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7YOW
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BU of 7yow by Molmil
Crystal structure of SARS-CoV-2 omicron variant spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: Fab Heavy chain, Fab Light chain, SULFATE ION, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-08-02
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
2OH4
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BU of 2oh4 by Molmil
Crystal structure of Vegfr2 with a benzimidazole-urea inhibitor
分子名称: METHYL (5-{4-[({[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-1H-BENZIMIDAZOL-2-YL)CARBAMATE, SULFATE ION, Vascular endothelial growth factor receptor 2
著者Nolte, R.T, Wang, L.
登録日2007-01-09
公開日2007-09-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of Novel Benzimidazoles as Potent Inhibitors of TIE-2 and VEGFR-2 Tyrosine Kinase Receptors.
J.Med.Chem., 50, 2007
1J3N
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BU of 1j3n by Molmil
Crystal Structure of 3-oxoacyl-(acyl-carrier protein) Synthase II from Thermus thermophilus HB8
分子名称: 3-oxoacyl-(acyl-carrier protein) synthase II, CITRIC ACID, MAGNESIUM ION
著者Bagautdinov, B, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-02-10
公開日2003-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of 3-oxoacyl-(acyl-carrier protein) synthase II from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 64, 2008
1BYO
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BU of 1byo by Molmil
WILD-TYPE PLASTOCYANIN FROM SILENE
分子名称: COPPER (II) ION, PROTEIN (PLASTOCYANIN)
著者Sugawara, H, Inoue, T, Li, C, Gotowda, M, Hibino, T, Takabe, T, Kai, Y.
登録日1998-10-19
公開日1999-10-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of wild-type and mutant plastocyanins from a higher plant, Silene.
J.Biochem.(Tokyo), 125, 1999
1BYP
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BU of 1byp by Molmil
E43K,D44K DOUBLE MUTANT PLASTOCYANIN FROM SILENE
分子名称: COPPER (II) ION, PROTEIN (PLASTOCYANIN)
著者Sugawara, H, Inoue, T, Li, C, Gotowda, M, Hibino, T, Takabe, T, Kai, Y.
登録日1998-10-19
公開日1999-10-19
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structures of wild-type and mutant plastocyanins from a higher plant, Silene.
J.Biochem.(Tokyo), 125, 1999
7WN2
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BU of 7wn2 by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG53 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-17
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
7WNB
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BU of 7wnb by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-18
公開日2023-04-19
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
4OP2
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GKRP bound to AMG-0471 and Sorbitol-6-Phosphate
分子名称: (2S)-2-{4'-[(6-aminopyridin-3-yl)sulfonyl]biphenyl-4-yl}-1,1,1-trifluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者Jordan, S.R, Chmait, S.
登録日2014-02-04
公開日2014-07-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Small Molecule Disruptors of the Glucokinase-Glucokinase Regulatory Protein Interaction: 5. A Novel Aryl Sulfone Series, Optimization Through Conformational Analysis.
J.Med.Chem., 58, 2015
4OP3
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BU of 4op3 by Molmil
Human GKRP bound to AMG-5112 and Sorbitol-6-phosphate
分子名称: (2S)-2-{6'-[(6-aminopyridin-3-yl)sulfonyl]-2'-(phenylamino)-2,3'-bipyridin-5-yl}-1,1,1-trifluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者Jordan, S.R, Chmait, S.
登録日2014-02-04
公開日2014-07-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Small Molecule Disruptors of the Glucokinase-Glucokinase Regulatory Protein Interaction: 5. A Novel Aryl Sulfone Series, Optimization Through Conformational Analysis.
J.Med.Chem., 58, 2015
4OP1
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BU of 4op1 by Molmil
GKRP bound to AMG0556 and Sorbitol-6-Phosphate
分子名称: (2S)-2-(6-{5-[(6-aminopyridin-3-yl)sulfonyl]thiophen-2-yl}-5-chloropyridin-3-yl)-1,1,1-trifluoropropan-2-ol, D-SORBITOL-6-PHOSPHATE, GLYCEROL, ...
著者Jordan, S.R, Chmait, S.
登録日2014-02-04
公開日2014-07-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Small Molecule Disruptors of the Glucokinase-Glucokinase Regulatory Protein Interaction: 5. A Novel Aryl Sulfone Series, Optimization Through Conformational Analysis.
J.Med.Chem., 58, 2015
2ED3
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BU of 2ed3 by Molmil
Mutant I127M structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-14
公開日2007-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutant I127M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2EEQ
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BU of 2eeq by Molmil
Mutant Y29M structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-16
公開日2007-08-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutant Y29M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2ENU
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BU of 2enu by Molmil
Mutant L121M structure of TTHB049 from Thermus thermophilus HB8
分子名称: Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-28
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mutant L121M structure of TTHB049 from Thermus thermophilus HB8
To be Published
2EEY
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BU of 2eey by Molmil
Structure of GK0241 protein from Geobacillus kaustophilus
分子名称: Molybdopterin biosynthesis
著者Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-19
公開日2008-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure of GK0241 protein from Geobacillus kaustophilus
To be Published
2ED5
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BU of 2ed5 by Molmil
Mutant S147M structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-14
公開日2007-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mutant S147M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2E55
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BU of 2e55 by Molmil
Structure of AQ2163 protein from Aquifex aeolicus
分子名称: SULFATE ION, Uracil phosphoribosyltransferase
著者Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-19
公開日2008-01-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of AQ2163 protein from Aquifex aeolicus
To be Published
2ENI
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BU of 2eni by Molmil
Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-28
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
1WDE
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BU of 1wde by Molmil
Crystal structure of the conserved hypothetical protein APE0931 from Aeropyrum pernix K1
分子名称: Probable diphthine synthase
著者Kishishita, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-13
公開日2004-11-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of two archaeal diphthine synthases: insights into the post-translational modification of elongation factor 2.
Acta Crystallogr.,Sect.D, 64, 2008
7C8I
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BU of 7c8i by Molmil
Ambient temperature structure of Bifidobacgterium longum phosphoketolase with thiamine diphosphate and phosphoenol pyuruvate
分子名称: CALCIUM ION, PHOSPHOENOLPYRUVATE, THIAMINE DIPHOSPHATE, ...
著者Nakata, K, Kashiwagi, T, Nango, E, Miyano, H, Mizukoshi, T, Iwata, S.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ambient temperature structure of phosphoketolase from Bifidobacterium longum determined by serial femtosecond X-ray crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
7C8H
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BU of 7c8h by Molmil
Ambient temperature structure of Bifidobacterium longum phosphoketolase with thiamine diphosphate
分子名称: (2S)-2-hydroxybutanedioic acid, CALCIUM ION, MALONIC ACID, ...
著者Nakata, K, Kashiwagi, T, Nango, E, Miyano, H, Mizukoshi, T, Iwata, S.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ambient temperature structure of phosphoketolase from Bifidobacterium longum determined by serial femtosecond X-ray crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
2ZFH
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BU of 2zfh by Molmil
Crystal structure of putative CutA1 from Homo sapiens at 2.05A resolution
分子名称: CutA
著者Bagautdinov, B, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-07
公開日2008-01-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of putative CutA1 from Homo sapiens determined at 2.05 A resolution.
Acta Crystallogr.,Sect.F, 64, 2008
2DSL
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BU of 2dsl by Molmil
Mutant N33D structure of phenylacetic acid degradation protein PaaI from Thermus thermophilus HB8
分子名称: CHLORIDE ION, MAGNESIUM ION, Phenylacetic acid degradation protein PaaI
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-06-30
公開日2006-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mutant N33D structure of phenylacetic acid degradation protein PaaI from Thermus thermophilus HB8
To be Published
2DVK
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BU of 2dvk by Molmil
Crystal Structure of Hypothetical protein from Aeropyrum pernix
分子名称: UPF0130 protein APE0816
著者Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-07-31
公開日2007-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Hypothetical protein from Aeropyrum pernix
To be Published
2DEK
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BU of 2dek by Molmil
Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution
分子名称: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-02-10
公開日2006-07-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution
To be Published
2ZVC
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BU of 2zvc by Molmil
Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
分子名称: Precorrin-3 C17-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-11-04
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
To be published

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