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2D38
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The Crystal Structure of Flavin Reductase HpaC complexed with NADP+
分子名称: FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, hypothetical NADH-dependent FMN oxidoreductase
著者Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M.
登録日2005-09-26
公開日2006-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
2D37
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BU of 2d37 by Molmil
The Crystal Structure of Flavin Reductase HpaC complexed with NAD+
分子名称: FLAVIN MONONUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, hypothetical NADH-dependent FMN oxidoreductase
著者Okai, M, Kudo, N, Lee, W.C, Kamo, M, Nagata, K, Tanokura, M.
登録日2005-09-26
公開日2006-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
Biochemistry, 45, 2006
2YYS
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BU of 2yys by Molmil
Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
分子名称: GLYCEROL, Proline iminopeptidase-related protein
著者Okai, M, Miyauchi, Y, Ebihara, A, Lee, W.C, Nagata, K, Tanokura, M.
登録日2007-05-01
公開日2008-02-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
Proteins, 70, 2008
2ZZF
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BU of 2zzf by Molmil
Crystal structure of alanyl-tRNA synthetase without oligomerization domain
分子名称: Alanyl-tRNA synthetase, ZINC ION
著者Sokabe, M, Ose, T, Tokunaga, K, Nakamura, A, Nureki, O, Yao, M, Tanaka, I.
登録日2009-02-10
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structure of alanyl-tRNA synthetase with editing domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZZG
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BU of 2zzg by Molmil
Crystal structure of alanyl-tRNA synthetase in complex with 5''-O-(N-(L-alanyl)-sulfamyoxyl) adenine without oligomerization domain
分子名称: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, Alanyl-tRNA synthetase, ZINC ION
著者Sokabe, M, Ose, T, Tokunaga, K, Nakamura, A, Nureki, O, Yao, M, Tanaka, I.
登録日2009-02-10
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The structure of alanyl-tRNA synthetase with editing domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
2DCU
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BU of 2dcu by Molmil
Crystal structure of translation initiation factor aIF2betagamma heterodimer with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 beta subunit, ...
著者Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I.
登録日2006-01-16
公開日2006-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
2EK9
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BU of 2ek9 by Molmil
Aminopeptidase from Aneurinibacillus sp. strain AM-1 with Bestatin
分子名称: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Aminopeptidase, ISOPROPYL ALCOHOL, ...
著者Akioka, M, Nakano, H, Watanabe, K.
登録日2007-03-22
公開日2008-03-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural characterization of a novel bacterial aminopeptidase with an apical domain from aneurinibacillus sp. strain AM-1
To be published
2EK8
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Aminopeptidase from Aneurinibacillus sp. strain AM-1
分子名称: Aminopeptidase, ISOPROPYL ALCOHOL, ZINC ION
著者Akioka, M, Nakano, H, Watanabe, K.
登録日2007-03-22
公開日2008-03-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of a novel bacterial aminopeptidase with an apical domain from aneurinibacillus sp. strain AM-1
To be published
2D74
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BU of 2d74 by Molmil
Crystal structure of translation initiation factor aIF2betagamma heterodimer
分子名称: Translation initiation factor 2 beta subunit, Translation initiation factor 2 gamma subunit, ZINC ION
著者Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I.
登録日2005-11-16
公開日2006-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
7EN4
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BU of 7en4 by Molmil
Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.
分子名称: Ubiquitin carboxyl-terminal hydrolase YUH1
著者Okada, M, Tateishi, Y, Nojiri, E, Mikawa, T, Rajesh, S, Ogasawa, H, Ueda, T, Yagi, H, Kohno, T, Kigawa, T, Shimada, I, Guentert, P, Yutaka, I, Ikeya, T.
登録日2021-04-15
公開日2022-04-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Multi-state structure determination and dynamics analysis elucidate a new ubiquitin-recognition mechanism of yeast ubiquitin C-terminal hydrolase.
To Be Published
3WQ7
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BU of 3wq7 by Molmil
New crystal form of the hyperthermophilic family 12 endo-cellulase from Pyrococcus furiosus
分子名称: CALCIUM ION, Endoglucanase A, GLYCEROL
著者Kataoka, M, Ishikawa, K.
登録日2014-01-23
公開日2014-07-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A new crystal form of a hyperthermophilic endocellulase.
Acta Crystallogr.,Sect.F, 70, 2014
3WXP
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BU of 3wxp by Molmil
Structure of hyperthermophilic family 12 endocellulase (E197A) from Pyrococcus furiosus in complex with cellobiose
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
著者Kataoka, M, Ishikawa, K.
登録日2014-08-04
公開日2015-11-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structure of hyperthermophilic family 12 endocellulase mutant (E197A) from Pyrococcus furiosus in complex with cellobiose
To be Published
3WT3
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New crystal form of a hyperthermophilic endocellulase
分子名称: CALCIUM ION, Endoglucanase A, GLYCEROL
著者Kataoka, M, Ishikawa, K.
登録日2014-04-07
公開日2015-04-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A new crystal form of a hyperthermophilic endocellulase
To be Published
3WY6
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Structure of hyperthermophilic family 12 endocellulase (E197A) from Pyrococcus furiosus in complex with laminaribiose
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
著者Kataoka, M, Ishikawa, K.
登録日2014-08-20
公開日2015-09-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of hyperthermophilic family 12 endocellulase (E197A) from Pyrococcus furiosus in complex with laminaribiose
To be Published
3WQ0
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BU of 3wq0 by Molmil
Structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus in complex with gluco-oligosaccharide
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
著者Kataoka, M, Ishikawa, K.
登録日2014-01-21
公開日2015-02-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus in complex with gluco-oligosaccharide
To be Published
3WQ1
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BU of 3wq1 by Molmil
Structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus in complex with cello-oligosaccharide
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
著者Kataoka, M, Ishikawa, K.
登録日2014-01-21
公開日2015-02-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus in complex with cello-oligosaccharide
To be Published
3WR0
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BU of 3wr0 by Molmil
Structure of hyperthermophilic family 12 endocellulase mutant from Pyrococcus furiosus
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
著者Kataoka, M, Ishikawa, K.
登録日2014-02-06
公開日2015-03-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structure of hyperthermophilic family 12 endocellulase mutant from Pyrococcus furiosus
To be Published
1V7O
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BU of 1v7o by Molmil
Alanyl-tRNA synthetase editing domain homologue protein from Pyrococcus horikoshii
分子名称: alanyl-tRNA synthetase
著者Okada, A, Yao, M, Sokabe, M, Tanaka, I.
登録日2003-12-18
公開日2004-01-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Molecular basis of alanine discrimination in editing site
Proc.Natl.Acad.Sci.Usa, 102, 2005
3D7A
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BU of 3d7a by Molmil
Crystal structure of DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3
分子名称: UPF0201 protein PH1010
著者Shirokane, M, Miyazono, K.I, Sawano, Y, Tanokura, M.
登録日2008-05-20
公開日2008-12-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 74, 2008
3WP3
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Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus)
分子名称: Endo-1,4-beta-xylanase
著者Ishikawa, K, Inoue, H, Kataoka, M.
登録日2014-01-09
公開日2014-11-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structure of Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) GH family 11 xylanase
Appl Biochem Biotechnol., 174, 2014
3VGI
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BU of 3vgi by Molmil
The crystal structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
著者Kataoka, M, Kim, H.-W, Ishikawa, K.
登録日2011-08-11
公開日2012-09-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Atomic resolution of the crystal structure of the hyperthermophilic family 12 endocellulase and stabilizing role of the DxDxDG calcium-binding motif in Pyrococcus furiosus.
Febs Lett., 586, 2012
3WQH
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BU of 3wqh by Molmil
Crystal Structure of human DPP-IV in complex with Anagliptin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase 4, N-[2-({2-[(2S)-2-cyanopyrrolidin-1-yl]-2-oxoethyl}amino)-2-methylpropyl]-2-methylpyrazolo[1,5-a]pyrimidine-6-carboxamide
著者Watanabe, Y.S, Okada, S, Motoyama, T, Takahashi, R, Adachi, H, Oka, M.
登録日2014-01-27
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Anagliptin, a potent dipeptidyl peptidase IV inhibitor: its single-crystal structure and enzyme interactions.
J Enzyme Inhib Med Chem, 30, 2015
2AGT
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BU of 2agt by Molmil
Aldose Reductase Mutant Leu 300 Pro complexed with Fidarestat
分子名称: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ...
著者Petrova, T, Steuber, H, Hazemann, I, Cousido-Siah, A, Mitschler, A, Chung, R, Oka, M, Klebe, G, El-Kabbani, O, Joachimiak, A, Podjarny, A.
登録日2005-07-27
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Factorizing Selectivity Determinants of Inhibitor Binding toward Aldose and Aldehyde Reductases: Structural and Thermodynamic Properties of the Aldose Reductase Mutant Leu300Pro-Fidarestat Complex
J.Med.Chem., 48, 2005
7F1I
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Designed enzyme RA61 M48K/I72D mutant: form II
分子名称: Engineered Retroaldolase
著者Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
登録日2021-06-09
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022
7F1H
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Designed enzyme RA61 M48K/I72D mutant: form I
分子名称: Engineered Retroaldolase, FORMIC ACID, GLYCEROL
著者Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
登録日2021-06-09
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022

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