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7P7W
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BU of 7p7w by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and ADP
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-20
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P7I
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BU of 7p7i by Molmil
Native structure of N-acetylglucosamine kinase from Plesiomonas shigelloides
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-19
公開日2022-07-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9L
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N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine-6-phosphate
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-27
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9P
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BU of 7p9p by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and AMP-PNP inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-27
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7PA1
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BU of 7pa1 by Molmil
Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in the absence of N-acetylglucoseamine substrate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-28
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9Y
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BU of 7p9y by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-28
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
5LU5
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BU of 5lu5 by Molmil
A quantum half-site enzyme
分子名称: 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Vivoli, M, Harmer, N.J, Pang, J.
登録日2016-09-08
公開日2017-12-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A half-site multimeric enzyme achieves its cooperativity without conformational changes.
Sci Rep, 7, 2017
5LTZ
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BU of 5ltz by Molmil
GmhA_mutant Q175E
分子名称: 1,2-ETHANEDIOL, D-ALTRO-HEPT-2-ULOSE 7-PHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Vivoli, M, Harmer, N.J.
登録日2016-09-07
公開日2017-12-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献A half-site multimeric enzyme achieves its cooperativity without conformational changes.
Sci Rep, 7, 2017
5LU6
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BU of 5lu6 by Molmil
Heptose isomerase mutant - H64Q
分子名称: 1,2-ETHANEDIOL, D-ALTRO-HEPT-2-ULOSE 7-PHOSPHATE, GLYCEROL, ...
著者Vivoli, M, Harmer, N.J, Pang, J.
登録日2016-09-08
公開日2017-12-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献A half-site multimeric enzyme achieves its cooperativity without conformational changes.
Sci Rep, 7, 2017
5LU7
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BU of 5lu7 by Molmil
Heptose isomerase GmhA mutant - D61A
分子名称: 1,2-ETHANEDIOL, 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose, Phosphoheptose isomerase, ...
著者Vivoli, M, Harmer, N.J, Pang, J.
登録日2016-09-08
公開日2017-12-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献A half-site multimeric enzyme achieves its cooperativity without conformational changes.
Sci Rep, 7, 2017
4BQO
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BU of 4bqo by Molmil
Structural insights into WcbI, a novel polysaccharide biosynthesis enzyme. Native protein without disulfide bond between COA and Cys14.
分子名称: BROMIDE ION, COENZYME A, DI(HYDROXYETHYL)ETHER, ...
著者Vivoli, M, Ayres, E, Isupov, M.N, Harmer, N.J.
登録日2013-05-31
公開日2013-11-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural Insights Into Wcbi, a Novel Polysaccharide-Biosynthesis Enzyme.
Iucrj, 1, 2014
4BQN
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BU of 4bqn by Molmil
Structural insights into WcbI, a novel polysaccharide biosynthesis enzyme. Native protein.
分子名称: CAPSULAR POLYSACCHARIDE BIOSYNTHESIS PROTEIN, CHLORIDE ION, COENZYME A, ...
著者Vivoli, M, Ayres, E, Isupov, M.N, Harmer, N.J.
登録日2013-05-31
公開日2013-11-06
最終更新日2014-08-13
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structural Insights Into Wcbi, a Novel Polysaccharide-Biosynthesis Enzyme.
Iucrj, 1, 2014
7PQ9
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BU of 7pq9 by Molmil
Crystal structure of Bacillus clausii pdxR at 2.8 Angstroms resolution
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Vivoli Vega, M, Isupov, M.N, Harmer, N.
登録日2021-09-16
公開日2022-09-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
8ORU
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BU of 8oru by Molmil
cyclic 2,3-diphosphoglycerate synthetase from the hyperthermophilic archaeon Methanothermus fervidus bound to 2,3-diphosphoglycerate and ADP.
分子名称: (2R)-2,3-diphosphoglyceric acid, 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ...
著者De Rose, S.A, Isupov, M.
登録日2023-04-17
公開日2023-12-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structural characterization of a novel cyclic 2,3-diphosphoglycerate synthetase involved in extremolyte production in the archaeon Methanothermus fervidus .
Front Microbiol, 14, 2023
8ORK
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BU of 8ork by Molmil
cyclic 2,3-diphosphoglycerate synthetase from the hyperthermophilic archaeon Methanothermus fervidus
分子名称: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, ...
著者De Rose, S.A, Isupov, M.
登録日2023-04-14
公開日2023-12-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural characterization of a novel cyclic 2,3-diphosphoglycerate synthetase involved in extremolyte production in the archaeon Methanothermus fervidus .
Front Microbiol, 14, 2023
6O49
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BU of 6o49 by Molmil
CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF339
分子名称: (2~{S})-~{N}-[3-oxidanylidene-3-[(3,4,5-trimethoxyphenyl)amino]propyl]-1-(phenylmethyl)sulfonyl-piperidine-2-carboxamide, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-02-28
公開日2020-02-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF339
to be published
6O4A
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BU of 6o4a by Molmil
CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF355
分子名称: 2-(pyridin-3-ylcarbonylamino)ethyl (2~{S})-1-(phenylmethyl)sulfonylpiperidine-2-carboxylate, CALCIUM ION, Ubiquitin-like protein SMT3,Peptidyl-prolyl cis-trans isomerase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-02-28
公開日2020-02-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF355
to be published
7ZTH
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BU of 7zth by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the open conformation
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-05-10
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZN5
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BU of 7zn5 by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C2 symmetry.
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-04-20
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZLA
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BU of 7zla by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the half-closed conformation
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Savino, C, Exertier, C, Bolognesi, M, Chaves Sanjuan, A.
登録日2022-04-14
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZPA
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BU of 7zpa by Molmil
Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C1 symmetry
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-04-27
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
5FRD
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BU of 5frd by Molmil
Structure of a thermophilic esterase
分子名称: CARBOXYLESTERASE (EST-2), CHLORIDE ION, CITRATE ANION, ...
著者Sayer, C, Finnigan, W, Isupov, M.N, Levisson, M, Kengen, S.W.M, van der Oost, J, Harmer, N, Littlechild, J.A.
登録日2015-12-17
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and Biochemical Characterisation of Archaeoglobus Fulgidus Esterase Reveals a Bound Coa Molecule in the Vicinity of the Active Site.
Sci.Rep., 6, 2016
6G1C
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BU of 6g1c by Molmil
Crystal structure of the N-terminal domain of Burkholderia Pseudomallei antitoxin HicB
分子名称: Antitoxin HicB
著者Winter, A.J, Williams, C, Crump, M.P.
登録日2018-03-21
公開日2018-10-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The molecular basis of protein toxin HicA-dependent binding of the protein antitoxin HicB to DNA.
J. Biol. Chem., 293, 2018
6G1N
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BU of 6g1n by Molmil
Crystal structure of the Burkholderia Pseudomallei antitoxin HicB
分子名称: CHLORIDE ION, GLYCEROL, antitoxin HicB
著者Winter, A.J, Williams, C, Crump, M.P.
登録日2018-03-21
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The molecular basis of protein toxin HicA-dependent binding of the protein antitoxin HicB to DNA.
J. Biol. Chem., 293, 2018
6G26
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BU of 6g26 by Molmil
The crystal structure of the Burkholderia pseudomallei HicAB complex
分子名称: 1,2-ETHANEDIOL, HicA, HicB, ...
著者Winter, A.J, Isupov, M.N, Williams, C, Crump, M.P.
登録日2018-03-22
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The molecular basis of protein toxin HicA-dependent binding of the protein antitoxin HicB to DNA.
J. Biol. Chem., 293, 2018

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