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8Y0F
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Solution NMR structure of the PTK7-binding DNA aptamer sgc8c
分子名称: DNA
著者He, A, Wan, L, Guo, P, Han, D.
登録日2024-01-22
公開日2024-06-26
最終更新日2024-07-24
実験手法SOLUTION NMR
主引用文献Structure-based investigation of a DNA aptamer targeting PTK7 reveals an intricate 3D fold guiding functional optimization.
Proc.Natl.Acad.Sci.USA, 121, 2024
7UFH
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Integrin alpha IIB beta3 complex with fradafiban (Mn/Ca)
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-22
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.99768162 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UDH
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Integrin alpha IIB beta3 complex with BMS4-3
分子名称: (4-{[(5S)-3-(piperidin-4-yl)-4,5-dihydro-1,2-oxazol-5-yl]methyl}piperazin-1-yl)acetic acid, 10E5 Fab heavy chain, 10E5 Fab light chain, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-19
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.99998844 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UK9
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Integrin alpha IIB beta3 complex with lamifiban (Mn)
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-31
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.60001969 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
6JW4
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Degenerate RVD RG forms a distinct loop conformation
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
7UCY
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BU of 7ucy by Molmil
Integrin alpha IIB beta3 complex with gantofiban
分子名称: (4-{[(5R)-3-(4-carbamimidoylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}piperazin-1-yl)acetic acid, 10E5 Fab heavy chain, 10E5 Fab light chain, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-17
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.34996319 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UKT
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Integrin alpha IIB beta3 complex with BMS4.2
分子名称: (1-{[(5S)-3-(4-carbamimidoylphenyl)-4,5-dihydro-1,2-oxazol-5-yl]methyl}piperidin-4-yl)acetic acid, 10E5 Fab heavy chain, 10E5 Fab light chain, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-04-01
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.36994433 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7U9V
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Integrin alpha IIB beta3 complex with BMS4-1
分子名称: (4-{[(5S)-3-(4-carbamimidoylphenyl)-4,5-dihydro-1,2-oxazol-5-yl]methyl}piperazin-1-yl)acetic acid, 10E5 Fab heavy chain, 10E5 light chain, ...
著者Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
登録日2022-03-11
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.25492167 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UJK
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BU of 7ujk by Molmil
Integrin alpha IIB beta3 complex with lamifiban
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-30
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.43265581 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UKO
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BU of 7uko by Molmil
Integrin alpha IIB beta3 complex with sibrafiban (Mn)
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-04-01
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UDG
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BU of 7udg by Molmil
Integrin alpha IIB beta3 complex with lotrafiban
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-19
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.800069 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UE0
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BU of 7ue0 by Molmil
Integrin alpha IIB beta3 complex with fradafiban
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-20
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.741962 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UKP
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BU of 7ukp by Molmil
Integrin alpha IIB beta3 complex with a gantofiban analog
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-04-01
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.80112982 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7U9F
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BU of 7u9f by Molmil
Integrin alpha IIB beta3 complex with BMS compound 4 in Mn2+
分子名称: (4-{[(5S)-3-{4-[(E)-imino(4-methylpiperazin-1-yl)methyl]phenyl}-4,5-dihydro-1,2-oxazol-5-yl]methyl}piperazin-1-yl)acetic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-10
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.70000529 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UBR
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BU of 7ubr by Molmil
Integrin alpha IIB beta3 complex with GR144053
分子名称: 10E5 Fab heavy chain, 10E5 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-15
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.04992747 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7UJE
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BU of 7uje by Molmil
Integrin alpha IIB beta3 complex with UR2922 in Mn2+
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
登録日2022-03-30
公開日2022-08-17
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.499968 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
2XWC
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BU of 2xwc by Molmil
Crystal structure of the DNA binding domain of human TP73 refined at 1.8 A resolution
分子名称: GLYCEROL, TRIS(HYDROXYETHYL)AMINOMETHANE, TUMOUR PROTEIN P73, ...
著者Canning, P, Zhang, Y, Vollmar, M, Krojer, T, Ugochukwu, E, Muniz, J.R.C, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
登録日2010-11-03
公開日2010-11-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural Basis for Aspp2 Recognition by the Tumor Suppressor P73.
J.Mol.Biol., 423, 2012
7W3Y
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BU of 7w3y by Molmil
CryoEM structure of human Kv4.3
分子名称: Isoform 2 of Potassium voltage-gated channel subfamily D member 3
著者Ma, D.M, Guo, J.T.
登録日2021-11-26
公開日2022-11-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
7W6S
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BU of 7w6s by Molmil
CryoEM structure of human KChIP2-Kv4.3 complex
分子名称: Isoform 2 of Potassium voltage-gated channel subfamily D member 3, Kv channel-interacting protein 2
著者Ma, D.M, Guo, J.T.
登録日2021-12-02
公開日2022-11-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
7W6N
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BU of 7w6n by Molmil
CryoEM structure of human KChIP1-Kv4.3 complex
分子名称: Isoform 2 of Potassium voltage-gated channel subfamily D member 3, Kv channel-interacting protein 1
著者Ma, D.M, Guo, J.T.
登録日2021-12-02
公開日2022-11-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
7W6T
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BU of 7w6t by Molmil
CryoEM structure of human KChIP1-Kv4.3-DPP6 complex
分子名称: Dipeptidyl aminopeptidase-like protein 6, Isoform 2 of Potassium voltage-gated channel subfamily D member 3, Kv channel-interacting protein 1
著者Ma, D.M, Guo, J.T.
登録日2021-12-02
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
6JW5
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BU of 6jw5 by Molmil
RVD Q* recognizes 5hmC through water-mediated H bonds
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW0
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BU of 6jw0 by Molmil
Universal RVD R* accommodates cytosine via water-mediated interactions
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*CP*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW3
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BU of 6jw3 by Molmil
Degenerate RVD RG forms a distinct loop conformation
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
7W8S
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Structure of SARS-CoV-2 spike receptor-binding domain Y453F mutation complexed with American mink ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
著者Su, C, Qi, J.X, Gao, G.F.
登録日2021-12-08
公開日2022-08-17
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Molecular Basis of Mink ACE2 Binding to SARS-CoV-2 and Its Mink-Derived Variants.
J.Virol., 96, 2022

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件を2024-10-09に公開中

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