1WRN
 
 | | Metal Ion dependency of the antiterminator protein, HutP, for binding to the terminator region of hut mRNA- A structural basis | | 分子名称: | DI(HYDROXYETHYL)ETHER, HISTIDINE, Hut operon positive regulatory protein, ... | | 著者 | Kumarevel, T, Mizuno, H, Kumar, P.K.R. | | 登録日 | 2004-10-25 | | 公開日 | 2005-08-30 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Characterization of the metal ion binding site in the anti-terminator protein, HutP, of Bacillus subtilis
Nucleic Acids Res., 33, 2005
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3BOY
 | | Crystal structure of the HutP antitermination complex bound to the HUT mRNA | | 分子名称: | 5'-R(*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ... | | 著者 | Kumarevel, T.S, Balasundaresan, D, Jeyakanthan, J, Shinkai, A, Yokoyama, S, Kumar, P.K.R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-12-18 | | 公開日 | 2008-01-15 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal Structure of HutP complexed with the 55-mer RNA
To be Published
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1WPT
 | | Crystal Structure of HutP, an RNA binding anti-termination protein | | 分子名称: | Hut operon positive regulatory protein | | 著者 | Kumarevel, T, Mizuno, H, Kumar, P.K.R. | | 登録日 | 2004-09-13 | | 公開日 | 2005-08-30 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Characterization of the metal ion binding site in the anti-terminator protein, HutP, of Bacillus subtilis
Nucleic Acids Res., 33, 2005
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1WMQ
 | | Structure of the HutP antitermination complex bound to a single stranded region of hut mRNA | | 分子名称: | 5'-R(P*UP*UP*UP*AP*GP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ... | | 著者 | Kumarevel, T.S, Mizuno, H, Kumar, P.K.R. | | 登録日 | 2004-07-14 | | 公開日 | 2005-03-15 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Structural basis of HutP-mediated anti-termination and roles of the Mg2+ ion and L-histidine ligand.
Nature, 434, 2005
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1WPV
 | | Crystal Structure of Activated Binary complex of HutP, an RNA binding anti-termination protein | | 分子名称: | HISTIDINE, Hut operon positive regulatory protein, MAGNESIUM ION | | 著者 | Kumarevel, T.S, Mizuno, H, Kumar, P.K.R. | | 登録日 | 2004-09-14 | | 公開日 | 2005-03-15 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Structural basis of HutP-mediated anti-termination and roles of the Mg2+ ion and L-histidine ligand.
Nature, 434, 2005
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1WPU
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2IWV
 | | Structure of the monomeric outer membrane porin OmpG in the open and closed conformation | | 分子名称: | CALCIUM ION, LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE PROTEIN G, ... | | 著者 | Yildiz, O, Vinothkumar, K.R, Goswami, P, Kuehlbrandt, W. | | 登録日 | 2006-07-04 | | 公開日 | 2006-08-14 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Structure of the Monomeric Outer-Membrane Porin Ompg in the Open and Closed Conformation.
Embo J., 25, 2006
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2IWW
 | | Structure of the monomeric outer membrane porin OmpG in the open and closed conformation | | 分子名称: | LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE PROTEIN G, beta-D-glucopyranose, ... | | 著者 | Yildiz, O, Vinothkumar, K.R, Goswami, P, Kuehlbrandt, W. | | 登録日 | 2006-07-05 | | 公開日 | 2006-08-14 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structure of the Monomeric Outer-Membrane Porin Ompg in the Open and Closed Conformation.
Embo J., 25, 2006
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1WPS
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7P8W
 | | Human erythrocyte catalase cryoEM | | 分子名称: | Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Chen, S, Li, J, Vinothkumar, K.R, Henderson, R. | | 登録日 | 2021-07-23 | | 公開日 | 2021-08-25 | | 最終更新日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (2.2 Å) | | 主引用文献 | Interaction of human erythrocyte catalase with air-water interface in cryoEM.
Microscopy (Oxf), 71, 2022
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7P2L
 | | thermostabilised 7TM domain of human mGlu5 receptor bound to photoswitchable ligand alloswitch-1 | | 分子名称: | 2-chloranyl-~{N}-[2-methoxy-4-[(~{E})-pyridin-2-yldiazenyl]phenyl]benzamide, Metabotropic glutamate receptor 5,Endolysin,Metabotropic glutamate receptor 5 | | 著者 | Huang, C.Y, Vinothkumar, K.R, Lebon, G. | | 登録日 | 2021-07-06 | | 公開日 | 2021-09-08 | | 最終更新日 | 2024-01-31 | | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | | 主引用文献 | Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.
Cell Rep, 36, 2021
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5O31
 | | Mitochondrial complex I in the deactive state | | 分子名称: | Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... | | 著者 | Blaza, J.N, Vinothkumar, K.R, Hirst, J. | | 登録日 | 2017-05-23 | | 公開日 | 2018-01-17 | | 最終更新日 | 2019-10-23 | | 実験手法 | ELECTRON MICROSCOPY (4.13 Å) | | 主引用文献 | Structure of the Deactive State of Mammalian Respiratory Complex I.
Structure, 26, 2018
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1VEA
 | | Crystal Structure of HutP, an RNA binding antitermination protein | | 分子名称: | Hut operon positive regulatory protein, N-(2-NAPHTHYL)HISTIDINAMIDE | | 著者 | Kumarevel, T.S, Fujimoto, Z, Karthe, P, Oda, M, Mizuno, H, Kumar, P.K.R. | | 登録日 | 2004-03-29 | | 公開日 | 2004-07-20 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Crystal Structure of Activated HutP; An RNA Binding Protein that Regulates Transcription of the hut Operon in Bacillus subtilis
Structure, 12, 2004
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8WZI
 | | One RBD up state of Spike glycoprotein, SARS-CoV-2 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | | 著者 | Yadav, S, Vinothkumar, K.R. | | 登録日 | 2023-11-01 | | 公開日 | 2024-07-10 | | 最終更新日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (3 Å) | | 主引用文献 | Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
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8WZM
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8WZH
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8WZK
 | | Human erythrocyte catalase | | 分子名称: | Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Yadav, S, Vinothkumar, K.R. | | 登録日 | 2023-11-01 | | 公開日 | 2024-07-10 | | 最終更新日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (2.4 Å) | | 主引用文献 | Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
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8WZJ
 | | Human erythrocyte catalase | | 分子名称: | Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Yadav, S, Vinothkumar, K.R. | | 登録日 | 2023-11-01 | | 公開日 | 2024-07-10 | | 最終更新日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | | 主引用文献 | Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
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8WV4
 | | C-reactive protein, pentamer | | 分子名称: | C-reactive protein(1-205), CALCIUM ION | | 著者 | Yadav, S, Vinothkumar, K.R. | | 登録日 | 2023-10-23 | | 公開日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (3.3 Å) | | 主引用文献 | Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
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8WV6
 | | PaaZ, bifunctional enzyme | | 分子名称: | Bifunctional protein PaaZ | | 著者 | Yadav, S, Vinothkumar, K.R. | | 登録日 | 2023-10-23 | | 公開日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (2.3 Å) | | 主引用文献 | Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
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8WV5
 | | C-reactive protein, decamer | | 分子名称: | C-reactive protein(1-205), CALCIUM ION | | 著者 | Yadav, S, Vinothkumar, K.R. | | 登録日 | 2023-10-23 | | 公開日 | 2024-07-17 | | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | | 主引用文献 | Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
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7Y0D
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6LVB
 | | Structure of Dimethylformamidase, tetramer | | 分子名称: | FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit | | 著者 | Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R. | | 登録日 | 2020-02-02 | | 公開日 | 2020-06-03 | | 最終更新日 | 2024-03-27 | | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | | 主引用文献 | A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
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7V2Q
 | | T.thermophilus 30S ribosome with KsgA, class K6 | | 分子名称: | 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | 著者 | Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. | | 登録日 | 2021-08-09 | | 公開日 | 2022-04-06 | | 最終更新日 | 2024-06-12 | | 実験手法 | ELECTRON MICROSCOPY (3.24 Å) | | 主引用文献 | Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
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7V2N
 | | T.thermophilus 30S ribosome with KsgA, class K2 | | 分子名称: | 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | 著者 | Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. | | 登録日 | 2021-08-09 | | 公開日 | 2022-04-06 | | 最終更新日 | 2024-06-12 | | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | | 主引用文献 | Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
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