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2YX1
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Crystal structure of M.jannaschii tRNA m1G37 methyltransferase
分子名称: Hypothetical protein MJ0883, SINEFUNGIN, ZINC ION
著者Goto-Ito, S, Ito, T, Ishii, R, Bessho, Y, Yokoyama, S.
登録日2007-04-23
公開日2008-04-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of archaeal tRNA(m(1)G37)methyltransferase aTrm5.
Proteins, 72, 2008
2YY9
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BU of 2yy9 by Molmil
Crystal structure of BTB domain from mouse HKR3
分子名称: Zinc finger and BTB domain-containing protein 48
著者Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-04-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of BTB domain from mouse HKR3
To be Published
2YZO
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BU of 2yzo by Molmil
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
分子名称: D-MALATE, Probable 2-phosphosulfolactate phosphatase
著者Nakagawa, N, Nakamura, Y, Bessho, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2012-02-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
2YZV
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BU of 2yzv by Molmil
ADP-ribosylglycohydrolase-related protein complex
分子名称: ADP-ribosylglycohydrolase, MAGNESIUM ION
著者Ebihara, A, Manzoku, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献ADP-ribosylglycohydrolase-related protein complex
To be Published
2Z07
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BU of 2z07 by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
分子名称: Putative uncharacterized protein TTHA0978
著者Iino, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2Z0Y
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BU of 2z0y by Molmil
Crystal structure of TTHA0657-SAM complex
分子名称: Putative uncharacterized protein TTHA0657, S-ADENOSYLMETHIONINE
著者Murayama, K, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of TTHA0657-SAM complex
To be Published
2YSP
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BU of 2ysp by Molmil
Solution structure of the C2H2 type zinc finger (region 507-539) of human Zinc finger protein 224
分子名称: ZINC ION, Zinc finger protein 224
著者Takahashi, M, Kuwasako, K, Tsuda, K, Tanabe, W, Harada, T, Watanabe, S, Tochio, N, Muto, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc finger (region 507-539)of human Zinc finger protein 224
To be Published
2YT5
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BU of 2yt5 by Molmil
Solution structure of the PHD domain of Metal-response element-binding transcription factor 2
分子名称: Metal-response element-binding transcription factor 2, ZINC ION
著者Masuda, K, Muto, Y, Isono, K, Watanabe, S, Harada, T, Kigawa, T, Koseki, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PHD domain of Metal-response element-binding transcription factor 2
To be Published
2YTF
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BU of 2ytf by Molmil
Solution structure of the C2H2 type zinc finger (region 607-639) of human Zinc finger protein 268
分子名称: ZINC ION, Zinc finger protein 268
著者Tomizawa, T, Tochio, N, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc finger (region 607-639) of human Zinc finger protein 268
To be Published
2YTQ
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BU of 2ytq by Molmil
Solution structure of the C2H2 type zinc finger (region 775-807) of human Zinc finger protein 268
分子名称: ZINC ION, Zinc finger protein 268
著者Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc finger (region 775-807) of human Zinc finger protein 268
To be Published
2YV3
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BU of 2yv3 by Molmil
Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Thermus thermophilus HB8
分子名称: Aspartate-semialdehyde dehydrogenase
著者Kagawa, W, Fujikawa, N, Kurumizaka, H, Bessho, Y, Ellis, M.J, Antonyuk, S.V, Strange, R.W, Hasnain, S.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-07
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Thermus thermophilus HB8
To be Published
2YW5
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BU of 2yw5 by Molmil
Solution structure of the bromodomain from human bromodomain containing protein 3
分子名称: Bromodomain-containing protein 3
著者Furue, M, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-19
公開日2008-04-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the bromodomain from human bromodomain containing protein 3
To be Published
3A3U
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BU of 3a3u by Molmil
Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, L(+)-TARTARIC ACID, Menaquinone biosynthetic enzyme, ...
著者Arai, R, Nishino, A, Nagano, K, Uchikubo-Kamo, T, Katsura, K, Nishimoto, M, Toyama, M, Terada, T, Kuramitsu, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-06-20
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
J.Struct.Biol., 168, 2009
1GD7
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BU of 1gd7 by Molmil
CRYSTAL STRUCTURE OF A BIFUNCTIONAL PROTEIN (CSAA) WITH EXPORT-RELATED CHAPERONE AND TRNA-BINDING ACTIVITIES.
分子名称: CSAA PROTEIN
著者Shibata, T, Inoue, Y, Vassylyev, D.G, Kawaguchi, S, Yokoyama, S, Muller, J, Linde, D, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-09-22
公開日2001-09-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.
EMBO J., 20, 2001
2ZZM
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BU of 2zzm by Molmil
The complex structure of aTrm5 and tRNALeu
分子名称: MAGNESIUM ION, RNA (84-MER), S-ADENOSYLMETHIONINE, ...
著者Goto-Ito, S, Ito, T, Yokoyama, S.
登録日2009-02-19
公開日2009-09-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Tertiary structure checkpoint at anticodon loop modification in tRNA functional maturation
Nat.Struct.Mol.Biol., 16, 2009
2YRN
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BU of 2yrn by Molmil
Solution structure of the CH domain from Human Neuron navigator 2
分子名称: Neuron navigator 2 isoform 4
著者Tomizawa, T, Tochio, N, Koshiba, S, Inoue, M, Nakamura, Y, Furukawa, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2008-02-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the CH domain from Human Neuron navigator 2
To be Published
2YUY
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BU of 2yuy by Molmil
Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
分子名称: Rho GTPase activating protein 21
著者Niraula, T.N, Yoneyama, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-06
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
To be Published
2YWD
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Crystal structure of glutamine amidotransferase
分子名称: Glutamine amidotransferase subunit pdxT
著者Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of glutamine amidotransferase
To be Published
2YWJ
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Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
分子名称: Glutamine amidotransferase subunit pdxT
著者Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
to be published
2ZUE
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BU of 2zue by Molmil
Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA(Arg) and an ATP analog (ANP)
分子名称: Arginyl-tRNA synthetase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Konno, M, Sumida, T, Uchikawa, E, Mori, Y, Yanagisawa, T, Sekine, S, Yokoyama, S.
登録日2008-10-16
公開日2009-08-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Modeling of tRNA-assisted mechanism of Arg activation based on a structure of Arg-tRNA synthetase, tRNA, and an ATP analog (ANP)
Febs J., 276, 2009
2Z1M
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Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
分子名称: GDP-D-mannose dehydratase, GUANOSINE-5'-DIPHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-09
公開日2007-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
To be Published
3ABH
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Crystal structure of the EFC/F-BAR domain of human PACSIN2/Syndapin II (2.0 A)
分子名称: Protein kinase C and casein kinase substrate in neurons protein 2
著者Shimada, A, Shirouzu, M, Hanawa-Suetsugu, K, Terada, T, Umehara, T, Suetsugu, S, Yamamoto, M, Yokoyama, S.
登録日2009-12-11
公開日2010-04-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mapping of the basic amino-acid residues responsible for tubulation and cellular protrusion by the EFC/F-BAR domain of pacsin2/Syndapin II
Febs Lett., 584, 2010
3ACO
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Crystal structure of the EFC/F-BAR domain of human PACSIN2/Syndapin II (2.7 A)
分子名称: CALCIUM ION, Protein kinase C and casein kinase substrate in neurons protein 2
著者Shimada, A, Shirouzu, M, Hanawa-Suetsugu, K, Terada, T, Umehara, T, Suetsugu, S, Yamamoto, M, Yokoyama, S.
登録日2010-01-07
公開日2010-04-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mapping of the basic amino-acid residues responsible for tubulation and cellular protrusion by the EFC/F-BAR domain of pacsin2/Syndapin II
Febs Lett., 584, 2010
2YXN
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Structual basis of azido-tyrosine recognition by engineered bacterial Tyrosyl-tRNA synthetase
分子名称: 3-AZIDO-L-TYROSINE, Tyrosyl-tRNA synthetase
著者Oki, K, Kobayashi, T, Sakamoto, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-26
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functional replacement of the endogenous tyrosyl-tRNA synthetase-tRNATyr pair by the archaeal tyrosine pair in Escherichia coli for genetic code expansion
Nucleic Acids Res., 38, 2010
2Z0L
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Crystal structure of EBV-DNA polymerase accessory protein BMRF1
分子名称: CHLORIDE ION, Early antigen protein D
著者Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2008-05-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of Epstein-Barr virus DNA polymerase processivity factor BMRF1
J.Biol.Chem., 284, 2009

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