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6X0N
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BU of 6x0n by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
分子名称: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
著者Halic, M, Bilokapic, S.
登録日2020-05-16
公開日2020-09-16
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
3MF2
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BU of 3mf2 by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Bll0957 protein, GLYCEROL, ...
著者Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
登録日2010-04-01
公開日2010-07-28
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
3MEY
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BU of 3mey by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Bll0957 protein, MAGNESIUM ION, ...
著者Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
登録日2010-04-01
公開日2010-07-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
3MF1
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BU of 3mf1 by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with an analogue of glycyl adenylate
分子名称: 5'-O-(glycylsulfamoyl)adenosine, Bll0957 protein, ZINC ION
著者Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
登録日2010-04-01
公開日2010-07-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
6SEG
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BU of 6seg by Molmil
Class1: CENP-A nucleosome in complex with CENP-C central region
分子名称: DNA (145-MER), Histone H2A type 2-A, Histone H2B type 1-C/E/F/G/I, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-30
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SE0
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BU of 6se0 by Molmil
Class 1 : CENP-A nucleosome
分子名称: DNA (145-MER), Histone H2A type 2-A, Histone H2B type 1-C/E/F/G/I, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SEE
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BU of 6see by Molmil
Class2A : CENP-A nucleosome in complex with CENP-C central region
分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SEF
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BU of 6sef by Molmil
Class2C : CENP-A nucleosome in complex with CENP-C central region
分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SE6
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BU of 6se6 by Molmil
Class2 : CENP-A nucleosome in complex with CENP-C central region
分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
8G87
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BU of 8g87 by Molmil
Human Oct4 bound to nucleosome with human nMatn1 sequence (focused refinement of Oct4 bound region)
分子名称: POU domain, class 5, transcription factor 1, ...
著者Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
登録日2023-02-17
公開日2023-03-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023
8G86
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BU of 8g86 by Molmil
Human Oct4 bound to nucleosome with human nMatn1 sequence (focused refinement of nucleosome)
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
登録日2023-02-17
公開日2023-03-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023
8G8B
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BU of 8g8b by Molmil
Nucleosome with human nMatn1 sequence in complex with Human Oct4
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
登録日2023-02-17
公開日2023-03-22
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023
8G88
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BU of 8g88 by Molmil
Human Oct4 bound to nucleosome with human nMatn1 sequence
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
登録日2023-02-17
公開日2023-03-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023
8G8E
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BU of 8g8e by Molmil
Human Oct4 bound to nucleosome with human LIN28B sequence
分子名称: LIN28B DNA (32-MER), POU domain, class 5, ...
著者Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
登録日2023-02-17
公開日2023-03-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023
8G8G
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BU of 8g8g by Molmil
Interaction of H3 tail in LIN28B nucleosome with Oct4
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
登録日2023-02-17
公開日2023-03-22
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023
9E1O
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BU of 9e1o by Molmil
Snf2h bound nucleosome complex - ClassB1
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (148-MER), DNA (150-MER), ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Snf2h bound nucleosome complex-ClassB1
To Be Published
9E1Q
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BU of 9e1q by Molmil
Snf2h bound nucleosome complex - ClassB3
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (152-MER), Histone H2A type 1, ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Snf2h bound nucleosome complex-ClassB3
To Be Published
9E1W
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BU of 9e1w by Molmil
Snf2h bound nucleosome complex - ClassC3
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (151-MER), DNA (152-MER), ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Snf2h bound nucleosome complex-ClassC3
To Be Published
9E1Y
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BU of 9e1y by Molmil
Empty Nucleosome with 601 widom sequence
分子名称: DNA (153-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Mechanisms of chromatin remodeling by an Snf2-type ATPase.
Biorxiv, 2025
9E1X
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BU of 9e1x by Molmil
Snf2h bound nucleosome complex - ClassD1
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (149-MER), DNA (150-MER), ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Mechanisms of chromatin remodeling by an Snf2-type ATPase.
Biorxiv, 2025
9E1R
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BU of 9e1r by Molmil
Snf2h bound nucleosome complex - ClassB4
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (152-MER), Histone H2A type 1, ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Snf2h bound nucleosome complex-ClassB4
To Be Published
9E1U
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BU of 9e1u by Molmil
Snf2h bound nucleosome complex - ClassC1
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (151-MER), DNA (152-MER), ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Mechanisms of chromatin remodeling by an Snf2-type ATPase.
Biorxiv, 2025
9E1P
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BU of 9e1p by Molmil
Snf2h bound nucleosome complex - ClassB2
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (152-MER), Histone H2A type 1, ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Snf2h bound nucleosome complex-ClassB2
To Be Published
9E1M
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BU of 9e1m by Molmil
Snf2h bound nucleosome complex - ClassA2
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (149-MER), DNA (151-MER), ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Snf2h bound nucleosome complex - ClassA2
To Be Published
9E1V
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BU of 9e1v by Molmil
Snf2h bound nucleosome complex - ClassC2
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (151-MER), DNA (152-MER), ...
著者Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M.
登録日2024-10-21
公開日2025-01-22
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Snf2h bound nucleosome complex-ClassC2
To Be Published

238895

件を2025-07-16に公開中

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