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6DXJ
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BU of 6dxj by Molmil
Crystal structure of double-stranded DNA GAGGCCTC; crystals grown in Zn2+
分子名称: DNA (5'-D(*GP*AP*GP*GP*CP*CP*TP*C)-3'), ZINC ION
著者Hou, C, Tsodikov, O.V.
登録日2018-06-29
公開日2019-01-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
6DY5
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BU of 6dy5 by Molmil
Crystal structure of double-stranded DNA AGGGATCCCT in complex with Zn2+
分子名称: DNA (5'-D(*AP*GP*GP*GP*AP*TP*CP*CP*CP*T)-3'), SPERMIDINE, ZINC ION
著者Hou, C, Tsodikov, O.V.
登録日2018-07-01
公開日2019-01-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
6DY9
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BU of 6dy9 by Molmil
Crystal structure of double-stranded DNA GGGATCCC; crystals grown in Zn2+
分子名称: DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*C)-3'), ZINC ION
著者Hou, C, Tsodikov, O.V.
登録日2018-07-01
公開日2019-01-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
7JSA
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BU of 7jsa by Molmil
Crystal structure of the DNA binding domain of human transcription factor ERF in the reduced form, in complex with double-stranded DNA ACCGGAAGTG
分子名称: DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), ETS domain-containing transcription factor ERF
著者Hou, C, Tsodikov, O.V.
登録日2020-08-14
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural Insight into the DNA Binding Function of Transcription Factor ERF.
Biochemistry, 2020
7JSL
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BU of 7jsl by Molmil
Crystal structure of the DNA binding domain of human transcription factor ERF in the oxidized form, in complex with double-stranded DNA ACCGGAAGTG
分子名称: DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), ETS domain-containing transcription factor ERF
著者Hou, C, Tsodikov, O.V.
登録日2020-08-14
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4.51 Å)
主引用文献Structural Insight into the DNA Binding Function of Transcription Factor ERF.
Biochemistry, 2020
7V0B
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BU of 7v0b by Molmil
Crystal structure of halogenase CtcP from Kitasatospora aureofaciens in complex with FAD
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hou, C, Tsodikov, O.V.
登録日2022-05-10
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures and complex formation of halogenase CtcP and FAD reductase CtcQ from the chlortetracycline biosynthetic pathway
To Be Published
7V0D
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BU of 7v0d by Molmil
Crystal structure of halogenase CtcP from Kitasatospora aureofaciens
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Hou, C, Tsodikov, O.V.
登録日2022-05-10
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures and complex formation of halogenase CtcP and FAD reductase CtcQ from the chlortetracycline biosynthetic pathway
To Be Published
4I9G
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BU of 4i9g by Molmil
Crystal structure of glycerol phosphate phosphatase Rv1692 from Mycobacterium tuberculosis in complex with magnesium
分子名称: Glycerol 3-phosphate phosphatase, MAGNESIUM ION
著者Biswas, T, Larrouy-Maumus, G, de Carvalho, L.P, Tsodikov, O.V.
登録日2012-12-05
公開日2013-07-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Discovery of a glycerol 3-phosphate phosphatase reveals glycerophospholipid polar head recycling in Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4I9F
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BU of 4i9f by Molmil
Crystal structure of glycerol phosphate phosphatase Rv1692 from Mycobacterium tuberculosis in complex with calcium
分子名称: CALCIUM ION, CHLORIDE ION, Glycerol 3-phosphate phosphatase
著者Biswas, T, Larrouy-Maumus, G, de Carvalho, L.P, Tsodikov, O.V.
登録日2012-12-05
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Discovery of a glycerol 3-phosphate phosphatase reveals glycerophospholipid polar head recycling in Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IJJ
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BU of 4ijj by Molmil
Structure of transcription factor DksA2 from Pseudomonas aeruginosa
分子名称: Putative C4-type zinc finger protein, DksA/TraR family, SULFATE ION
著者Biswas, T, Furman, R, Artsimovitch, I, Tsodikov, O.V.
登録日2012-12-21
公開日2013-02-27
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献DksA2, a zinc-independent structural analog of the transcription factor DksA.
Febs Lett., 587, 2013
9BDV
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BU of 9bdv by Molmil
NF-kappaB RelA homo-dimer bound to TA-centric kappaB DNA
分子名称: DNA (5'-D(*AP*TP*CP*AP*CP*TP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(P*AP*CP*TP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*AP*GP*TP*GP*AP*T)-3'), SULFATE ION, ...
著者Biswas, T, Shahabi, S, Tsodikov, O.V.
登録日2024-04-12
公開日2024-04-24
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
9BDW
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BU of 9bdw by Molmil
NF-kappaB RelA homo-dimer bound to GC-centric kappaB DNA
分子名称: DNA (5'-D(P*AP*CP*TP*GP*GP*GP*AP*AP*GP*TP*TP*CP*CP*AP*GP*TP*GP*AP*T)-3'), DNA (5'-D(P*AP*TP*CP*AP*CP*TP*GP*GP*AP*AP*CP*TP*TP*CP*CP*CP*AP*GP*T)-3'), SULFATE ION, ...
著者Biswas, T, Shahabi, S, Tsodikov, O.V, Huang, D, Ghosh, G.
登録日2024-04-12
公開日2024-04-24
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
9BDX
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BU of 9bdx by Molmil
NF-kappaB RelA homo-dimer bound to CG-centric kappaB DNA
分子名称: DNA (5'-D(*AP*TP*CP*AP*CP*TP*GP*GP*AP*AP*GP*TP*TP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(P*AP*CP*TP*GP*GP*GP*AP*AP*CP*TP*TP*CP*CP*AP*GP*TP*GP*AP*T)-3'), Transcription factor p65
著者Biswas, T, Shahabi, S, Tsodikov, O.V, Ghosh, G.
登録日2024-04-12
公開日2024-04-24
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
3R1K
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BU of 3r1k by Molmil
Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis H37Rv in complex with CoA and an acetamide moiety
分子名称: ACETAMIDE, COENZYME A, Enhanced intracellular survival protein
著者Biswas, T, Chen, W, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2011-03-10
公開日2011-06-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unusual regioversatility of acetyltransferase Eis, a cause of drug resistance in XDR-TB.
Proc.Natl.Acad.Sci.USA, 108, 2011
3ITW
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BU of 3itw by Molmil
Crystal structure of TioX from Micromonospora sp. ML1
分子名称: Protein tioX
著者Biswas, T, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2009-08-28
公開日2010-02-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A New Scaffold of an Old Protein Fold Ensures Binding to the Bisintercalator Thiocoraline.
J.Mol.Biol., 397, 2010
3K6Z
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BU of 3k6z by Molmil
Crystal structure of Rv3671c protease, inactive form
分子名称: POSSIBLE MEMBRANE-ASSOCIATED SERINE PROTEASE
著者Biswas, T, Small, J, Vandal, O, Ehrt, S, Tsodikov, O.V.
登録日2009-10-10
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural insight into serine protease Rv3671c that Protects M. tuberculosis from oxidative and acidic stress.
Structure, 18, 2010
3I6B
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BU of 3i6b by Molmil
Crystal structure of YrbI lacking the last 8 residues, in complex with Kdo and inorganic phosphate
分子名称: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, MAGNESIUM ION, ...
著者Biswas, T, Tsodikov, O.V.
登録日2009-07-06
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
3K6Y
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BU of 3k6y by Molmil
Crystal structure of Rv3671c protease from M. tuberculosis, active form
分子名称: POSSIBLE MEMBRANE-ASSOCIATED SERINE PROTEASE
著者Biswas, T, Small, J, Vandal, O, Ehrt, S, Tsodikov, O.V.
登録日2009-10-10
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural insight into serine protease Rv3671c that Protects M. tuberculosis from oxidative and acidic stress.
Structure, 18, 2010
4RPA
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BU of 4rpa by Molmil
Crystal structure of inorganic pyrophosphatase from Staphylococcus aureus in complex with Mn2+
分子名称: MANGANESE (II) ION, Probable manganese-dependent inorganic pyrophosphatase
著者Gajadeera, C.S, Tsodikov, O.V.
登録日2014-10-30
公開日2015-01-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of inorganic pyrophosphatase from Staphylococcus aureus reveals conformational flexibility of the active site.
J.Struct.Biol., 189, 2015
4RV9
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BU of 4rv9 by Molmil
Crystal structure of MtmC in complex with SAH
分子名称: ACETATE ION, CHLORIDE ION, D-mycarose 3-C-methyltransferase, ...
著者Hou, C, Chen, J.-M, Rohr, J, Tsodikov, O.V.
登録日2014-11-25
公開日2015-02-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
5E8G
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BU of 5e8g by Molmil
Crystal structure of the DNA binding domain of human transcription factor FLI1
分子名称: COBALT (II) ION, Friend leukemia integration 1 transcription factor
著者Hou, C, Tsodikov, O.V.
登録日2015-10-14
公開日2015-12-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for Dimerization and DNA Binding of Transcription Factor FLI1.
Biochemistry, 54, 2015
5EBV
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BU of 5ebv by Molmil
Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with inhibitor 11c and CoA
分子名称: 5-(4-chlorophenyl)-~{N}-[3-(3,4-dihydro-1~{H}-isoquinolin-2-yl)propyl]-4-methyl-1,1-bis(oxidanylidene)-1,2-thiazol-3-amine, CHLORIDE ION, COENZYME A, ...
著者Gajadeera, C.S, Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2015-10-19
公開日2016-03-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Potent Inhibitors of Acetyltransferase Eis Overcome Kanamycin Resistance in Mycobacterium tuberculosis.
Acs Chem.Biol., 11, 2016
5EC4
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BU of 5ec4 by Molmil
Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with inhibitor 13g and CoA
分子名称: 5-(3-chlorophenyl)-4-methyl-~{N}-(3-morpholin-4-ylpropyl)-1,1-bis(oxidanylidene)-1,2-thiazol-3-amine, COENZYME A, Enhanced intracellular survival protein
著者Gajadeera, C.S, Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2015-10-20
公開日2016-03-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Potent Inhibitors of Acetyltransferase Eis Overcome Kanamycin Resistance in Mycobacterium tuberculosis.
Acs Chem.Biol., 11, 2016
5DBJ
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BU of 5dbj by Molmil
Crystal structure of halogenase PltA
分子名称: CHLORIDE ION, FADH2-dependent halogenase PltA, FLAVIN-ADENINE DINUCLEOTIDE
著者Pang, A.H, Tsodikov, O.V.
登録日2015-08-21
公開日2015-10-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of halogenase PltA from the pyoluteorin biosynthetic pathway.
J.Struct.Biol., 192, 2015
5E8I
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BU of 5e8i by Molmil
Crystal structure of the DNA binding domain of human transcription factor FLI1 in complex with a 10-mer DNA ACCGGAAGTG
分子名称: CALCIUM ION, DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), ...
著者Hou, C, Tsodikov, O.V.
登録日2015-10-14
公開日2015-12-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Structural Basis for Dimerization and DNA Binding of Transcription Factor FLI1.
Biochemistry, 54, 2015

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件を2024-06-12に公開中

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