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4CS5
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BU of 4cs5 by Molmil
Crystal Structure of PCNA from Litopenaeus vannamei
分子名称: PROLIFERATING CELL NUCLEAR ANTIGEN
著者Carrasco-Miranda, J.S, Lopez-Zavala, A.A, De-La-Mora, E, Rudino-Pinera, E, Brieba, L.G, Sotelo-Mundo, R.R.
登録日2014-03-04
公開日2014-04-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of the Shrimp Proliferating Cell Nuclear Antigen: Structural Complementarity with Wssv DNA Polymerase Pip-Box.
Plos One, 9, 2014
5A6D
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BU of 5a6d by Molmil
Proliferating Cell Nuclear Antigen, PCNA, from Thermococcus gammatolerans
分子名称: DNA POLYMERASE SLIDING CLAMP
著者Venancio-Landeros, A, Cardona-Felix, C.S, Rudino-Pinera, E.
登録日2015-06-25
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cloning, recombinant production and crystallographic structure of Proliferating Cell Nuclear Antigen from radioresistant archaeon Thermococcus gammatolerans.
Biochem Biophys Rep, 8, 2016
7SO8
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BU of 7so8 by Molmil
Crystal structure of Glutathione S-Transferase from Shrimp Litopenaeus vannamei in complex with silver ions and a molecules of Glutathione binding in G-site and H-site
分子名称: GLUTATHIONE, Glutathione transferase, PENTAETHYLENE GLYCOL, ...
著者Escudero-Garcia, A, Rudino-Pinera, E, Miranda-Blancas, R.
登録日2021-10-29
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Inhibition of GST class Mu of the shrimp Litopenaeus vannamei by binding silver ions in H-site.
To Be Published
3EJ6
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BU of 3ej6 by Molmil
Neurospora Crassa Catalase-3 Crystal Structure
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Catalase-3, PROTOPORPHYRIN IX CONTAINING FE
著者Diaz, A, Valdes, V.-J, Rudino-Pinera, E, Horjales, E, Hansberg, W.
登録日2008-09-17
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-Function Relationships in Fungal Large-Subunit Catalases
J.Mol.Biol., 386, 2008
1JT9
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BU of 1jt9 by Molmil
Structure of the mutant F174A T form of the Glucosamine-6-Phosphate deaminase from E.coli
分子名称: Glucosamine-6-Phosphate deaminase
著者Bustos-Jaimes, I, Sosa-Peinado, A, Rudino-Pinera, E, Horjales, E, Calcagno, M.L.
登録日2001-08-20
公開日2002-02-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献On the role of the conformational flexibility of the active-site lid on the allosteric kinetics of glucosamine-6-phosphate deaminase.
J.Mol.Biol., 319, 2002
7KGC
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BU of 7kgc by Molmil
Crystal structure of a perchloric acid-soluble protein (PSP) from Trichomonas vaginalis at 1.95 A
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Putative translation initiation inhibitor
著者Diaz-Vilchis, A, Rudino-Pinera, E, Alvarez-Sanchez, M.E, Arreola, R.
登録日2020-10-16
公開日2021-10-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Putative New Role of Tv-PSP1 Recognizes IRE and ERE Hairpin Structures from Trichomonas vaginalis.
Pathogens, 12, 2023
8DWR
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BU of 8dwr by Molmil
Crystal structure of the L333V variant of catalase-peroxidase from Mycobacterium tuberculosis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Diaz-Vilchis, A, Uribe-Vazquez, B, Avila-Linares, A, Rudino-Pinera, E, Soberon, X.
登録日2022-08-01
公開日2023-08-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Characterization of a catalase-peroxidase variant (L333V-KatG) identified in an INH-resistant Mycobacterium tuberculosis clinical isolate.
Biochem Biophys Rep, 37, 2024
4UOH
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BU of 4uoh by Molmil
Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
著者Lopez-Zavala, A.A, Guevara-Hernandez, E, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R.
登録日2014-06-03
公開日2014-09-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates
Acta Crystallogr.,Sect.F, 79, 2014
6TYR
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BU of 6tyr by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 with a close conformation of its beta-hairpin
分子名称: CITRIC ACID, COPPER (II) ION, GLYCEROL, ...
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2019-08-09
公開日2020-08-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.813 Å)
主引用文献The beta-hairpin from the Thermus thermophilus HB27 laccase works as a pH-dependent switch to regulate laccase activity.
J.Struct.Biol., 213, 2021
4V1D
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BU of 4v1d by Molmil
Ternary complex among two human derived single chain antibody fragments and Cn2 toxin from scorpion Centruroides noxius.
分子名称: BETA-MAMMAL TOXIN CN2, SINGLE CHAIN ANTIBODY FRAGMENT LR, HEAVY CHAIN, ...
著者Riano-Umbarila, L, Serrano-Posada, H, Rojas-Trejo, S, Rudino-Pinera, E, Becerril, B.
登録日2014-09-25
公開日2015-10-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Optimal Neutralization of Centruroides Noxius Venom is Understood Through a Structural Complex between Two Antibody Fragments and the Cn2 Toxin.
J.Biol.Chem., 291, 2016
4V2L
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BU of 4v2l by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 3.4 MGy, focused in disulfide bonds.
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-10-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
4V2M
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BU of 4v2m by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 34 MGy, focused in disulfide bonds.
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-10-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.841 Å)
主引用文献Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
4V2N
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BU of 4v2n by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 85 MGy, focused in disulfide bonds
分子名称: ACETATE ION, SULFATE ION, THIOREDOXIN
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-10-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
5WHQ
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BU of 5whq by Molmil
Crystal structure of the catalase-peroxidase from Neurospora crassa at 2.9 A
分子名称: Catalase-peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Diaz-Vilchis, A, Vega-Garcia, V, Rudino-Pinera, E, Hansberg, W.
登録日2017-07-18
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure, kinetics, molecular and redox properties of a cytosolic and developmentally regulated fungal catalase-peroxidase.
Arch. Biochem. Biophys., 640, 2018
5WHS
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BU of 5whs by Molmil
Crystal structure of the catalase-peroxidase from Neurospora crassa at 2.6 A
分子名称: Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Diaz-Vilchis, A, Vega-Garcia, V, Rudino-Pinera, E, Hansberg, W.
登録日2017-07-18
公開日2018-01-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure, kinetics, molecular and redox properties of a cytosolic and developmentally regulated fungal catalase-peroxidase.
Arch. Biochem. Biophys., 640, 2018
4UOF
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BU of 4uof by Molmil
Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with dADP
分子名称: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
著者Lopez-Zavala, A.A, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R.
登録日2014-06-03
公開日2014-09-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Structure of Nucleoside Diphosphate Kinase from the Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates
Acta Crystallogr.,Sect.F, 79, 2014
4UOG
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BU of 4uog by Molmil
Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with dCDP
分子名称: DEOXYCYTIDINE DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
著者Lopez-Zavala, A.A, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R.
登録日2014-06-03
公開日2014-09-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates
Acta Crystallogr.,Sect.F, 79, 2014
4UM4
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BU of 4um4 by Molmil
STRUCTURE OF INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI IN COMPLEX WITH SULFATE
分子名称: INORGANIC PYROPHOSPHATASE, SULFATE ION
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-05-15
公開日2014-11-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献First attempts to crystallize a non-homogeneous sample of thioredoxin from Litopenaeus vannamei: What to do when you have diffraction data of a protein that is not the target?
Biochem Biophys Rep, 8, 2016
1SY7
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BU of 1sy7 by Molmil
Crystal structure of the catalase-1 from Neurospora crassa, native structure at 1.75A resolution.
分子名称: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Catalase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Diaz, A, Horjales, E, Rudino-Pinera, E, Arreola, R, Hansberg, W.
登録日2004-04-01
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Unusual Cys-Tyr covalent bond in a large catalase
J.Mol.Biol., 342, 2004
5AN1
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BU of 5an1 by Molmil
Crystallographic structure of the Glutathione S-Transferase from Litopenaeus vannamei complexed with Glutathione
分子名称: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
著者Juarez-Martinez, A.B, Sotelo-Mundo, R, Rudino-Pinera, E.
登録日2015-09-02
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a class-mu glutathione S-transferase from whiteleg shrimp Litopenaeus vannamei: structural changes in the xenobiotic binding H-site may alter the spectra of molecules bound.
J. Biochem. Mol. Toxicol., 31, 2017
5AFA
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BU of 5afa by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 complexed with Ag, crystal of the holoenzyme soaked for 30 m in 5 mM AgNO3 at 278 K.
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ...
著者Jimenez-Arroyo, N, Rudino-Pinera, E.
登録日2015-01-19
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.193 Å)
主引用文献Structural Function of the Methionine-Rich Beta-Hairpin in the Laccase for T. Thermophilus.
To be Published
6PWQ
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BU of 6pwq by Molmil
Crystal structure of Levansucrase from Bacillus subtilis mutant S164A at 2.6 A
分子名称: CALCIUM ION, GLYCEROL, Glycoside hydrolase family 68 protein, ...
著者Diaz-Vilchis, A, Rodriguez-Alegria, M.E, Ortiz-Soto, M.E, Rudino-Pinera, E, Lopez-Munguia, A.
登録日2019-07-23
公開日2020-07-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Implications of the mutation S164A on Bacillus subtilis levansucrase product specificity and insights into protein interactions acting upon levan synthesis.
Int.J.Biol.Macromol., 161, 2020
6Q29
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BU of 6q29 by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 with an open conformation of beta-hairpin (Average deposted dose 2.5 MGy)
分子名称: COPPER (II) ION, Laccase, TETRAETHYLENE GLYCOL, ...
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2019-08-07
公開日2020-08-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献The beta-hairpin from the Thermus thermophilus HB27 laccase works as a pH-dependent switch to regulate laccase activity.
J.Struct.Biol., 213, 2021
5K5K
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BU of 5k5k by Molmil
Crystal structure of laccasse from Thermus thermophilus HB27 (ascorbic acid 10 min)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Laccase
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-23
公開日2017-06-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
5K15
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Crystal structure of laccase from Thermus thermophilus HB27 (Cu2PO, 8 min)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Laccase
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-17
公開日2017-05-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published

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