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3V6Y
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BU of 3v6y by Molmil
crystal structure of FBF-2 in complex with a mutant gld-1 FBEa13 RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*AP*CP*UP*GP*UP*GP*CP*CP*AP*UP*AP*C)-3')
著者Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
3V71
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BU of 3v71 by Molmil
Crystal structure of PUF-6 in complex with 5BE13 RNA
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Puf (Pumilio/fbf) domain-containing protein 7, confirmed by transcript evidence, ...
著者Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
1VHH
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BU of 1vhh by Molmil
A POTENTIAL CATALYTIC SITE WITHIN THE AMINO-TERMINAL SIGNALLING DOMAIN OF SONIC HEDGEHOG
分子名称: SONIC HEDGEHOG, SULFATE ION, ZINC ION
著者Hall, T.M.T, Porter, J.A, Beachy, P.A, Leahy, D.J.
登録日1995-10-03
公開日1996-01-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A potential catalytic site revealed by the 1.7-A crystal structure of the amino-terminal signalling domain of Sonic hedgehog.
Nature, 378, 1995
1AT0
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BU of 1at0 by Molmil
17-kDA fragment of hedgehog C-terminal autoprocessing domain
分子名称: 17-HEDGEHOG
著者Hall, T.M.T, Porter, J.A, Young, K.E, Koonin, E.V, Beachy, P.A, Leahy, D.J.
登録日1997-08-15
公開日1997-11-12
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Hedgehog autoprocessing domain: homology between Hedgehog and self-splicing proteins.
Cell(Cambridge,Mass.), 91, 1997
4DZS
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BU of 4dzs by Molmil
Crystal structure of yeast Puf4p RNA binding domain in complex with HO-4BE mutant RNA
分子名称: 5'-R(*UP*GP*UP*AP*UP*CP*AP*UP*A)-3', Pumilio homology domain family member 4
著者Qiu, C, Hall, T.M.T.
登録日2012-03-01
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.
Proc.Natl.Acad.Sci.USA, 109, 2012
1IB2
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BU of 1ib2 by Molmil
CRYSTAL STRUCTURE OF A PUMILIO-HOMOLOGY DOMAIN
分子名称: BETA-MERCAPTOETHANOL, PUMILIO 1
著者Wang, X, Zamore, P.D, Hall, T.M.T.
登録日2001-03-26
公開日2001-05-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Pumilio homology domain.
Mol.Cell, 7, 2001
4WZW
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BU of 4wzw by Molmil
Crystal structure of human Puf-A in complex with DNA
分子名称: DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), Pumilio domain-containing protein KIAA0020
著者Qiu, C, Hall, T.M.T.
登録日2014-11-20
公開日2014-12-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9516 Å)
主引用文献A divergent Pumilio repeat protein family for pre-rRNA processing and mRNA localization.
Proc.Natl.Acad.Sci.USA, 111, 2014
6WPI
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BU of 6wpi by Molmil
Crystal structure of Nop9 in complex with ITS1 RNA
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, GLYCEROL, Nucleolar protein 9, ...
著者Zhang, J, Qiu, C, Hall, T.M.T.
登録日2020-04-27
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Nop9 recognizes structured and single-stranded RNA elements of preribosomal RNA.
Rna, 26, 2020
4WZR
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BU of 4wzr by Molmil
Crystal structure of human Puf-A
分子名称: GLYCEROL, Pumilio domain-containing protein KIAA0020
著者Qiu, C, Hall, T.M.T.
登録日2014-11-20
公開日2014-12-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献A divergent Pumilio repeat protein family for pre-rRNA processing and mRNA localization.
Proc.Natl.Acad.Sci.USA, 111, 2014
5BZ5
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BU of 5bz5 by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to AMN1 RNA
分子名称: RNA (5'-R(*UP*GP*UP*AP*AP*CP*UP*UP*UP*A)-3'), Suppressor protein MPT5
著者Qiu, C, Hall, T.M.T.
登録日2015-06-11
公開日2015-09-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
5BZV
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BU of 5bzv by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA
分子名称: RNA (5'-R(*UP*GP*UP*AP*CP*UP*AP*UP*A)-3'), Suppressor protein MPT5
著者Qiu, C, Hall, T.M.T.
登録日2015-06-11
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.354 Å)
主引用文献RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
2YJY
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BU of 2yjy by Molmil
A specific and modular binding code for cytosine recognition in PUF domains
分子名称: 5'-R(*AP*UP*UP*GP*CP*AP*UP*AP*UP*AP)-3', PUMILIO HOMOLOG 1
著者Dong, S, Wang, Y, Cassidy-Amstutz, C, Lu, G, Qiu, C, Bigler, R, Jezyk, M, Li, C, Hall, T.M.T, Wang, Z.
登録日2011-05-24
公開日2011-06-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Specific and Modular Binding Code for Cytosine Recognition in Pumilio/Fbf (Puf) RNA-Binding Domains.
J.Biol.Chem., 286, 2011
5T9P
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BU of 5t9p by Molmil
Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate
分子名称: CHLORIDE ION, Ribosome biogenesis protein 15, SULFATE ION
著者Zhang, J, Gonzalez, E.L, Hall, M.T.T.
登録日2016-09-09
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate.
Nucleic Acids Res., 45, 2017
8DGA
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BU of 8dga by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex IV
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DG7
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BU of 8dg7 by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex III
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DFV
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BU of 8dfv by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex IIa
分子名称: CALCIUM ION, Endoribonuclease Dcr-1, Loquacious, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-22
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DGJ
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BU of 8dgj by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ib
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DGI
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BU of 8dgi by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ia
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.94 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
8DG5
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BU of 8dg5 by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex IIb
分子名称: Endoribonuclease Dcr-1, Loquacious, isoform B, ...
著者Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
登録日2022-06-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
1G2E
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BU of 1g2e by Molmil
CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA
分子名称: 5'-R(P*UP*AP*UP*UP*UP*AP*UP*UP*UP*A)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD
著者Wang, X, Hall, T.M.T.
登録日2000-10-18
公開日2001-02-05
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for recognition of AU-rich element RNA by the HuD protein.
Nat.Struct.Biol., 8, 2001
1FXL
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BU of 1fxl by Molmil
CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA
分子名称: 5'-R(P*UP*UP*UP*UP*AP*UP*UP*UP*U)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD
著者Wang, X, Hall, T.M.T.
登録日2000-09-26
公開日2001-02-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for recognition of AU-rich element RNA by the HuD protein.
Nat.Struct.Biol., 8, 2001
5KL1
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BU of 5kl1 by Molmil
Crystal structure of the Pumilio-Nos-hunchback RNA complex
分子名称: Maternal protein pumilio, Protein nanos, RNA (5'-R(*AP*AP*AP*UP*UP*GP*UP*AP*CP*AP*UP*A)-3'), ...
著者Qiu, C, Hall, T.M.T.
登録日2016-06-23
公開日2016-08-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.701 Å)
主引用文献Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
5KL8
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BU of 5kl8 by Molmil
Crystal structure of the Pumilio-Nos-CyclinB RNA complex
分子名称: Maternal protein pumilio, Protein nanos, RNA (5'-R(*UP*AP*UP*UP*UP*GP*UP*AP*AP*UP*U)-3'), ...
著者Qiu, C, Hall, T.M.T.
登録日2016-06-23
公開日2016-08-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
5KLA
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BU of 5kla by Molmil
Crystal structure of the drosophila Pumilio RNA-binding domain in complex with hunchback RNA
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Maternal protein pumilio, ...
著者Qiu, C, Hall, T.M.T.
登録日2016-06-23
公開日2016-08-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
6NOC
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BU of 6noc by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y) in complex with 8-nt RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
著者McCann, K, Wang, Y, Qiu, C, Hall, T.M.T.
登録日2019-01-16
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.849 Å)
主引用文献Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019

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