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2JXN
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BU of 2jxn by Molmil
Solution Structure of S. cerevisiae PDCD5-like Protein Ymr074cp
分子名称: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, Uncharacterized protein YMR074C
著者Hong, J, Zhang, J, Liu, Z, Shi, Y, Wu, J.
登録日2007-11-23
公開日2008-12-02
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Solution Structure and Dynamics of S. cerevisiae PDCD5-like Protein Ymr074cp Determined by Heteronuclear NMR Spectroscopy
To be Published
7DQZ
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BU of 7dqz by Molmil
Crystal structure of SARS 3C-like protease in apo form
分子名称: 3C-like proteinase
著者Zhang, Y.T, Gao, H.X, Zhou, H, Zhong, F.L, Hu, X.H, Zhou, X.L, Lin, C, Wang, Q.S, Li, J, Zhang, J.
登録日2020-12-24
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure-Based Discovery and Structural Basis of a Novel Broad-Spectrum Natural Product against the Main Protease of Coronavirus.
J.Virol., 96, 2022
2M80
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BU of 2m80 by Molmil
Solution structure of yeast dithiol glutaredoxin Grx8
分子名称: Glutaredoxin-8
著者Tang, Y, Zhang, J, Yu, J, Wu, J, Zhou, C.Z, Shi, Y.
登録日2013-05-02
公開日2014-05-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure-guided activity enhancement and catalytic mechanism of yeast grx8
Biochemistry, 53, 2014
7XF3
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BU of 7xf3 by Molmil
The structure of HLA-B*1501/BM58-66AF9
分子名称: 9-mer peptide from Matrix protein 1, Beta-2-microglobulin, MHC class I antigen
著者Zhao, Y.Z, Xiao, W.L, Wu, Y.N, Fan, W.F, Yue, C, Zhang, Q.X, Zhang, D.N, Yuan, X.J, Yao, S.J, Liu, S, Li, M, Wang, P.Y, Zhang, H.J, Zhang, J, Zhao, M, Zheng, X.Q, Liu, W.J, Gao, G.F, Liu, W.L.
登録日2022-03-31
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Parallel T Cell Immunogenic Regions in Influenza B and A Viruses with Distinct Nuclear Export Signal Functions: The Balance between Viral Life Cycle and Immune Escape.
J Immunol., 210, 2023
7N97
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BU of 7n97 by Molmil
State 2 of TcdB and FZD2 at pH5
分子名称: Frizzled-2, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-17
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structural Basis for Receptor Recognition of the Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N8X
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BU of 7n8x by Molmil
Partial C. difficile TcdB and CSPG4 fragment
分子名称: Chondroitin sulfate proteoglycan 4, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-16
公開日2022-03-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
8H91
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BU of 8h91 by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with nanobody N19
分子名称: Spike protein S1, nanobody
著者Zhang, Y.T, Li, J, Zhang, J.
登録日2022-10-24
公開日2023-11-01
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with nanobody N19
To Be Published
7N9Q
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BU of 7n9q by Molmil
State 3 of TcdB and FZD2 at pH5
分子名称: Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N9R
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BU of 7n9r by Molmil
state 4 of TcdB and FZD2 at pH5
分子名称: Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N9S
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BU of 7n9s by Molmil
TcdB and frizzled-2 CRD complex
分子名称: Frizzled-2, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N9Y
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BU of 7n9y by Molmil
Full-length TcdB and CSPG4 (401-560) complex
分子名称: Chondroitin sulfate proteoglycan 4, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N95
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BU of 7n95 by Molmil
state 1 of TcdB and FZD2 at pH5
分子名称: Frizzled-2, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-16
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7R81
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BU of 7r81 by Molmil
Structure of the translating Neurospora crassa ribosome arrested by cycloheximide
分子名称: 18S rRNA, 26S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Shen, L, Su, Z, Yang, K, Wu, C, Becker, T, Bell-Pedersen, D, Zhang, J, Sachs, M.S.
登録日2021-06-25
公開日2021-12-01
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure of the translating Neurospora ribosome arrested by cycloheximide
Proc.Natl.Acad.Sci.USA, 118, 2021
5ITU
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BU of 5itu by Molmil
Crystal Structure of Human NEIL1(242K) bound to duplex DNA containing THF
分子名称: DNA (5'-D(*CP*GP*TP*CP*CP*AP*CP*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'), Endonuclease 8-like 1
著者Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
登録日2016-03-17
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
5ITT
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BU of 5itt by Molmil
Crystal Structure of Human NEIL1 bound to duplex DNA containing THF
分子名称: DNA (26-MER), Endonuclease 8-like 1, GLYCEROL
著者Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
登録日2016-03-17
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
5ITR
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BU of 5itr by Molmil
Crystal Structure of Human NEIL1(P2G) bound to duplex DNA containing THF
分子名称: DNA (26-MER), Endonuclease 8-like 1
著者Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
登録日2016-03-17
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
3TKZ
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BU of 3tkz by Molmil
Structure of the SHP-2 N-SH2 domain in a 1:2 complex with RVIpYFVPLNR peptide
分子名称: PROTEIN (RVIpYFVPLNR peptide), Tyrosine-protein phosphatase non-receptor type 11
著者Zhang, Y, Zhang, J, Yuan, C, Hard, R.L, Park, I.H, Li, C, Bell, C.E, Pei, D.
登録日2011-08-29
公開日2011-10-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Simultaneous binding of two peptidyl ligands by a SRC homology 2 domain.
Biochemistry, 50, 2011
3TL0
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BU of 3tl0 by Molmil
Structure of SHP2 N-SH2 domain in complex with RLNpYAQLWHR peptide
分子名称: RLNpYAQLWHR peptide, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 11
著者Zhang, Y, Zhang, J, Yuan, C, Hard, R.L, Park, I.H, Li, C, Bell, C.E, Pei, D.
登録日2011-08-29
公開日2011-09-28
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Simultaneous binding of two peptidyl ligands by a SRC homology 2 domain.
Biochemistry, 50, 2011
2KU3
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BU of 2ku3 by Molmil
Solution structure of BRD1 PHD1 finger
分子名称: Bromodomain-containing protein 1, ZINC ION
著者Qin, S, Zhang, J, Wu, J, Shi, Y.
登録日2010-02-12
公開日2011-02-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of BRD1 PHD1 finger
To be Published
2LKZ
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BU of 2lkz by Molmil
Solution structure of the second RRM domain of RBM5
分子名称: RNA-binding protein 5
著者Song, Z, Wu, P, Zhang, J, Wu, J, Shi, Y.
登録日2011-10-23
公開日2012-08-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second RRM domain of RBM5 and its unusual binding characters for different RNA targets
Biochemistry, 2012
2JXW
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BU of 2jxw by Molmil
Solution Structure of the Tandem WW Domains of FBP21
分子名称: WW domain-binding protein 4
著者Huang, X, Zhang, J, Wu, J, Shi, Y.
登録日2007-11-30
公開日2008-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of the two tandem WW domains of the pre-mRNA splicing factor FBP21 (formin-binding protein 21)
J.Biol.Chem., 284, 2009
2L43
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BU of 2l43 by Molmil
Structural basis for histone code recognition by BRPF2-PHD1 finger
分子名称: Histone H3.3,LINKER,Bromodomain-containing protein 1, ZINC ION
著者Qin, S, Zhang, J, Wu, J, Shi, Y.
登録日2010-10-01
公開日2011-08-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Recognition of unmodified histone H3 by the first PHD finger of Bromodomain-PHD finger protein 2 provides insights into the regulation of histone acetyltransferases MOZ and MORF
To be Published
2KXJ
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BU of 2kxj by Molmil
Solution structure of UBX domain of human UBXD2 protein
分子名称: UBX domain-containing protein 4
著者Wu, Q, Huang, H, Zhang, J, Hu, Q, Wu, J, Shi, Y.
登録日2010-05-06
公開日2011-05-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution strcture of UBX domain of human UBXD2 protein
To be Published
5V93
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BU of 5v93 by Molmil
Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Yang, K, Chang, J.-Y, Cui, Z, Li, X, Meng, R, Duan, L, Thongchol, J, Jakana, J, Huwe, C, Sacchettini, J, Zhang, J.
登録日2017-03-22
公開日2017-09-20
最終更新日2020-08-12
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insights into species-specific features of the ribosome from the human pathogen Mycobacterium tuberculosis.
Nucleic Acids Res., 45, 2017
7VTC
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BU of 7vtc by Molmil
Crystal structure of MERS main protease in complex with PF07321332
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
著者Lin, C, Zhong, F.L, Zhou, X.L, Zhang, J, Li, J.
登録日2021-10-28
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.53865623 Å)
主引用文献Structural Basis of the Main Proteases of Coronavirus Bound to Drug Candidate PF-07321332.
J.Virol., 96, 2022

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