2HRS
 
 | | Crystal structure of L42H V224H design intermediate for GFP metal ion reporter | | 分子名称: | 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION | | 著者 | Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2006-07-20 | | 公開日 | 2008-04-08 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
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2HJO
 | | Crystal structure of V224H design intermediate for GFP metal ion reporter | | 分子名称: | 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION | | 著者 | Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2006-06-30 | | 公開日 | 2008-04-08 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | | 主引用文献 | Iterative Structure-Based Design of a Green
Fluorescent Protein Metal Ion Reporter
To be Published
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2G6E
 | | Structure of cyclized F64L S65A Y66S GFP variant | | 分子名称: | Green fluorescent protein, MAGNESIUM ION | | 著者 | Barondeau, D.P. | | 登録日 | 2006-02-24 | | 公開日 | 2006-04-18 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | | 主引用文献 | Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
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2G2S
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2HCG
 | | Structure of S65T Y66F GFP variant after cyclization, carbon-carbon bond cleavage, and oxygen incorporation reactions | | 分子名称: | Green fluorescent protein, MAGNESIUM ION | | 著者 | Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2006-06-16 | | 公開日 | 2007-03-27 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | | 主引用文献 | The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
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5USR
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3S5D
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3S5E
 | | Crystal structure of human frataxin variant W155R, one of the Friedreich's ataxia point mutations | | 分子名称: | Frataxin, mitochondrial, MAGNESIUM ION | | 著者 | Tsai, C.-L, Bridwell-Rabb, J, Barondeau, D.P. | | 登録日 | 2011-05-23 | | 公開日 | 2011-06-29 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (1.31 Å) | | 主引用文献 | Friedreich's Ataxia Variants I154F and W155R Diminish Frataxin-Based Activation of the Iron-Sulfur Cluster Assembly Complex.
Biochemistry, 50, 2011
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3S5F
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2QRF
 | | Green Fluorescent Protein: Cyclized-only Intermediate of Chromophore Maturation in the Q183E variant | | 分子名称: | 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2007-07-28 | | 公開日 | 2009-04-21 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Green Fluorescent Protein Chromophore - Cyclized Intermediate
To be Published
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2QT2
 | | Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation | | 分子名称: | 1,2-ETHANEDIOL, Green fluorescent protein | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2007-07-31 | | 公開日 | 2009-04-21 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.31 Å) | | 主引用文献 | Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the Green Fluorescence Protein Fluorophore Biosynthesis Pathway
To be Published
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2QZ0
 | | Mature Q183E variant of Green Fluorescent Protein Chromophore | | 分子名称: | Green fluorescent protein, MAGNESIUM ION | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2007-08-15 | | 公開日 | 2009-04-21 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | | 主引用文献 | Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway
To be Published
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6P3J
 | | Crystal structure of LigU | | 分子名称: | (4E)-oxalomesaconate Delta-isomerase, CALCIUM ION, CHLORIDE ION, ... | | 著者 | Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P. | | 登録日 | 2019-05-23 | | 公開日 | 2019-07-31 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (2.02 Å) | | 主引用文献 | Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
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6P3H
 | | Crystal structure of LigU(K66M) bound to substrate | | 分子名称: | (1E)-4-oxobut-1-ene-1,2,4-tricarboxylic acid, (4E)-oxalomesaconate Delta-isomerase, CHLORIDE ION | | 著者 | Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P. | | 登録日 | 2019-05-23 | | 公開日 | 2019-07-31 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (1.62 Å) | | 主引用文献 | Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
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6P3K
 | | Crystal structure of LigU(C100S) | | 分子名称: | (4E)-oxalomesaconate Delta-isomerase, CHLORIDE ION | | 著者 | Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P. | | 登録日 | 2019-05-23 | | 公開日 | 2019-07-31 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | | 主引用文献 | Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
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2AWJ
 | | GFP R96M pre-cyclized intermediate in chromophore formation | | 分子名称: | MAGNESIUM ION, green-fluorescent protein | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2005-09-01 | | 公開日 | 2006-04-18 | | 最終更新日 | 2023-08-23 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
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2AWL
 | | Mature R96K GFP mutant | | 分子名称: | MAGNESIUM ION, green fluorescent protein | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2005-09-01 | | 公開日 | 2006-04-18 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | | 主引用文献 | Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
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4J5N
 | | Crystal Structure of a Deinococcus radiodurans PTE-like lactonase (drPLL) mutant Y28L/D71N/E101G/E179D/V235L/L270M | | 分子名称: | COBALT (II) ION, Phosphotriesterase, putative | | 著者 | Meier, M.M, Rajendran, C, Malisi, C, Fox, N.G, Xu, C, Schlee, S, Barondeau, D.P, Hocker, B, Sterner, R, Raushel, F.M. | | 登録日 | 2013-02-08 | | 公開日 | 2013-07-24 | | 最終更新日 | 2023-12-06 | | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | | 主引用文献 | Molecular engineering of organophosphate hydrolysis activity from a weak promiscuous lactonase template.
J.Am.Chem.Soc., 135, 2013
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2AWK
 | | GFP R96M mature chromophore | | 分子名称: | MAGNESIUM ION, green fluorescent protein | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2005-09-01 | | 公開日 | 2006-04-18 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.15 Å) | | 主引用文献 | Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
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2AWM
 | | GFP R96A chromophore maturation recovery mutant R96A Q183R | | 分子名称: | MAGNESIUM ION, green fluorescent protein | | 著者 | Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. | | 登録日 | 2005-09-01 | | 公開日 | 2006-04-18 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
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3F7L
 | | X-ray Crystal Structure of Alvinella pompejana Cu,Zn Superoxide Dismutase | | 分子名称: | ACETIC ACID, COPPER (I) ION, COPPER (II) ION, ... | | 著者 | Shin, D.S, DiDonato, M, Barondeau, D.P, Getzoff, E.D, Tainer, J.A. | | 登録日 | 2008-11-09 | | 公開日 | 2009-02-10 | | 最終更新日 | 2023-09-06 | | 実験手法 | X-RAY DIFFRACTION (0.99 Å) | | 主引用文献 | Superoxide Dismutase from the Eukaryotic Thermophile Alvinella pompejana: Structures, Stability, Mechanism, and Insights into Amyotrophic Lateral Sclerosis.
J.Mol.Biol., 385, 2009
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3F7K
 | | X-ray Crystal Structure of an Alvinella pompejana Cu,Zn Superoxide Dismutase- Hydrogen Peroxide Complex | | 分子名称: | COPPER (I) ION, COPPER (II) ION, Copper,Zinc Superoxide Dismutase, ... | | 著者 | Shin, D.S, DiDonato, M, Barondeau, D.P, Getzoff, E.D, Tainer, J.A. | | 登録日 | 2008-11-09 | | 公開日 | 2009-02-10 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | | 主引用文献 | Superoxide Dismutase from the Eukaryotic Thermophile Alvinella pompejana: Structures, Stability, Mechanism, and Insights into Amyotrophic Lateral Sclerosis.
J.Mol.Biol., 385, 2009
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3ITC
 | | Crystal structure of Sco3058 with bound citrate and glycerol | | 分子名称: | CITRIC ACID, GLYCEROL, ZINC ION, ... | | 著者 | Nguyen, T.T, Cummings, J.A, Tsai, C.-L, Barondeau, D.P, Raushel, F.M. | | 登録日 | 2009-08-28 | | 公開日 | 2010-02-02 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Structure, mechanism, and substrate profile for Sco3058: the closest bacterial homologue to human renal dipeptidase
Biochemistry, 49, 2010
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3T3K
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3T3T
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