4TZX
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4TZY
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6PQ7
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6PUQ
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1NU4
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![BU of 1nu4 by Molmil](/molmil-images/mine/1nu4) | U1A RNA binding domain at 1.8 angstrom resolution reveals a pre-organized C-terminal helix | 分子名称: | MAGNESIUM ION, MALONIC ACID, U1A RNA binding domain | 著者 | Rupert, P.B, Xiao, H, Ferre-D'Amare, A.R. | 登録日 | 2003-01-30 | 公開日 | 2003-02-14 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | U1A RNA-binding domain at 1.8 A resolution. Acta Crystallogr.,Sect.D, 59, 2003
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3B4A
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2Z75
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![BU of 2z75 by Molmil](/molmil-images/mine/2z75) | T. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate | 分子名称: | 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ... | 著者 | Klein, D.J, Wilkinson, S.R, Been, M.D, Ferre-D'Amare, A.R. | 登録日 | 2007-08-15 | 公開日 | 2007-09-04 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Requirement of helix P2.2 and nucleotide G1 for positioning the cleavage site and cofactor of the glmS ribozyme J.Mol.Biol., 373, 2007
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2Z74
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![BU of 2z74 by Molmil](/molmil-images/mine/2z74) | T. tengcongensis glmS ribozyme bound to glucose-6-phosphate | 分子名称: | 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ... | 著者 | Klein, D.J, Wilkinson, S.R, Been, M.D, Ferre-D'Amare, A.R. | 登録日 | 2007-08-15 | 公開日 | 2007-09-04 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Requirement of helix P2.2 and nucleotide G1 for positioning the cleavage site and cofactor of the glmS ribozyme J.Mol.Biol., 373, 2007
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3B4B
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3B4C
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7L0Z
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![BU of 7l0z by Molmil](/molmil-images/mine/7l0z) | Spinach variant bound to DFHBI-1T | 分子名称: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, PHOSPHATE ION, ... | 著者 | Truong, L, Trachman, R.J, Ferre-D'Amare, A.R. | 登録日 | 2020-12-13 | 公開日 | 2021-05-26 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Fluorogenic aptamers resolve the flexibility of RNA junctions using orientation-dependent FRET. Rna, 27, 2021
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7KVV
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7KVT
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![BU of 7kvt by Molmil](/molmil-images/mine/7kvt) | Crystal structure of Squash RNA aptamer in complex with DFHBI-1T with iridium (III) ions | 分子名称: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ... | 著者 | Truong, L, Ferre-D'Amare, A.R. | 登録日 | 2020-11-28 | 公開日 | 2022-01-19 | 最終更新日 | 2024-05-22 | 実験手法 | X-RAY DIFFRACTION (2.73 Å) | 主引用文献 | The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold. Nat.Chem.Biol., 18, 2022
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7KVU
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![BU of 7kvu by Molmil](/molmil-images/mine/7kvu) | Crystal structure of Squash RNA aptamer in complex with DFHBI-1T | 分子名称: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, POTASSIUM ION, ... | 著者 | Truong, L, Ferre-D'Amare, A.R. | 登録日 | 2020-11-28 | 公開日 | 2022-01-19 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.68 Å) | 主引用文献 | The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold. Nat.Chem.Biol., 18, 2022
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7LYJ
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3EGZ
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![BU of 3egz by Molmil](/molmil-images/mine/3egz) | Crystal structure of an in vitro evolved tetracycline aptamer and artificial riboswitch | 分子名称: | 7-CHLOROTETRACYCLINE, MAGNESIUM ION, Tetracycline aptamer and artificial riboswitch, ... | 著者 | Xiao, H, Edwards, T.E, Ferre-D'Amare, A.R. | 登録日 | 2008-09-11 | 公開日 | 2008-10-28 | 最終更新日 | 2021-10-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural basis for specific, high-affinity tetracycline binding by an in vitro evolved aptamer and artificial riboswitch Chem.Biol., 15, 2008
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8U5T
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![BU of 8u5t by Molmil](/molmil-images/mine/8u5t) | Structure of Mango II variant aptamer bound to T01-6A-B | 分子名称: | 3-{2,16-dioxo-20-[(3aS,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium, Mango II variant, POTASSIUM ION, ... | 著者 | Passalacqua, L.F.M, Ferre-D'Amare, A.R. | 登録日 | 2023-09-12 | 公開日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structure of Mango II variant aptamer bound to T01-6A-B To Be Published
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8U5J
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![BU of 8u5j by Molmil](/molmil-images/mine/8u5j) | Structure of Mango III variant aptamer bound to T01-07M-B | 分子名称: | 2-[(E)-(1,7-dimethylquinolin-4(1H)-ylidene)methyl]-3-{2,16-dioxo-20-[(3aR,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-1,3-benzothiazol-3-ium, DIMETHYL SULFOXIDE, Mango III variant, ... | 著者 | Passalacqua, L.F.M, Ferre-D'Amare, A.R. | 登録日 | 2023-09-12 | 公開日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structure of Mango III variant aptamer bound to T01-07M-B To Be Published
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8U5K
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8U5Z
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![BU of 8u5z by Molmil](/molmil-images/mine/8u5z) | Structure of Mango II variant aptamer bound to T01-7M-B | 分子名称: | 2-[(E)-(1,7-dimethylquinolin-4(1H)-ylidene)methyl]-3-{2,16-dioxo-20-[(3aR,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-1,3-benzothiazol-3-ium, Mango II variant, POTASSIUM ION, ... | 著者 | Passalacqua, L.F.M, Ferre-D'Amare, A.R. | 登録日 | 2023-09-13 | 公開日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structure of Mango II variant aptamer bound to T01-7M-B To Be Published
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3CUL
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![BU of 3cul by Molmil](/molmil-images/mine/3cul) | Aminoacyl-tRNA synthetase ribozyme | 分子名称: | MAGNESIUM ION, POTASSIUM ION, RNA (92-MER), ... | 著者 | Xiao, H, Murakami, H, Suga, H, Ferre-D'Amare, A.R. | 登録日 | 2008-04-16 | 公開日 | 2008-06-24 | 最終更新日 | 2021-10-20 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme. Nature, 454, 2008
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8U5P
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![BU of 8u5p by Molmil](/molmil-images/mine/8u5p) | Structure of Mango II aptamer bound to T01-6A-B | 分子名称: | 3-[2,16-dioxo-20-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-6,9,12-trioxa-3,15-diazaicosan-1-yl]-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium, Mango II, POTASSIUM ION | 著者 | Passalacqua, L.F.M, Ferre-D'Amare, A.R. | 登録日 | 2023-09-12 | 公開日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structure of Mango II aptamer bound to T01-6A-B To Be Published
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8U60
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8U5R
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3FS0
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