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1IRQ
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BU of 1irq by Molmil
Crystal structure of omega transcriptional repressor at 1.5A resolution
分子名称: omega transcriptional repressor
著者Murayama, K, Orth, P, De La Hoz, A.B, Alonso, J.C, Saenger, W.
登録日2001-10-11
公開日2001-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of omega transcriptional repressor encoded by Streptococcus pyogenes plasmid pSM19035 at 1.5 A resolution.
J.Mol.Biol., 314, 2001
2DX1
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BU of 2dx1 by Molmil
Crystal structure of RhoGEF protein Asef
分子名称: Rho guanine nucleotide exchange factor 4
著者Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-22
公開日2007-01-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Crystal structure of the rac activator, Asef, reveals its autoinhibitory mechanism
J.Biol.Chem., 282, 2007
2CWP
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BU of 2cwp by Molmil
Crystal structure of MetRS related protein from Pyrococcus horikoshii
分子名称: MetRS related protein
著者Murayama, K, Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-23
公開日2005-12-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of MetRS related protein from Pyrococcus horikoshii
To be Published
2Z0T
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BU of 2z0t by Molmil
Crystal structure of hypothetical protein PH0355
分子名称: Putative uncharacterized protein PH0355
著者Murayama, K, Takemoto, C, Kato-Murayama, M, Kawazoe, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of hypothetical protein PH0355
To be Published
8YK5
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BU of 8yk5 by Molmil
Structure of glycerophosphoethanolamine ethanolaminephosphodiesterase from Streptomyces sanglieri
分子名称: CALCIUM ION, GLYCEROL, phospholipase C
著者Murayama, K, Sugimori, D.
登録日2024-03-04
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a phosphodiesterase from Streptomyces sanglieri with a novel C-terminal domain.
Biochem.Biophys.Res.Commun., 708, 2024
2Z0Y
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BU of 2z0y by Molmil
Crystal structure of TTHA0657-SAM complex
分子名称: Putative uncharacterized protein TTHA0657, S-ADENOSYLMETHIONINE
著者Murayama, K, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of TTHA0657-SAM complex
To be Published
1UFO
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BU of 1ufo by Molmil
Crystal Structure of TT1662 from Thermus thermophilus
分子名称: hypothetical protein TT1662
著者Murayama, K, Shirouzu, M, Terada, T, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-03
公開日2003-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of TT1662 from Thermus thermophilus HB8: a member of the alpha/beta hydrolase fold enzymes.
Proteins, 58, 2005
1V6Z
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BU of 1v6z by Molmil
Crystal structure of TT1573 from Thermus thermophilus
分子名称: hypothetical protein TTHA0657
著者Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-12-05
公開日2004-12-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of TT1573 from Thermus thermophilus
To be Published
1WDZ
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BU of 1wdz by Molmil
Crystal structure of RCB domain of IRSp53
分子名称: insulin receptor substrate p53
著者Murayama, K, Suetsugu, S, Seto, A, Shirouzu, M, Takenawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-21
公開日2005-06-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Crystal structure of RCB domain of IRSp53
TO BE PUBLISHED
2CX5
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BU of 2cx5 by Molmil
Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
分子名称: A PUTATIVE TRANS-EDITING ENZYME
著者Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
To be Published
2CX7
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BU of 2cx7 by Molmil
Crystal structure of sterol carrier protein 2
分子名称: PHOSPHATE ION, Sterol carrier protein 2
著者Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of sterol carrier protein 2
To be Published
2CX6
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BU of 2cx6 by Molmil
Crystal structure of ribonuclease inhibitor Barstar
分子名称: Hypothetical protein yhcO
著者Murayama, K, Kawazoe, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of ribonuclease inhibitor Barstar
To be Published
2CX8
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BU of 2cx8 by Molmil
Crystal structure of methyltransferase with ligand(SAH)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, methyl transferase
著者Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal structure of methyltransferase with ligand(SAH)
To be Published
2CX9
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BU of 2cx9 by Molmil
Crystal structure of acyl-CoA dehydrogenase
分子名称: CHLORIDE ION, acyl-CoA dehydrogenase
著者Murayama, K, Kinebuchi, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of acyl-CoA dehydrogenase
To be Published
4YN3
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BU of 4yn3 by Molmil
Crystal structure of Cucumisin complex with pro-peptide
分子名称: CHLORIDE ION, Cucumisin, DI(HYDROXYETHYL)ETHER, ...
著者Murayama, K, Kato-Murayama, M, Yokoyama, S, Arima, K, Shirouzu, M.
登録日2015-03-09
公開日2016-03-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis of cucumisin protease activity regulation by its propeptide
J. Biochem., 161, 2017
7EJL
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BU of 7ejl by Molmil
Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-2) spike protein
分子名称: 9-mer peptide from the HCoV spike protein, Beta-2-microglobulin, MHC class I antigen
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-04-02
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Identification of TCR repertoires in functionally competent cytotoxic T cells cross-reactive to SARS-CoV-2.
Commun Biol, 4, 2021
7EJN
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BU of 7ejn by Molmil
Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-HKU1) spike protein
分子名称: 9-mer peptide from the HCoV spike protein, Beta-2-microglobulin, MHC class I antigen
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-04-02
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Identification of TCR repertoires in functionally competent cytotoxic T cells cross-reactive to SARS-CoV-2.
Commun Biol, 4, 2021
7EJM
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BU of 7ejm by Molmil
Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-229E) spike protein
分子名称: 9-mer peptide from the HCoV spike protein, Beta-2-microglobulin, MHC class I antigen
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-04-02
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Identification of TCR repertoires in functionally competent cytotoxic T cells cross-reactive to SARS-CoV-2.
Commun Biol, 4, 2021
7VS9
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BU of 7vs9 by Molmil
Crystal structure of P domain from norovirus GI.9 capsid protein in complex with Lewis x antigen.
分子名称: CHLORIDE ION, MAGNESIUM ION, VP1, ...
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-10-26
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Lewis fucose is a key moiety for the recognition of histo-blood group antigens by GI.9 norovirus, as revealed by structural analysis.
Febs Open Bio, 12, 2022
7VS8
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BU of 7vs8 by Molmil
Crystal structure of P domain from norovirus GI.9 capsid protein in complex with Lewis b antigen.
分子名称: CHLORIDE ION, MAGNESIUM ION, VP1, ...
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-10-26
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Lewis fucose is a key moiety for the recognition of histo-blood group antigens by GI.9 norovirus, as revealed by structural analysis.
Febs Open Bio, 12, 2022
2Z0Z
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BU of 2z0z by Molmil
Crystal structure of putative acetyltransferase
分子名称: Putative uncharacterized protein TTHA1799, SULFATE ION
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
2ZXV
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BU of 2zxv by Molmil
Crystal structure of putative acetyltransferase from T. thermophilus HB8
分子名称: Putative uncharacterized protein TTHA1799
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-01-08
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
2Z10
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BU of 2z10 by Molmil
Crystal structure of putative acetyltransferase
分子名称: Ribosomal-protein-alanine acetyltransferase
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
7YMQ
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BU of 7ymq by Molmil
Crystal structure of lysoplasmalogen specific phopholipase D, F211L mutant
分子名称: Lysoplasmalogenase
著者Murayama, K, Kato-Murayama, M, Sugimori, D, Shirouzu, M, Hamana, H.
登録日2022-07-29
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668.
Biosci.Biotechnol.Biochem., 87, 2022
7YMR
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BU of 7ymr by Molmil
Complex structure of lysoplasmalogen specific phopholipase D, F211L mutant with LPC
分子名称: Lysoplasmalogenase, [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{5}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate
著者Murayama, K, Kato-Murayama, M, Sugimori, D, Shirouzu, M, Hamana, H.
登録日2022-07-29
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668.
Biosci.Biotechnol.Biochem., 87, 2022

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