Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1GEB
DownloadVisualize
BU of 1geb by Molmil
X-RAY CRYSTAL STRUCTURE AND CATALYTIC PROPERTIES OF THR252ILE MUTANT OF CYTOCHROME P450CAM
分子名称: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
著者Hishiki, T, Shimada, H, Nagano, S, Park, S.-Y, Ishimura, Y.
登録日2000-11-01
公開日2000-11-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献X-ray crystal structure and catalytic properties of Thr252Ile mutant of cytochrome P450cam: roles of Thr252 and water in the active center.
J.Biochem., 128, 2000
3O0R
DownloadVisualize
BU of 3o0r by Molmil
Crystal structure of nitric oxide reductase from Pseudomonas aeruginosa in complex with antibody fragment
分子名称: CALCIUM ION, FE (III) ION, HEME C, ...
著者Hino, T, Matsumoto, Y, Nagano, S, Sugimoto, H, Fukumori, Y, Murata, T, Iwata, S, Shiro, Y.
登録日2010-07-20
公開日2010-12-29
最終更新日2013-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of biological N2O generation by bacterial nitric oxide reductase
Science, 330, 2010
5XB8
DownloadVisualize
BU of 5xb8 by Molmil
Crystal structure of dibenzothiophene monooxygenase (TdsC) from Paenibacillus sp. A11-2
分子名称: SULFATE ION, Thermophilic dibenzothiophene desulfurization enzyme C
著者Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
登録日2017-03-16
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.795 Å)
主引用文献Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
5XDD
DownloadVisualize
BU of 5xdd by Molmil
Crystal structure of tertiary complex of TdsC from Paenibacillus sp. A11-2 with FMN and Indole
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, INDOLE, ...
著者Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
登録日2017-03-28
公開日2017-08-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
5XDC
DownloadVisualize
BU of 5xdc by Molmil
Crystal structure of Indole-bound TdsC from Paenibacillus sp. A11-2
分子名称: GLYCEROL, INDOLE, SULFATE ION, ...
著者Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
登録日2017-03-28
公開日2017-08-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5785 Å)
主引用文献Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
5XDB
DownloadVisualize
BU of 5xdb by Molmil
Crystal structure of FMN-bound TdsC from Paenibacillus sp. A11-2
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, SULFATE ION, ...
著者Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
登録日2017-03-28
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.811 Å)
主引用文献Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
8HD2
DownloadVisualize
BU of 8hd2 by Molmil
Crystal structure of SAM dependent methyltransferase encoded in type II fatty acid biosynthesis gene cluster from ladderane lipid producing anammox bacteria
分子名称: Methyltransf_25 domain-containing protein, S-ADENOSYL-L-HOMOCYSTEINE
著者Uegaki, T, Nagano, S, Hino, T.
登録日2022-11-03
公開日2023-05-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Anammox Bacterial S -Adenosyl-l-Methionine Dependent Methyltransferase Crystal Structure and Its Interaction with Acyl Carrier Proteins.
Int J Mol Sci, 24, 2023
7E5V
DownloadVisualize
BU of 7e5v by Molmil
Crystal structure of Phm7 in complex with inhibitor
分子名称: Diels-Alderase, GLYCEROL, SULFATE ION, ...
著者Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
登録日2021-02-20
公開日2021-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E5U
DownloadVisualize
BU of 7e5u by Molmil
Crystal structure of Phm7
分子名称: CHLORIDE ION, Diels-Alderase, GLYCEROL, ...
著者Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
登録日2021-02-20
公開日2021-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E5T
DownloadVisualize
BU of 7e5t by Molmil
Crystal structure of Fsa2
分子名称: Diels-Alderase fsa2, ETHANOL, PENTAETHYLENE GLYCOL, ...
著者Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
登録日2021-02-20
公開日2021-06-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.16977525 Å)
主引用文献Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7W8V
DownloadVisualize
BU of 7w8v by Molmil
DMSPP- and Trp-bound 6-dimethylallyl tryptophan synthase, IptA
分子名称: 6-dimethylallyltryptophan synthase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, SULFATE ION, ...
著者Suemune, H, Nagano, S, Tomoya, H.
登録日2021-12-08
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity.
Biochem.Biophys.Res.Commun., 593, 2022
7W8W
DownloadVisualize
BU of 7w8w by Molmil
DMSPP- and 5-Me-Trp-bound 6-dimethylallyl tryptophan synthase, IptA
分子名称: 5-methyl-L-tryptophan, 6-dimethylallyltryptophan synthase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ...
著者Suemune, H, Nagano, S, Tomoya, H.
登録日2021-12-08
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity.
Biochem.Biophys.Res.Commun., 593, 2022
7W8Y
DownloadVisualize
BU of 7w8y by Molmil
DMSPP- and Naplha-Me-Trp-bound 6-dimethylallyl tryptophan synthase, IptA
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-dimethylallyltryptophan synthase, ...
著者Suemune, H, Nagano, S.
登録日2021-12-08
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity.
Biochem.Biophys.Res.Commun., 593, 2022
7W8U
DownloadVisualize
BU of 7w8u by Molmil
Crystal Structure of Indole Prenyltransferase IptA
分子名称: 6-dimethylallyltryptophan synthase
著者Suemune, H, Nagano, S.
登録日2021-12-08
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity.
Biochem.Biophys.Res.Commun., 593, 2022
7W8X
DownloadVisualize
BU of 7w8x by Molmil
DMSPP- and 6-Me-Trp-bound dimethylallyl tryptophan synthase, IptA
分子名称: (2S)-2-azanyl-3-(6-methyl-1H-indol-3-yl)propanoic acid, 6-dimethylallyltryptophan synthase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ...
著者Suemune, H, Nagano, S, Tomoya, H.
登録日2021-12-08
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structures of a 6-dimethylallyltryptophan synthase, IptA: Insights into substrate tolerance and enhancement of prenyltransferase activity.
Biochem.Biophys.Res.Commun., 593, 2022
6KOG
DownloadVisualize
BU of 6kog by Molmil
Ketosynthase domain in tenuazonic acid synthetase 1 (TAS1).
分子名称: GLYCEROL, Hybrid PKS-NRPS synthetase TAS1, SULFATE ION
著者Yun, C.S, Nishimoto, K, Motoyama, T, Hino, T, Nagano, S, Osada, H.
登録日2019-08-10
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Unique features of the ketosynthase domain in a nonribosomal peptide synthetase-polyketide synthase hybrid enzyme, tenuazonic acid synthetase 1.
J.Biol.Chem., 295, 2020
5XDE
DownloadVisualize
BU of 5xde by Molmil
Crystal structure of tertiary complex of TdsC from Paenibacillus sp. A11-2 with FMN and dibenzothiophene
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, SULFATE ION, ...
著者Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
登録日2017-03-28
公開日2017-08-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
5XDG
DownloadVisualize
BU of 5xdg by Molmil
Crystal structure of tertiary complex of TdsC from Paenibacillus sp. A11-2 with FMN and dibenzothiophene sulfoxide
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, SULFATE ION, ...
著者Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
登録日2017-03-28
公開日2017-08-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.747 Å)
主引用文献Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
6A17
DownloadVisualize
BU of 6a17 by Molmil
Crystal structure of CYP90B1 in complex with brassinazole
分子名称: (2R,3S)-4-(4-chlorophenyl)-2-phenyl-3-(1H-1,2,4-triazol-1-yl)butan-2-ol, CHLORIDE ION, Cytochrome P450 90B1, ...
著者Fujiyama, K, Hino, T, Kanadani, M, Mizutani, M, Nagano, S.
登録日2018-06-06
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural insights into a key step of brassinosteroid biosynthesis and its inhibition.
Nat.Plants, 5, 2019
6A15
DownloadVisualize
BU of 6a15 by Molmil
Structure of CYP90B1 in complex with cholesterol
分子名称: CHLORIDE ION, CHOLESTEROL, Cytochrome P450 90B1, ...
著者Fujiyama, K, Hino, T, Kanadani, M, Mizutani, M, Nagano, S.
登録日2018-06-06
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural insights into a key step of brassinosteroid biosynthesis and its inhibition.
Nat.Plants, 5, 2019
6A18
DownloadVisualize
BU of 6a18 by Molmil
Crystal structure of CYP90B1 in complex with 1,6-hexandiol
分子名称: CHLORIDE ION, Cytochrome P450 90B1, GLYCEROL, ...
著者Fujiyama, K, Hino, T, Kanadani, M, Mizutani, M, Nagano, S.
登録日2018-06-06
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural insights into a key step of brassinosteroid biosynthesis and its inhibition.
Nat.Plants, 5, 2019
6A16
DownloadVisualize
BU of 6a16 by Molmil
Crystal structure of CYP90B1 in complex with uniconazole
分子名称: (1E,3S)-1-(4-chlorophenyl)-4,4-dimethyl-2-(1H-1,2,4-triazol-1-yl)pent-1-en-3-ol, CHLORIDE ION, Cytochrome P450 90B1, ...
著者Fujiyama, K, Hino, T, Kanadani, M, Mizutani, M, Nagano, S.
登録日2018-06-06
公開日2019-06-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Structural insights into a key step of brassinosteroid biosynthesis and its inhibition.
Nat.Plants, 5, 2019
7VWS
DownloadVisualize
BU of 7vws by Molmil
Carbazole Prenyl Transferase LvqB4
分子名称: 2-methyl-1-[(2R)-2-oxidanylpropyl]-9H-carbazole-3,4-dione, LvqB4, MAGNESIUM ION, ...
著者Suemune, H, Nagata, R, Kuzuyama, T, Nagano, S.
登録日2021-11-11
公開日2022-03-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural Basis for the Prenylation Reaction of Carbazole-Containing Natural Products Catalyzed by Squalene Synthase-Like Enzymes.
Angew.Chem.Int.Ed.Engl., 61, 2022
7VWT
DownloadVisualize
BU of 7vwt by Molmil
Carbazole Prenyl Transferase CqsB4
分子名称: 2-methyl-1-[(2R)-2-oxidanylpropyl]-9H-carbazole-3,4-dione, CqsB4, DI(HYDROXYETHYL)ETHER, ...
著者Suemune, H, Nagata, R, Kuzuyama, T, Nagano, S.
登録日2021-11-11
公開日2022-03-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural Basis for the Prenylation Reaction of Carbazole-Containing Natural Products Catalyzed by Squalene Synthase-Like Enzymes.
Angew.Chem.Int.Ed.Engl., 61, 2022
2Z3U
DownloadVisualize
BU of 2z3u by Molmil
Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 StaP (CYP245A1)
分子名称: 1,2-ETHANEDIOL, 3,4-DI-1H-INDOL-3-YL-1H-PYRROLE-2,5-DICARBOXYLIC ACID, Cytochrome P450, ...
著者Makino, M, Sugimoto, H, Shiro, Y, Asamizu, S, Onaka, H, Nagano, S.
登録日2007-06-06
公開日2007-07-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures and catalytic mechanism of cytochrome P450 StaP that produces the indolocarbazole skeleton
Proc.Natl.Acad.Sci.Usa, 104, 2007

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon