Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5JOO
DownloadVisualize
BU of 5joo by Molmil
XFEL structure of influenza A M2 wild type TM domain at low pH in the lipidic cubic phase at room temperature
分子名称: CALCIUM ION, CHLORIDE ION, Matrix protein 2
著者Thomaston, J.L, Woldeyes, R.A, Fraser, J.S, DeGrado, W.F.
登録日2016-05-02
公開日2017-08-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献XFEL structures of the influenza M2 proton channel: Room temperature water networks and insights into proton conduction.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1YOD
DownloadVisualize
BU of 1yod by Molmil
Crystal structure of a water soluble analog of phospholamban
分子名称: water-solublized phospholamban
著者Slovic, A.M, Stayrook, S.E, North, B, DeGrado, W.F.
登録日2005-01-27
公開日2005-04-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structure of a water-soluble analog of the membrane protein phospholamban: sequence determinants defining the topology of tetrameric and pentameric coiled coils.
J.Mol.Biol., 348, 2005
1Y47
DownloadVisualize
BU of 1y47 by Molmil
Structural studies of designed alpha-helical hairpins
分子名称: CADMIUM ION, dueferri (DF2)
著者Lahr, S.J, Engel, D.E, Stayrook, S.E, Maglio, O, North, B, Geremia, S, Lombardi, A, DeGrado, W.F.
登録日2004-11-30
公開日2005-03-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Analysis and design of turns in alpha-helical hairpins
J.Mol.Biol., 346, 2005
2A3D
DownloadVisualize
BU of 2a3d by Molmil
SOLUTION STRUCTURE OF A DE NOVO DESIGNED SINGLE CHAIN THREE-HELIX BUNDLE (A3D)
分子名称: PROTEIN (DE NOVO THREE-HELIX BUNDLE)
著者Walsh, S.T.R, Cheng, H, Bryson, J.W, Roder, H, Degrado, W.F.
登録日1999-04-01
公開日1999-05-05
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of a de novo designed three-helix bundle protein.
Proc.Natl.Acad.Sci.USA, 96, 1999
6US9
DownloadVisualize
BU of 6us9 by Molmil
Influenza A M2 proton channel wild type TM domain bound to R-rimantadine
分子名称: CHLORIDE ION, Matrix protein 2, RIMANTADINE
著者Thomaston, J.L, DeGrado, W.F.
登録日2019-10-25
公開日2020-10-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rimantadine Binds to and Inhibits the Influenza A M2 Proton Channel without Enantiomeric Specificity.
Biochemistry, 2021
6US8
DownloadVisualize
BU of 6us8 by Molmil
Influenza A M2 proton channel wild type TM domain bound to S-rimantadine
分子名称: (1S)-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-amine, CHLORIDE ION, Matrix protein 2
著者Thomaston, J.L, DeGrado, W.F.
登録日2019-10-25
公開日2020-10-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Rimantadine Binds to and Inhibits the Influenza A M2 Proton Channel without Enantiomeric Specificity.
Biochemistry, 2021
1QP6
DownloadVisualize
BU of 1qp6 by Molmil
SOLUTION STRUCTURE OF ALPHA2D
分子名称: PROTEIN (ALPHA2D)
著者Hill, R.B, DeGrado, W.F.
登録日1999-06-01
公開日1999-06-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of Alpha2D, A Nativelike De Novo Designed Protein
J.Am.Chem.Soc., 120, 1998
2KQT
DownloadVisualize
BU of 2kqt by Molmil
Solid-state NMR structure of the M2 transmembrane peptide of the influenza A virus in DMPC lipid bilayers bound to deuterated amantadine
分子名称: (3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine, M2 protein
著者Cady, S.D, Schmidt-Rohr, K, Wang, J, Soto, C.S, DeGrado, W.F, Hong, M.
登録日2009-11-18
公開日2010-02-09
最終更新日2024-05-08
実験手法SOLID-STATE NMR
主引用文献Structure of the amantadine binding site of influenza M2 proton channels in lipid bilayers
Nature, 463, 2010
3LBW
DownloadVisualize
BU of 3lbw by Molmil
High resolution crystal structure of transmembrane domain of M2
分子名称: 4-bromobenzoic acid, DI(HYDROXYETHYL)ETHER, M2 protein, ...
著者Acharya, R, Polishchuk, A.L, DeGrado, W.F.
登録日2010-01-08
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and mechanism of proton transport through the transmembrane tetrameric M2 protein bundle of the influenza A virus.
Proc.Natl.Acad.Sci.USA, 107, 2010
5C02
DownloadVisualize
BU of 5c02 by Molmil
Influenza A M2 transmembrane domain drug-resistant S31N mutant at pH 8.0
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, CHLORIDE ION, ...
著者Thomaston, J.L, DeGrado, W.F.
登録日2015-06-12
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Crystal structure of the drug-resistant S31N influenza M2 proton channel.
Protein Sci., 25, 2016
5ET3
DownloadVisualize
BU of 5et3 by Molmil
Crystal Structure of De novo Designed Fullerene organizing peptide
分子名称: (C_{60}-I_{h})[5,6]fullerene, Fullerene Organizing Protein (C60Sol-COP-3)
著者Kim, K.-H, Kim, Y.H, Acharya, R, Kim, N.H, Paul, J, Grigoryan, G, DeGrado, W.F.
登録日2015-11-17
公開日2016-05-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.671 Å)
主引用文献Protein-directed self-assembly of a fullerene crystal.
Nat Commun, 7, 2016
3S0R
DownloadVisualize
BU of 3s0r by Molmil
Crystal Structure of De novo Designed helical assembly protein
分子名称: De novo designed Helical Assembly
著者Acharya, R, Grigoryan, G, Kim, Y.H, DeGrado, W.F.
登録日2011-05-13
公開日2011-06-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.453 Å)
主引用文献Computational design of virus-like protein assemblies on carbon nanotube surfaces.
Science, 332, 2011
2MUZ
DownloadVisualize
BU of 2muz by Molmil
ssNMR structure of a designed rocker protein
分子名称: designed rocker protein
著者Wang, T, Joh, N, Wu, Y, DeGrado, W.F, Hong, M.
登録日2014-09-18
公開日2014-12-24
最終更新日2015-01-14
実験手法SOLUTION NMR
主引用文献De novo design of a transmembrane Zn2+-transporting four-helix bundle.
Science, 346, 2014
1COI
DownloadVisualize
BU of 1coi by Molmil
DESIGNED TRIMERIC COILED COIL-VALD
分子名称: COIL-VALD, SULFATE ION
著者Ogihara, N.L, Weiss, M.S, Degrado, W.F, Eisenberg, D.
登録日1996-08-10
公開日1997-02-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of the designed trimeric coiled coil coil-VaLd: implications for engineering crystals and supramolecular assemblies.
Protein Sci., 6, 1997
1AL1
DownloadVisualize
BU of 1al1 by Molmil
CRYSTAL STRUCTURE OF ALPHA1: IMPLICATIONS FOR PROTEIN DESIGN
分子名称: ALPHA HELIX PEPTIDE: ELLKKLLEELKG, SULFATE ION
著者Hill, C.P, Anderson, D.H, Wesson, L, Degrado, W.F, Eisenberg, D.
登録日1990-07-02
公開日1991-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of alpha 1: implications for protein design.
Science, 249, 1990
6MJH
DownloadVisualize
BU of 6mjh by Molmil
The S31N mutant of the influenza A M2 proton channel in two distinct conformational states
分子名称: CALCIUM ION, CHLORIDE ION, Matrix protein 2
著者Thomaston, J.L, DeGrado, W.F.
登録日2018-09-20
公開日2019-06-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献X-ray Crystal Structure of the Influenza A M2 Proton Channel S31N Mutant in Two Conformational States: An Open and Shut Case.
J.Am.Chem.Soc., 141, 2019
6MQU
DownloadVisualize
BU of 6mqu by Molmil
PL5, synthetic transmembrane domain variant of human phospholamban
分子名称: PL5, designed TM pentamer
著者Mravic, M, Thomaston, J.L, DeGrado, W.F.
登録日2018-10-10
公開日2019-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Packing of apolar side chains enables accurate design of highly stable membrane proteins.
Science, 363, 2019
6MQ2
DownloadVisualize
BU of 6mq2 by Molmil
De Novo Design of membrane protein--mini-eVgL membrane protein, C2221 form-2
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, mini-eVgL membrane protein
著者Mravic, M, Liu, L, Degrado, W.F.
登録日2018-10-09
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Packing of apolar side chains enables accurate design of highly stable membrane proteins.
Science, 363, 2019
6MPW
DownloadVisualize
BU of 6mpw by Molmil
De Novo Design of membrane protein--mini-eVgL membrane protein, C2221 form-1
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, mini-eVgL membrane protein
著者Mravic, M, Liu, L, DeGrado, W.F.
登録日2018-10-08
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Packing of apolar side chains enables accurate design of highly stable membrane proteins.
Science, 363, 2019
6O3N
DownloadVisualize
BU of 6o3n by Molmil
Cross-alpha Amyloid-like Structure alphaAmA
分子名称: Cross-alpha Amyloid-like Structure alphaAmA
著者Zhang, S.-Q, Liu, L, DeGrado, W.F.
登録日2019-02-26
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Designed peptides that assemble into cross-alpha amyloid-like structures
Nat. Chem. Biol., 14, 2018
6NV1
DownloadVisualize
BU of 6nv1 by Molmil
Structure of drug-resistant V27A mutant of the influenza M2 proton channel bound to spiroadamantyl amine inhibitor
分子名称: (1r,1'S,3'S,5'S,7'S)-spiro[cyclohexane-1,2'-tricyclo[3.3.1.1~3,7~]decan]-4-amine, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, ...
著者Thomaston, J.L, Liu, L, DeGrado, W.F.
登録日2019-02-04
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献X-ray Crystal Structures of the Influenza M2 Proton Channel Drug-Resistant V27A Mutant Bound to a Spiro-Adamantyl Amine Inhibitor Reveal the Mechanism of Adamantane Resistance.
Biochemistry, 59, 2020
4JFX
DownloadVisualize
BU of 4jfx by Molmil
Structure of phosphotyrosine (pTyr) scaffold bound to pTyr peptide
分子名称: Fab heavy chain, Fab light chain, Phosphopeptide, ...
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-09-25
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013
4JFZ
DownloadVisualize
BU of 4jfz by Molmil
Structure of phosphoserine (pSAb) scaffold bound to pSer peptide
分子名称: Fab heavy chain, Fab light chain, PROPANOIC ACID, ...
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-08-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013
4JG1
DownloadVisualize
BU of 4jg1 by Molmil
Structure of phosphoserine/threonine (pSTAb) scaffold bound to pThr peptide
分子名称: Fab heavy chain, Fab light chain, PROPANOIC ACID, ...
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-08-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013
4JG0
DownloadVisualize
BU of 4jg0 by Molmil
Structure of phosphoserine/threonine (pSTAb) scaffold bound to pSer peptide
分子名称: Fab heavy chain, Fab light chain, PROPANOIC ACID, ...
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-08-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon