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3LVM
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BU of 3lvm by Molmil
Crystal Structure of E.coli IscS
分子名称: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
著者Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-02-22
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010
3PNO
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BU of 3pno by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56N)
分子名称: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNK
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BU of 3pnk by Molmil
Crystal Structure of E.coli Dha kinase DhaK
分子名称: GLYCEROL, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNQ
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BU of 3pnq by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56N) complex with Dha
分子名称: Dihydroxyacetone, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PNM
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BU of 3pnm by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56A)
分子名称: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
著者Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2010-11-19
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
5VI0
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BU of 5vi0 by Molmil
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
分子名称: DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3'), SODIUM ION, ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
5VHV
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BU of 5vhv by Molmil
Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an oxocarbenium-intermediate analog
分子名称: (2R,5R,13R,16R)-9-(hydroxymethyl)-9-{[(2R)-2-hydroxypropoxy]methyl}-5,13-dimethyl-4,7,11,14-tetraoxaheptadecane-2,16-diol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
4HE0
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BU of 4he0 by Molmil
Crystal structure of human muscle fructose-1,6-bisphosphatase
分子名称: CHLORIDE ION, Fructose-1,6-bisphosphatase isozyme 2, MAGNESIUM ION, ...
著者Shi, R, Zhu, D.W, Lin, S.X.
登録日2012-10-03
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal Structures of Human Muscle Fructose-1,6-Bisphosphatase: Novel Quaternary States, Enhanced AMP Affinity, and Allosteric Signal Transmission Pathway.
Plos One, 8, 2013
4EEC
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BU of 4eec by Molmil
Crystal Structure of the glycopeptide antibiotic sulfotransferase StaL complexed with A3P and desulfo-A47934.
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, StaL, desulfo-A47934
著者Shi, R, Cygler, M.
登録日2012-03-28
公開日2012-07-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of sulfonation of the glycopeptide antibiotic scaffold by the sulfotransferase StaL
Proc.Natl.Acad.Sci.USA, 2012
4HE2
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BU of 4he2 by Molmil
Crystal structure of human muscle fructose-1,6-bisphosphatase Q32R mutant complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Fructose-1,6-bisphosphatase isozyme 2, ...
著者Shi, R, Zhu, D.W, Lin, S.X.
登録日2012-10-03
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structures of Human Muscle Fructose-1,6-Bisphosphatase: Novel Quaternary States, Enhanced AMP Affinity, and Allosteric Signal Transmission Pathway.
Plos One, 8, 2013
4HE1
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BU of 4he1 by Molmil
Crystal structure of human muscle fructose-1,6-bisphosphatase Q32R mutant complex with fructose-6-phosphate and phosphate
分子名称: 6-O-phosphono-beta-D-fructofuranose, CHLORIDE ION, Fructose-1,6-bisphosphatase isozyme 2, ...
著者Shi, R, Zhu, D.W, Lin, S.X.
登録日2012-10-03
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal Structures of Human Muscle Fructose-1,6-Bisphosphatase: Novel Quaternary States, Enhanced AMP Affinity, and Allosteric Signal Transmission Pathway.
Plos One, 8, 2013
4LRY
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BU of 4lry by Molmil
Crystal Structure of the E.coli DhaR(N)-DhaK(T79L) complex
分子名称: GLYCEROL, PTS-dependent dihydroxyacetone kinase operon regulatory protein, PTS-dependent dihydroxyacetone kinase, ...
著者Shi, R, McDonald, L, Cygler, M, Ekiel, I.
登録日2013-07-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Coiled-Coil Helix Rotation Selects Repressing or Activating State of Transcriptional Regulator DhaR.
Structure, 22, 2014
7D6I
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BU of 7d6i by Molmil
A neutralizing MAb targeting receptor-binding-domain of SARS-CoV-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of GH12-Fab, Light chain of GH12-Fab, ...
著者Shi, R, Qi, J.X, Gao, G.F, Yan, J.H.
登録日2020-09-30
公開日2021-10-13
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献A neutralizing MAb targeting receptor-binding-domain of SARS-CoV-2
To Be Published
1QYX
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BU of 1qyx by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstenedione and NADP
分子名称: 4-ANDROSTENE-3-17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
著者Shi, R, Lin, S.X.
登録日2003-09-12
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYV
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BU of 1qyv by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with NADP
分子名称: Estradiol 17 beta-dehydrogenase 1, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Shi, R, Lin, S.X.
登録日2003-09-12
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYW
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BU of 1qyw by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstanedione and NADP
分子名称: 5ALPHA-ANDROSTAN-3,17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
著者Shi, R, Lin, S.X.
登録日2003-09-12
公開日2004-08-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
2OVF
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BU of 2ovf by Molmil
Crystal Structure of StaL-PAP complex
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, StaL
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2007-02-13
公開日2007-02-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of StaL, a glycopeptide antibiotic sulfotransferase from Streptomyces toyocaensis.
J.Biol.Chem., 282, 2007
7X63
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BU of 7x63 by Molmil
SARS-CoV-2-Beta-RBD and BD-236-GWP/P-VK antibody complex
分子名称: BD-236 Fab heavy chain, BD-236 Fab light chain, Spike protein S1
著者Shi, R, Wang, Y, Wu, Z, Han, X, Yan, J.
登録日2022-03-06
公開日2023-03-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献SARS-CoV-2-Beta-RBD and BD-236-GWP/P-VK antibody complex
To Be Published
7X66
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BU of 7x66 by Molmil
SARS-CoV-2-Omicron-RBD and BD-236-GWP/P-VK antibody complex
分子名称: BD-236 Fab heavy chain, BD-236 Fab light chain, Spike protein S1
著者Shi, R, Wang, Y, Wu, Z, Han, X, Yan, J.
登録日2022-03-06
公開日2023-03-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献SARS-CoV-2-Omicron-RBD and BD-236-GWP/P-VK antibody complex
To Be Published
7XIL
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BU of 7xil by Molmil
SARS-CoV-2-Beta-RBD and B38-GWP/P-VK antibody complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, B38 Fab heavy chain, B38 Fab light chain, ...
著者Shi, R, Wang, Y, Wu, Z, Han, X, Yan, J.
登録日2022-04-13
公開日2023-04-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献SARS-CoV-2-Beta-RBD and B38-GWP/P-VK antibody complex
To Be Published
7XIK
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BU of 7xik by Molmil
SARS-CoV-2-Omicron-RBD and B38-GWP/P-VK antibody complex
分子名称: B38 Fab heavy chain, B38 Fab light chain, Spike protein S1
著者Shi, R, Wang, Y, Wu, Z, Han, X, Yan, J.
登録日2022-04-13
公開日2023-04-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献SARS-CoV-2-Omicron-RBD and B38-GWP/P-VK antibody complex
To Be Published
1UDS
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BU of 1uds by Molmil
Crystal structure of the tRNA processing enzyme RNase PH R126A mutant from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
1UDN
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BU of 1udn by Molmil
Crystal structure of the tRNA processing enzyme RNase PH from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
1UDO
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BU of 1udo by Molmil
Crystal structure of the tRNA processing enzyme RNase PH R86A mutant from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
1UDQ
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BU of 1udq by Molmil
Crystal structure of the tRNA processing enzyme RNase PH T125A mutant from Aquifex aeolicus
分子名称: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
著者Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-02
公開日2003-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003

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