日 | 2011-12-28 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
3TW3
| Crystal structure of RtcA.ATP.Co ternary complex | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, RNA 3'-terminal phosphate cyclase, ... | 著者 | Chakravarty, A.K, Smith, P, Shuman, S. | 登録日 | 2011-09-21 | 公開日 | 2011-12-28 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
4IRL
| X-ray structure of the CARD domain of zebrafish GBP-NLRP1 like protein | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... | 著者 | Jin, T, Huang, M, Smith, P, Xiao, T. | 登録日 | 2013-01-15 | 公開日 | 2013-08-07 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.47 Å) | 主引用文献 | Structure of the caspase-recruitment domain from a zebrafish guanylate-binding protein. Acta Crystallogr.,Sect.F, 69, 2013
|
|
4JSY
| Structure of Clostridium thermocellum polynucleotide kinase bound to GTP | 分子名称: | GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase | 著者 | Das, U, Wang, L.K, Smith, P, Shuman, S. | 登録日 | 2013-03-22 | 公開日 | 2013-08-28 | 最終更新日 | 2013-12-18 | 実験手法 | X-RAY DIFFRACTION (2.14 Å) | 主引用文献 | Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system. Biochemistry, 52, 2013
|
|
4JT2
| Structure of Clostridium thermocellum polynucleotide kinase bound to CTP | 分子名称: | CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase | 著者 | Das, U, Wang, L.K, Smith, P, Shuman, S. | 登録日 | 2013-03-22 | 公開日 | 2013-08-28 | 最終更新日 | 2013-12-18 | 実験手法 | X-RAY DIFFRACTION (2.49 Å) | 主引用文献 | Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system. Biochemistry, 52, 2013
|
|
4JST
| Structure of Clostridium thermocellum polynucleotide kinase bound to UTP | 分子名称: | MAGNESIUM ION, Metallophosphoesterase, SODIUM ION, ... | 著者 | Das, U, Wang, L.K, Smith, P, Shuman, S. | 登録日 | 2013-03-22 | 公開日 | 2013-08-28 | 最終更新日 | 2013-12-18 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system. Biochemistry, 52, 2013
|
|
4JT4
| Structure of Clostridium thermocellum polynucleotide kinase bound to dATP | 分子名称: | 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, Metallophosphoesterase, ... | 著者 | Das, U, Wang, L.K, Smith, P, Shuman, S. | 登録日 | 2013-03-22 | 公開日 | 2013-08-28 | 最終更新日 | 2013-12-18 | 実験手法 | X-RAY DIFFRACTION (2.01 Å) | 主引用文献 | Structural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system. Biochemistry, 52, 2013
|
|
4J6O
| Crystal Structure of the Phosphatase Domain of C. thermocellum (Bacterial) PnkP | 分子名称: | CITRIC ACID, GLYCEROL, MANGANESE (II) ION, ... | 著者 | Wang, L, Smith, P, Shuman, S. | 登録日 | 2013-02-11 | 公開日 | 2013-04-10 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structure and mechanism of the 2',3' phosphatase component of the bacterial Pnkp-Hen1 RNA repair system. Nucleic Acids Res., 41, 2013
|
|
4MDE
| Structure of bacterial polynucleotide kinase product complex bound to GDP and DNA | 分子名称: | DNA (5'-D(P*CP*CP*TP*GP*T)-3'), GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Shuman, S, Das, U, Wang, L.K, Smith, P, Jacewicz, A. | 登録日 | 2013-08-22 | 公開日 | 2013-11-06 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structures of bacterial polynucleotide kinase in a Michaelis complex with GTP*Mg2+ and 5'-OH oligonucleotide and a product complex with GDP*Mg2+ and 5'-PO4 oligonucleotide reveal a mechanism of general acid-base catalysis and the determinants of phosphoacceptor recognition. Nucleic Acids Res., 42, 2014
|
|
4MDF
| Structure of bacterial polynucleotide kinase Michaelis complex bound to GTP and DNA | 分子名称: | CITRIC ACID, DNA (5'-D(*CP*CP*TP*GP*T)-3'), GUANOSINE-5'-TRIPHOSPHATE, ... | 著者 | Shuman, S, Das, U, Wang, L.K, Smith, P, Jacewicz, A. | 登録日 | 2013-08-22 | 公開日 | 2013-11-06 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.727 Å) | 主引用文献 | Structures of bacterial polynucleotide kinase in a Michaelis complex with GTP*Mg2+ and 5'-OH oligonucleotide and a product complex with GDP*Mg2+ and 5'-PO4 oligonucleotide reveal a mechanism of general acid-base catalysis and the determinants of phosphoacceptor recognition. Nucleic Acids Res., 42, 2014
|
|
3N9D
| Monoclinic Structure of P. aeruginosa LigD phosphoesterase domain | 分子名称: | MANGANESE (II) ION, Probable ATP-dependent DNA ligase, SULFATE ION, ... | 著者 | Shuman, S, Nair, P, Smith, P. | 登録日 | 2010-05-28 | 公開日 | 2010-08-11 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure of bacterial LigD 3'-phosphoesterase unveils a DNA repair superfamily Proc.Natl.Acad.Sci.USA, 107, 2010
|
|
3N9B
| Crystal Structure of the P. aeruginosa LigD phosphoesterase domain | 分子名称: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ... | 著者 | Shuman, S, Nair, P, Smith, P. | 登録日 | 2010-05-28 | 公開日 | 2010-08-11 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | 主引用文献 | Structure of bacterial LigD 3'-phosphoesterase unveils a DNA repair superfamily Proc.Natl.Acad.Sci.USA, 107, 2010
|
|
3OQ2
| Structure of a CRISPR associated protein Cas2 from Desulfovibrio vulgaris | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, CITRIC ACID, ... | 著者 | Samai, P, Smith, P, Shuman, S. | 登録日 | 2010-09-02 | 公開日 | 2010-12-22 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Structure of a CRISPR-associated protein Cas2 from Desulfovibrio vulgaris. Acta Crystallogr.,Sect.F, 66, 2010
|
|