Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1YNO
DownloadVisualize
BU of 1yno by Molmil
High Resolution Structure of Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamine Thiazolone Diphosphate
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2005-01-24
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献High Resolution Structure of Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamine Thiazolone Diphosphate;
To be Published
1PO7
DownloadVisualize
BU of 1po7 by Molmil
HIGH RESOLUTION STRUCTURE OF E28A MUTANT BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2003-06-13
公開日2004-11-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High Resolution Structure of E28A Mutant Benzoylformate Decarboxylase from Pseudomonas Putida
To be Published
1Q6Z
DownloadVisualize
BU of 1q6z by Molmil
HIGH RESOLUTION STRUCTURE OF E28A MUTANT BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA COMPLEXED WITH THIAMIN THIAZOLONE DIPHOSPHATE
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2003-08-14
公開日2004-11-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献High Resolution Structure of E28A Mutant Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamin Thiazolone Diphosphate
To be Published
1QNN
DownloadVisualize
BU of 1qnn by Molmil
Cambialistic superoxide dismutase from Porphyromonas gingivalis
分子名称: FE (III) ION, SUPEROXIDE DISMUTASE
著者Sugio, S, Hiraoka, B.Y, Yamakura, F.
登録日1999-10-20
公開日2000-06-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Cambialistic Superoxide Dismutase from Porphyromonas Gingivalis
Eur.J.Biochem., 267, 2000
1VGC
DownloadVisualize
BU of 1vgc by Molmil
GAMMA-CHYMOTRYPSIN L-PARA-CHLORO-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX
分子名称: GAMMA CHYMOTRYPSIN, L-1-(4-CHLOROPHENYL)-2-(ACETAMIDO)ETHANE BORONIC ACID, SULFATE ION
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-05-01
公開日1997-11-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
1CO7
DownloadVisualize
BU of 1co7 by Molmil
R117H mutant rat anionic trypsin complexed with bovine pancreatic trypsin inhibitor (BPTI)
分子名称: BOVINE PANCREATIC TRYPSIN INHIBITOR, CALCIUM ION, TRYPSIN II
著者Stamper, G.F, Ringe, D, Hedstrom, L.
登録日1999-06-07
公開日2003-01-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献

2VGC
DownloadVisualize
BU of 2vgc by Molmil
GAMMA-CHYMOTRYPSIN D-PARA-CHLORO-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX
分子名称: D-1-(4-CHLOROPHENYL)-2-(ACETAMIDO)ETHANE BORONIC ACID, GAMMA CHYMOTRYPSIN, SULFATE ION
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-05-01
公開日1997-11-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
3CXC
DownloadVisualize
BU of 3cxc by Molmil
The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui
分子名称: (3Z)-N-[(4E)-5-(4-{(5S)-5-[(acetylamino)methyl]-2-oxo-1,3-oxazolidin-3-yl}-2-fluorophenyl)pent-4-en-1-yl]-3-(4-methyl-2,6-dioxo-1,6-dihydropyrimidin-5(2H)-ylidene)propanamide, 23S RIBOSOMAL RNA, 5'-R(*CP*CP*A)-3', ...
著者Ippolito, J.A, Wang, D, Kanyo, Z.F, Duffy, E.M.
登録日2008-04-24
公開日2009-04-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Design at the atomic level: design of biaryloxazolidinones as potent orally active antibiotics.
Bioorg.Med.Chem.Lett., 18, 2008
7NFX
DownloadVisualize
BU of 7nfx by Molmil
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Jomaa, A, Lee, J.H, Shan, S, Ban, N.
登録日2021-02-08
公開日2021-06-02
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Receptor compaction and GTPase rearrangement drive SRP-mediated cotranslational protein translocation into the ER.
Sci Adv, 7, 2021
6HIZ
DownloadVisualize
BU of 6hiz by Molmil
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (143-MER), ...
著者Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boehringer, A, Schneider, A, Ban, N.
登録日2018-08-31
公開日2018-09-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
5NCO
DownloadVisualize
BU of 5nco by Molmil
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
分子名称: 23S rRNA, 4.5S SRP RNA (Ffs), 50S ribosomal protein L10, ...
著者Jomaa, A, Hwang Fu, Y, Boerhinger, D, Leibundgut, M, Shan, S.O, Ban, N.
登録日2017-03-06
公開日2017-05-24
最終更新日2018-03-28
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure of the quaternary complex between SRP, SR, and translocon bound to the translating ribosome.
Nat Commun, 8, 2017
6FXJ
DownloadVisualize
BU of 6fxj by Molmil
Structure of coproheme decarboxylase from Listeria monocytogenes in complex with iron coproporphyrin III
分子名称: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, CHLORIDE ION, N-PROPANOL, ...
著者Hofbauer, S, Pfanzagl, V, Mlynek, G.
登録日2018-03-09
公開日2019-07-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Redox Cofactor Rotates during Its Stepwise Decarboxylation: Molecular Mechanism of Conversion of Coproheme to Hemeb.
Acs Catalysis, 9, 2019
4U1D
DownloadVisualize
BU of 4u1d by Molmil
Structure of the PCI domain of translation initiation factor eIF3a
分子名称: Eukaryotic translation initiation factor 3 subunit A
著者Erzberger, J.P, Schaefer, T, Ban, N.
登録日2014-07-15
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Molecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex.
Cell, 158, 2014
4U1C
DownloadVisualize
BU of 4u1c by Molmil
Crystal structure of the eIF3a/eIF3c PCI-domain heterodimer
分子名称: Eukaryotic translation initiation factor 3 subunit A, Eukaryotic translation initiation factor 3 subunit C
著者Erzberger, J.P, Schaefer, T, Ban, N.
登録日2014-07-15
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex.
Cell, 158, 2014
4U1E
DownloadVisualize
BU of 4u1e by Molmil
Crystal structure of the eIF3b-CTD/eIF3i/eIF3g-NTD translation initiation complex
分子名称: Eukaryotic translation initiation factor 3 subunit B, Eukaryotic translation initiation factor 3 subunit G, Eukaryotic translation initiation factor 3 subunit I
著者Zhang, S, Erzberger, J.P, Schaefer, T, Ban, N.
登録日2014-07-15
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex.
Cell, 158, 2014
4U1F
DownloadVisualize
BU of 4u1f by Molmil
Crystal structure of middle domain of eukaryotic translation initiation factor eIF3b
分子名称: Eukaryotic translation initiation factor 3 subunit B
著者Zhang, S, Erzberger, J.P, Schaefer, T, Ban, N.
登録日2014-07-15
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex.
Cell, 158, 2014
7AEP
DownloadVisualize
BU of 7aep by Molmil
Solution structure of U1-A RRM2 (190-282)
分子名称: U1 small nuclear ribonucleoprotein A
著者Campagne, S, Allain, F.H.
登録日2020-09-18
公開日2021-02-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献An in vitro reconstituted U1 snRNP allows the study of the disordered regions of the particle and the interactions with proteins and ligands.
Nucleic Acids Res., 49, 2021
3J8C
DownloadVisualize
BU of 3j8c by Molmil
Model of the human eIF3 PCI-MPN octamer docked into the 43S EM map
分子名称: Eukaryotic translation initiation factor 3 subunit A, Eukaryotic translation initiation factor 3 subunit C, Eukaryotic translation initiation factor 3 subunit E, ...
著者Erzberger, J.P, Ban, N.
登録日2014-10-08
公開日2014-10-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.6 Å)
主引用文献Molecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex.
Cell(Cambridge,Mass.), 158, 2014
3JW0
DownloadVisualize
BU of 3jw0 by Molmil
E2~Ubiquitin-HECT
分子名称: E3 ubiquitin-protein ligase NEDD4-like, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2
著者Kamadurai, H.B, Schulman, B.A.
登録日2009-09-17
公開日2010-01-12
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Insights into ubiquitin transfer cascades from a structure of a UbcH5B approximately ubiquitin-HECT(NEDD4L) complex.
Mol.Cell, 36, 2009
3J8B
DownloadVisualize
BU of 3j8b by Molmil
Model of the human eIF3 PCI-MPN octamer docked into the 43S-HCV IRES EM map
分子名称: Eukaryotic translation initiation factor 3 subunit A, Eukaryotic translation initiation factor 3 subunit C, Eukaryotic translation initiation factor 3 subunit E, ...
著者Erzberger, J.P, Ban, N.
登録日2014-10-08
公開日2014-10-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Molecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex.
Cell(Cambridge,Mass.), 158, 2014
3JVZ
DownloadVisualize
BU of 3jvz by Molmil
E2~Ubiquitin-HECT
分子名称: E3 ubiquitin-protein ligase NEDD4-like, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2
著者Souphron, J, Kamadurai, H.B, Schulman, B.A.
登録日2009-09-17
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Insights into ubiquitin transfer cascades from a structure of a UbcH5B approximately ubiquitin-HECT(NEDD4L) complex.
Mol.Cell, 36, 2009
6FRK
DownloadVisualize
BU of 6frk by Molmil
Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Kobayashi, K, Jomaa, A, Ban, N.
登録日2018-02-16
公開日2018-03-28
最終更新日2018-05-02
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of a prehandover mammalian ribosomal SRP·SRP receptor targeting complex.
Science, 360, 2018

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon