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5KY8
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BU of 5ky8 by Molmil
mouse POFUT1 in complex with O-glucosylated mouse Notch1 EGF12 mutant (D464G) and GDP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GDP-fucose protein O-fucosyltransferase 1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Li, Z, Rini, J.M.
登録日2016-07-21
公開日2017-05-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1.
Nat. Chem. Biol., 13, 2017
5KY3
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BU of 5ky3 by Molmil
mouse POFUT1 in complex with mouse Factor VII EGF1 mutant (T101A) and GDP-fucose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor VII, GDP-fucose protein O-fucosyltransferase 1, ...
著者Li, Z, Rini, J.M.
登録日2016-07-21
公開日2017-05-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1.
Nat. Chem. Biol., 13, 2017
5L0R
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BU of 5l0r by Molmil
human POGLUT1 in complex with Notch1 EGF12 and UDP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Li, Z, Rini, J.M.
登録日2016-07-28
公開日2017-08-09
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of Notch O-glucosylation and O-xylosylation by mammalian protein-O-glucosyltransferase 1 (POGLUT1).
Nat Commun, 8, 2017
5KY7
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BU of 5ky7 by Molmil
mouse POFUT1 in complex with O-glucosylated EGF(+) and GDP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, EGF(+), GDP-fucose protein O-fucosyltransferase 1, ...
著者Li, Z, Rini, J.M.
登録日2016-07-21
公開日2017-05-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1.
Nat. Chem. Biol., 13, 2017
5JFK
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BU of 5jfk by Molmil
Crystal structure of a TDR receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat receptor-like protein kinase TDR
著者Li, Z, Xu, G.
登録日2016-04-19
公開日2017-03-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.647 Å)
主引用文献Crystal structure of a TDR receptor
To Be Published
3KYS
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BU of 3kys by Molmil
Crystal structure of human YAP and TEAD complex
分子名称: 65 kDa Yes-associated protein, Transcriptional enhancer factor TEF-1
著者Li, Z, Zhao, B, Wang, P, Chen, F, Dong, Z, Yang, H, Guan, K.L, Xu, Y.
登録日2009-12-07
公開日2010-02-23
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the YAP and TEAD complex
Genes Dev., 24, 2010
8WWW
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BU of 8www by Molmil
Crystal structure of the adenylation domain of SyAstC
分子名称: Carrier domain-containing protein, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Li, Z, Zhu, Z, Zhu, D, Shen, Y.
登録日2023-10-27
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Functional Application of the Single-Module NRPS-like d-Alanyltransferase in Maytansinol Biosynthesis
Acs Catalysis, 14, 2024
5ZZ9
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BU of 5zz9 by Molmil
Crystal structure of Homer2 EVH1/Drebrin PPXXF complex
分子名称: Homer protein homolog 2, Peptide from Drebrin
著者Li, Z, Liu, H, Li, J, Liu, W, Zhang, M.
登録日2018-05-31
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Homer Tetramer Promotes Actin Bundling Activity of Drebrin.
Structure, 27, 2019
1QBY
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BU of 1qby by Molmil
THE SOLUTION STRUCTURE OF A BAY-REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
分子名称: 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP* G)-3'
著者Li, Z, Mao, H, Kim, H.-Y, Tamura, P.J, Harris, C.M, Harris, T.M, Stone, M.P.
登録日1999-04-27
公開日1999-05-06
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Intercalation of the (-)-(1R,2S,3R, 4S)-N6-[1-benz[a]anthracenyl]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
6MYL
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BU of 6myl by Molmil
The Prp8 intein-cisplatin complex
分子名称: PLATINUM (II) ION, Pre-mRNA-processing-splicing factor 8
著者Li, Z, Li, H.
登録日2018-11-01
公開日2019-11-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Cisplatin protects mice from challenge ofCryptococcus neoformansby targeting the Prp8 intein.
Emerg Microbes Infect, 8, 2019
5XJ9
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BU of 5xj9 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the orthophosphate form
分子名称: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Glycerol-3-phosphate acyltransferase, PHOSPHATE ION
著者Li, Z, Tang, Y, Li, D.
登録日2017-04-30
公開日2017-12-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
5XJ5
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BU of 5xj5 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the monoacylglycerol form
分子名称: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLYCINE, Glycerol-3-phosphate acyltransferase, ...
著者Li, Z, Li, D.
登録日2017-04-30
公開日2017-12-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.481 Å)
主引用文献Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
7C23
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BU of 7c23 by Molmil
Crystal structure of CrmE10, a SGNH-hydrolase family esterase
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Li, Z, Li, J.
登録日2020-05-07
公開日2020-05-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
7C29
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BU of 7c29 by Molmil
Esterase CrmE10 mutant-D178A
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Li, Z, Li, J.
登録日2020-05-07
公開日2020-05-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
7C82
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BU of 7c82 by Molmil
Crystal structure of AlinE4, a SGNH-hydrolase family esterase
分子名称: ACETATE ION, ALANINE, CADMIUM ION, ...
著者Li, Z, Li, J.
登録日2020-05-28
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
7C84
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BU of 7c84 by Molmil
Esterase AlinE4 mutant, D162A
分子名称: ACETATE ION, CADMIUM ION, GLYCEROL, ...
著者Li, Z, Li, J.
登録日2020-05-28
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.552 Å)
主引用文献Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
7C85
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BU of 7c85 by Molmil
Esterase AlinE4 mutant-S13A
分子名称: ACETATE ION, CADMIUM ION, SGNH-hydrolase family esterase
著者Li, Z, Li, J.
登録日2020-05-28
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
6U7H
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BU of 6u7h by Molmil
Cryo-EM structure of the HCoV-229E spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, Z, Benlekbir, S, Rubinstein, J.L, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
5BSW
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BU of 5bsw by Molmil
Crystal structure of 4-coumarate:CoA ligase delta-V341 mutant complexed with feruloyl adenylate
分子名称: 4-coumarate--CoA ligase 2, 5'-O-[(R)-hydroxy{[(2E)-3-(5-methoxy-4-oxocyclohexa-1,5-dien-1-yl)prop-2-enoyl]oxy}phosphoryl]adenosine
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
4ZNB
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BU of 4znb by Molmil
METALLO-BETA-LACTAMASE (C181S MUTANT)
分子名称: METALLO-BETA-LACTAMASE, SODIUM ION, ZINC ION
著者Li, Z, Herzberg, O.
登録日1998-10-20
公開日1999-06-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural consequences of the active site substitution Cys181 --> Ser in metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 8, 1999
8CWY
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BU of 8cwy by Molmil
Accurate computational design of genetically encoded 3D protein crystals
分子名称: T32-15-1, T32-15-2
著者Li, Z, Borst, A.J, Baker, D.
登録日2022-05-19
公開日2023-11-01
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Accurate computational design of three-dimensional protein crystals.
Nat Mater, 22, 2023
5BSR
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BU of 5bsr by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with adenosine monophosphate and Coenzyme A
分子名称: 4-coumarate--CoA ligase 2, ADENOSINE MONOPHOSPHATE, COENZYME A, ...
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
5BSV
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BU of 5bsv by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with feruloyl adenylate
分子名称: 4-coumarate--CoA ligase 2, 5'-O-[(R)-hydroxy{[(2E)-3-(5-methoxy-4-oxocyclohexa-1,5-dien-1-yl)prop-2-enoyl]oxy}phosphoryl]adenosine
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
5BSM
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BU of 5bsm by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with magnesium and Adenosine triphosphate
分子名称: 4-coumarate--CoA ligase 2, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
5BSU
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BU of 5bsu by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with caffeoyl adenylate
分子名称: 4-coumarate--CoA ligase 2, 5'-O-[(R)-{[(2E)-3-(3,4-dioxocyclohexa-1,5-dien-1-yl)prop-2-enoyl]oxy}(hydroxy)phosphoryl]adenosine, GLYCEROL, ...
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015

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