2ZW5
 
 | |
2ZW4
 | |
3WWT
 | |
5IP3
 | | Tomato spotted wilt tospovirus nucleocapsid protein-ssDNA complex | | 分子名称: | DNA (5'-D(P*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3'), ... | | 著者 | Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M. | | 登録日 | 2016-03-09 | | 公開日 | 2017-03-22 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (3 Å) | | 主引用文献 | Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
J. Virol., 91, 2017
|
|
5IP1
 | | Tomato spotted wilt tospovirus nucleocapsid protein | | 分子名称: | Nucleoprotein | | 著者 | Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M. | | 登録日 | 2016-03-09 | | 公開日 | 2017-03-22 | | 最終更新日 | 2018-03-21 | | 実験手法 | X-RAY DIFFRACTION (2.703 Å) | | 主引用文献 | Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
J. Virol., 91, 2017
|
|
5IP2
 | | Tomato spotted wilt tospovirus nucleocapsid protein-ssRNA complex | | 分子名称: | Nucleoprotein, RNA (5'-D(P*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | | 著者 | Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M. | | 登録日 | 2016-03-09 | | 公開日 | 2017-03-22 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | | 主引用文献 | Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
J. Virol., 91, 2017
|
|
2DDE
 | | Structure of cinnamycin complexed with lysophosphatidylethanolamine | | 分子名称: | (7S)-4,7-DIHYDROXY-10-OXO-3,5,9-TRIOXA-4-PHOSPHAUNDECAN-1-AMINIUM 4-OXIDE, LANTIBIOTIC CINNAMYCIN | | 著者 | Hosoda, K, Ohya, M, Kohno, T, Maeda, T, Endo, S, Wakamatsu, K. | | 登録日 | 2006-01-27 | | 公開日 | 2006-02-21 | | 最終更新日 | 2024-07-10 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure determination of an immunopotentiator peptide, cinnamycin, complexed with lysophosphatidylethanolamine by 1H-NMR1.
J.Biochem., 119, 1996
|
|
6LE4
 | |
6LDO
 | |
8WKO
 | |
8WKR
 | |
7DC0
 | |
7DC4
 | | Crystal structure of glycan-bound Pseudomonas taiwanensis lectin | | 分子名称: | Lectin, SULFATE ION, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose | | 著者 | Oda, K, Matoba, Y. | | 登録日 | 2020-10-23 | | 公開日 | 2021-04-28 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (0.95 Å) | | 主引用文献 | Lectins engineered to favor a glycan-binding conformation have enhanced antiviral activity.
J.Biol.Chem., 296, 2021
|
|
7CIT
 | |
7CIY
 | |
1IRZ
 | |
1NLU
 | | Pseudomonas sedolisin (serine-carboxyl proteinase) complexed with two molecules of pseudo-iodotyrostatin | | 分子名称: | CALCIUM ION, PSEUDO-IODOTYROSTATIN, SEDOLISIN | | 著者 | Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Glodfarb, N.E, Dunn, B.M, Oda, K. | | 登録日 | 2003-01-07 | | 公開日 | 2004-01-20 | | 最終更新日 | 2012-12-12 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Two inhibitor molecules bound in the active site of Pseudomonas sedolisin: a model for the bi-product complex following cleavage of a peptide substrate.
Biochem.Biophys.Res.Commun., 314, 2004
|
|
2IFW
 | | Crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor | | 分子名称: | ACETIC ACID, GLYCEROL, Heptapeptide, ... | | 著者 | Pillai, B, Cherney, M.M, Hiraga, K, Takada, K, Oda, K, James, M.N. | | 登録日 | 2006-09-21 | | 公開日 | 2006-10-03 | | 最終更新日 | 2023-08-30 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structure of scytalidoglutamic peptidase with its first potent inhibitor provides insights into substrate specificity and catalysis.
J.Mol.Biol., 365, 2007
|
|
2IFR
 | | Crystal structure of Scytalido-glutamic peptidase with a peptide based transition state analog | | 分子名称: | ACETIC ACID, Octapeptide, Scytalidopepsin B | | 著者 | Pillai, B, Cherney, M.M, Hiraga, K, Takada, K, Oda, K, James, M.N. | | 登録日 | 2006-09-21 | | 公開日 | 2006-10-03 | | 最終更新日 | 2024-07-10 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Crystal structure of scytalidoglutamic peptidase with its first potent inhibitor provides insights into substrate specificity and catalysis.
J.Mol.Biol., 365, 2007
|
|
6M9C
 | | PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Pseudotyrostatin | | 分子名称: | ACETIC ACID, CALCIUM ION, Pseudotyrostatin, ... | | 著者 | Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K. | | 登録日 | 2018-08-23 | | 公開日 | 2018-10-24 | | 最終更新日 | 2024-07-10 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
|
|
6M9D
 | | PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Chymostatin | | 分子名称: | CALCIUM ION, Chymostatin A, SEDOLISIN | | 著者 | Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K. | | 登録日 | 2018-08-23 | | 公開日 | 2018-10-24 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
|
|
6M9F
 | | PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Tyrostatin | | 分子名称: | CALCIUM ION, SEDOLISIN, SULFATE ION, ... | | 著者 | Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K. | | 登録日 | 2018-08-23 | | 公開日 | 2018-10-24 | | 最終更新日 | 2024-07-10 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
|
|
6M8Y
 | | PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIPF | | 分子名称: | AIPF PEPTIDE INHIBITOR, CALCIUM ION, CHLORIDE ION, ... | | 著者 | Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K. | | 登録日 | 2018-08-22 | | 公開日 | 2018-10-24 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | | 主引用文献 | Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
|
|
6M8W
 | | PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIAF | | 分子名称: | AIAF PEPTIDE INHIBITOR, CALCIUM ION, CHLORIDE ION, ... | | 著者 | Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K. | | 登録日 | 2018-08-22 | | 公開日 | 2018-10-24 | | 最終更新日 | 2019-12-04 | | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | | 主引用文献 | Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
|
|
1BHU
 | | THE 3D STRUCTURE OF THE STREPTOMYCES METALLOPROTEINASE INHIBITOR, SMPI, ISOLATED FROM STREPTOMYCES NIGRESCENS TK-23, NMR, MINIMIZED AVERAGE STRUCTURE | | 分子名称: | METALLOPROTEINASE INHIBITOR | | 著者 | Tate, S, Ohno, A, Seeram, S.S, Hiraga, K, Oda, K, Kainosho, M. | | 登録日 | 1998-06-10 | | 公開日 | 1999-01-06 | | 最終更新日 | 2022-02-16 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: another example of an ancestral beta gamma-crystallin precursor structure.
J.Mol.Biol., 282, 1998
|
|
