Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8GOD
DownloadVisualize
BU of 8god by Molmil
Co-crystal structure of Human Protein-arginine deiminase type-4 (PAD4) with small molecule inhibitor JBI-589
分子名称: Protein-arginine deiminase type-4, [(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanone
著者Swaminathan, S, Birudukota, S, Vaithilingam, K, Kandan, S, Asaithambi, K, Kathiresan, N, Gosu, R, Rajagopal, S, Sadhu, N.
登録日2022-08-24
公開日2023-03-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Alleviation of arthritis through prevention of neutrophil extracellular traps by an orally available inhibitor of protein arginine deiminase 4.
Sci Rep, 13, 2023
6RTI
DownloadVisualize
BU of 6rti by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with aptamer A9g
分子名称: (2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Motlova, L, Kolenko, P, Barinka, C.
登録日2019-05-24
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of prostate-specific membrane antigen recognition by the A9g RNA aptamer.
Nucleic Acids Res., 48, 2020
1PVD
DownloadVisualize
BU of 1pvd by Molmil
CRYSTAL STRUCTURE OF THE THIAMIN DIPHOSPHATE DEPENDENT ENZYME PYRUVATE DECARBOXYLASE FROM THE YEAST SACCHAROMYCES CEREVISIAE AT 2.3 ANGSTROMS RESOLUTION
分子名称: MAGNESIUM ION, PYRUVATE DECARBOXYLASE, THIAMINE DIPHOSPHATE
著者Furey, W, Arjunan, P.
登録日1995-04-20
公開日1995-07-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution.
J.Mol.Biol., 256, 1996
5YGU
DownloadVisualize
BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
分子名称: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
著者Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
登録日2017-09-27
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
6CF7
DownloadVisualize
BU of 6cf7 by Molmil
Crystal structure of the A/Solomon Islands/3/2006(H1N1) influenza virus hemagglutinin in complex with small molecule JNJ4796
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Kadam, R.U, Wilson, I.A.
登録日2018-02-13
公開日2019-02-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.719 Å)
主引用文献A small-molecule fusion inhibitor of influenza virus is orally active in mice.
Science, 363, 2019
6TZS
DownloadVisualize
BU of 6tzs by Molmil
A DNA i-motif/duplex hybrid
分子名称: DNA (5'-D(*CP*CP*AP*GP*GP*CP*TP*GP*(CBR)P*AP*A)-3')
著者Chu, B, Paukstelis, P.J.
登録日2019-08-13
公開日2019-10-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A DNA G-quadruplex/i-motif hybrid.
Nucleic Acids Res., 47, 2019
6TZQ
DownloadVisualize
BU of 6tzq by Molmil
A DNA G-quadruplex/i-motif hybrid
分子名称: BARIUM ION, DNA (5'-D(*CP*CP*AP*GP*GP*CP*TP*GP*CP*AP*A)-3')
著者Chu, B, Paukstelis, P.J.
登録日2019-08-13
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献A DNA G-quadruplex/i-motif hybrid.
Nucleic Acids Res., 47, 2019
6TZR
DownloadVisualize
BU of 6tzr by Molmil
A DNA G-quadruplex/i-motif hybrid
分子名称: BARIUM ION, DNA (5'-D(*CP*CP*AP*GP*GP*CP*(BRU)P*GP*CP*AP*A)-3')
著者Chu, B, Paukstelis, P.J.
登録日2019-08-13
公開日2019-10-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A DNA G-quadruplex/i-motif hybrid.
Nucleic Acids Res., 47, 2019
4JBA
DownloadVisualize
BU of 4jba by Molmil
Crystal Structure of the Oxidized Form of MarR from E.coli
分子名称: Multiple antibiotic resistance protein MarR
著者Lou, H, Zhu, R, Hao, Z.
登録日2013-02-19
公開日2013-10-16
最終更新日2014-04-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli.
Nat.Chem.Biol., 10, 2014
7VRD
DownloadVisualize
BU of 7vrd by Molmil
Crystal structure of Enolase1 from Candida albicans complexed with 2'-phosphoglyceric acid sodium
分子名称: 2-PHOSPHOGLYCERIC ACID, Enolase 1, MAGNESIUM ION
著者Zhang, M, Zhang, X.
登録日2021-10-22
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Baicalein Acts against Candida albicans by Targeting Eno1 and Inhibiting Glycolysis.
Microbiol Spectr, 10, 2022
7V67
DownloadVisualize
BU of 7v67 by Molmil
Crystal Structure of Enolase1 from Candida albicans
分子名称: Enolase 1, SULFATE ION
著者Zhang, M, Zhang, X.
登録日2021-08-19
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Baicalein Acts against Candida albicans by Targeting Eno1 and Inhibiting Glycolysis.
Microbiol Spectr, 10, 2022
1NES
DownloadVisualize
BU of 1nes by Molmil
STRUCTURE OF THE PRODUCT COMPLEX OF ACETYL-ALA-PRO-ALA WITH PORCINE PANCREATIC ELASTASE AT 1.65 ANGSTROMS RESOLUTION
分子名称: ACETYL-ALA-PRO-ALA, CALCIUM ION, ELASTASE, ...
著者Meyer Junior, E.F, Radhakrishnan, R, M Cole, G, Presta, L.G.
登録日1995-07-31
公開日1996-01-29
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of the product complex of acetyl-Ala-Pro-Ala with porcine pancreatic elastase at 1.65 A resolution.
J.Mol.Biol., 189, 1986
3VOD
DownloadVisualize
BU of 3vod by Molmil
Crystal Structure of mutant MarR C80S from E.coli
分子名称: Multiple antibiotic resistance protein marR
著者Lou, H, Zhu, R, Hao, Z.
登録日2012-01-21
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli.
Nat.Chem.Biol., 10, 2014
6J2I
DownloadVisualize
BU of 6j2i by Molmil
Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with H17N10 influenza-like virus-derivrd peptide H17N10-NP
分子名称: Beta-2-microglobulin, H17N10-NP, Ptal-N*01:01
著者Lu, D, Liu, K.F, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, G.F, Liu, W.J.
登録日2019-01-01
公開日2019-09-18
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats.
Plos Biol., 17, 2019
5GSN
DownloadVisualize
BU of 5gsn by Molmil
Tmm in complex with methimazole
分子名称: 1-METHYL-1,3-DIHYDRO-2H-IMIDAZOLE-2-THIONE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase, ...
著者Zhang, Y.Z, Li, C.Y.
登録日2016-08-16
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N-oxide
Mol. Microbiol., 103, 2017
6J2J
DownloadVisualize
BU of 6j2j by Molmil
Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with MERS-CoV-derived peptide MERS-CoV-S3
分子名称: Beta-2-microglobulin, MERS-CoV-S3, Ptal-N*01:01
著者Lu, D, Liu, K.F, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, G.F, Liu, W.J.
登録日2019-01-01
公開日2019-09-18
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats.
Plos Biol., 17, 2019
8S9G
DownloadVisualize
BU of 8s9g by Molmil
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, S309 Fab Heavy chain, ...
著者Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
登録日2023-03-28
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Neutralization, effector function and immune imprinting of Omicron variants.
Nature, 621, 2023
7UCX
DownloadVisualize
BU of 7ucx by Molmil
LRP8 11H1 Fab complexed to a cyclized CR1 peptide
分子名称: 11H1 Fab Heavy chain, 11H1 Fab Light chain, Cyclized CR1 peptide, ...
著者Argiriadi, M.A, Deng, K, Egan, D, Gao, L, Gizatullin, F, Harlan, J, Karaoglu, D, Qiu, W, Goodearl, A.
登録日2022-03-17
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The use of cyclic peptide antigens to generate LRP8 specific antibodies
Front Drug Discov (Lausanne), 2, 2023
5IQ1
DownloadVisualize
BU of 5iq1 by Molmil
Crystal structure of RnTmm mutant Y207S
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, C.Y, Zhang, Y.Z.
登録日2016-03-10
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N-oxide
Mol. Microbiol., 103, 2017
5XKY
DownloadVisualize
BU of 5xky by Molmil
Crystal structure of DddY Se derivative
分子名称: Uncharacterized protein, ZINC ION
著者Li, C.Y, Zhang, Y.Z.
登録日2017-05-10
公開日2017-11-01
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
5XN6
DownloadVisualize
BU of 5xn6 by Molmil
Heterodimer crystal structure of geranylgeranyl diphosphate synthases 1 with GGPPS Recruiting Protein(OsGRP) from Oryza sativa
分子名称: Os02g0668100 protein, Os07g0580900 protein
著者Wang, C, Zhou, F, Lu, S, Zhang, P.
登録日2017-05-18
公開日2017-06-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.598 Å)
主引用文献A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TBP
DownloadVisualize
BU of 5tbp by Molmil
Crystal Structure of RXR-alpha ligand binding domain complexed with synthetic modulator K8003
分子名称: ACETATE ION, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Aleshin, A.E, Liddington, R.C, Su, Y, Zhang, X.
登録日2016-09-12
公開日2017-08-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Modulation of nongenomic activation of PI3K signalling by tetramerization of N-terminally-cleaved RXR alpha.
Nat Commun, 8, 2017
5XN5
DownloadVisualize
BU of 5xn5 by Molmil
Homo-dimer crystal structure of geranylgeranyl diphosphate synthases 1 from Oryza sativa
分子名称: Os07g0580900 protein
著者Wang, C, Zhou, F, Lu, S, Zhang, P.
登録日2017-05-18
公開日2017-06-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7RT7
DownloadVisualize
BU of 7rt7 by Molmil
Crystal structure of the RhsP2 C-terminal toxin domain in complex with its immunity protein, RhsI2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, RhsI2, RhsP2
著者Bullen, N.P, Prehna, G, Whitney, J.C.
登録日2021-08-12
公開日2022-08-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献An ADP-ribosyltransferase toxin kills bacterial cells by modifying structured non-coding RNAs.
Mol.Cell, 82, 2022
5XKX
DownloadVisualize
BU of 5xkx by Molmil
Crystal structure of WT DddY
分子名称: ACETATE ION, Uncharacterized protein, ZINC ION
著者Li, C.Y, Zhang, Y.Z.
登録日2017-05-10
公開日2017-11-01
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon