Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6YRJ
DownloadVisualize
BU of 6yrj by Molmil
SFX structure of dye-type peroxidase DtpB in the ferric state
分子名称: MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Putative iron-dependent peroxidase
著者Lucic, M, Axford, D.A, Owen, R.L, Worrall, J.A.R, Hough, M.A.
登録日2020-04-20
公開日2021-01-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in Fe IV =O Formation.
Angew.Chem.Int.Ed.Engl., 59, 2020
1BZJ
DownloadVisualize
BU of 1bzj by Molmil
Human ptp1b complexed with tpicooh
分子名称: 6-(DIFLUORO-PHOSPHONO-METHYL)-NAPHTHALENE-2-CARBOXYLIC ACID, PROTEIN (PROTEIN-TYROSINE-PHOSPHATASE)
著者Groves, M.R, Yao, Z.-J, Barford Jr, D.T.B.
登録日1998-10-29
公開日1999-02-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for inhibition of the protein tyrosine phosphatase 1B by phosphotyrosine peptide mimetics.
Biochemistry, 37, 1998
5GPB
DownloadVisualize
BU of 5gpb by Molmil
COMPARISON OF THE BINDING OF GLUCOSE AND GLUCOSE-1-PHOSPHATE DERIVATIVES TO T-STATE GLYCOGEN PHOSPHORYLASE B
分子名称: (1S)-1,5-anhydro-1-(phosphonomethyl)-D-glucitol, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE, ...
著者Martin, J.L, Johnson, L.N.
登録日1990-06-04
公開日1992-10-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b.
Biochemistry, 29, 1990
1PTY
DownloadVisualize
BU of 1pty by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH TWO PHOSPHOTYROSINE MOLECULES
分子名称: MAGNESIUM ION, O-PHOSPHOTYROSINE, PROTEIN TYROSINE PHOSPHATASE 1B
著者Zhao, Y, Puius, Y.A, Sullivan, M, Lawrence, D, Almo, S.C, Zhang, Z.-Y.
登録日1997-01-16
公開日1998-01-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Identification of a second aryl phosphate-binding site in protein-tyrosine phosphatase 1B: a paradigm for inhibitor design.
Proc.Natl.Acad.Sci.USA, 94, 1997
6YRC
DownloadVisualize
BU of 6yrc by Molmil
Spectroscopically-validated structure of DtpB from Streptomyces lividans in the ferric state
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, GLYCEROL, MAGNESIUM ION, ...
著者Lucic, M, Dworkowski, F.S.N, Worrall, J.A.R, Hough, M.A.
登録日2020-04-20
公開日2021-01-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in Fe IV =O Formation.
Angew.Chem.Int.Ed.Engl., 59, 2020
6YR4
DownloadVisualize
BU of 6yr4 by Molmil
Dye-type peroxidase DtpB in the ferryl state: Spectroscopically Validated composite structure
分子名称: MAGNESIUM ION, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lucic, M, Dworkowski, F.S.N, Worrall, J.A.R, Hough, M.A.
登録日2020-04-19
公開日2021-01-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in Fe IV =O Formation.
Angew.Chem.Int.Ed.Engl., 59, 2020
3GPB
DownloadVisualize
BU of 3gpb by Molmil
COMPARISON OF THE BINDING OF GLUCOSE AND GLUCOSE-1-PHOSPHATE DERIVATIVES TO T-STATE GLYCOGEN PHOSPHORYLASE B
分子名称: 1-O-phosphono-alpha-D-glucopyranose, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE
著者Martin, J.L, Johnson, L.N.
登録日1990-06-04
公開日1992-10-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b.
Biochemistry, 29, 1990
1HB7
DownloadVisualize
BU of 1hb7 by Molmil
quasi-atomic resolution model of bacteriophage PRD1 sus1 mutant, obtained by combined cryo-EM and X-ray crystallography.
分子名称: BACTERIOPHAGE PRD1 SUS1 MUTANT CAPSID
著者San Martin, C, Burnett, R.M, De Haas, F, Heinkel, R, Rutten, T, Fuller, S.D, Butcher, S.J, Bamford, D.H.
登録日2001-04-12
公開日2001-12-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Combined Em/X-Ray Imaging Yields a Quasi-Atomic Model of the Adenovirus-Related Bacteriophage Prd1 and Shows Key Capsid and Membrane Interactions.
Structure, 9, 2001
1HB9
DownloadVisualize
BU of 1hb9 by Molmil
quasi-atomic resolution model of bacteriophage PRD1 wild type virion, obtained by combined cryo-EM and X-ray crystallography.
分子名称: BACTERIOPHAGE PRD1
著者San Martin, C, Burnett, R.M, De Haas, F, Heinkel, R, Rutten, T, Fuller, S.D, Butcher, S.J, Bamford, D.H.
登録日2001-04-13
公開日2001-12-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献Combined Em/X-Ray Imaging Yields a Quasi-Atomic Model of the Adenovirus-Related Bacteriophage Prd1 and Shows Key Capsid and Membrane Interactions
Structure, 9, 2001
8Q3L
DownloadVisualize
BU of 8q3l by Molmil
Human Gamma-D Crystallin R36S fresh serial crystallographic structure
分子名称: Gamma-crystallin D
著者Yorke, B.A, Hill, J.A.
登録日2023-08-04
公開日2024-04-17
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An ultraviolet-driven rescue pathway for oxidative stress to eye lens protein human gamma-D crystallin.
Commun Chem, 7, 2024
6VN2
DownloadVisualize
BU of 6vn2 by Molmil
USP7 IN COMPLEX WITH LIGAND COMPOUND 18
分子名称: 1-({7-[(2R)-5-chloro-2-(piperazine-1-carbonyl)-2,3-dihydro-1-benzofuran-7-yl]thieno[3,2-b]pyridin-2-yl}methyl)-1H-pyrrole-2,5-dione, ACETATE ION, Ubiquitin carboxyl-terminal hydrolase 7
著者Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
登録日2020-01-29
公開日2020-04-29
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
6VN3
DownloadVisualize
BU of 6vn3 by Molmil
USP7 IN COMPLEX WITH LIGAND COMPOUND 23
分子名称: 1-{[7-(5-chloro-2-{[(3R,4S)-4-fluoropyrrolidin-3-yl]oxy}-3-methylphenyl)thieno[3,2-b]pyridin-2-yl]methyl}-1H-pyrrole-2,5-dione, Ubiquitin carboxyl-terminal hydrolase 7
著者Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
登録日2020-01-29
公開日2020-04-29
最終更新日2020-06-17
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
6VN6
DownloadVisualize
BU of 6vn6 by Molmil
USP7 IN COMPLEX WITH LIGAND COMPOUND 14
分子名称: Ubiquitin carboxyl-terminal hydrolase 7, ZINC ION, [(2R)-5-chloro-7-{2-[(2S)-1-chloro-2,3-dihydroxypropan-2-yl]thieno[3,2-b]pyridin-7-yl}-2,3-dihydro-1-benzofuran-2-yl](piperazin-1-yl)methanone
著者Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
登録日2020-01-29
公開日2020-04-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
6VN5
DownloadVisualize
BU of 6vn5 by Molmil
USP7 IN COMPLEX WITH LIGAND COMPOUND 7
分子名称: Ubiquitin carboxyl-terminal hydrolase 7, [(2R)-7-(2-aminopyridin-4-yl)-5-chloro-2,3-dihydro-1-benzofuran-2-yl](piperazin-1-yl)methanone
著者Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
登録日2020-01-29
公開日2020-04-29
最終更新日2020-06-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
6VN4
DownloadVisualize
BU of 6vn4 by Molmil
USP7 IN COMPLEX WITH LIGAND COMPOUND 1
分子名称: 3-({4-hydroxy-1-[(2R)-2-methyl-3-phenylpropanoyl]piperidin-4-yl}methyl)quinazolin-4(3H)-one, Ubiquitin carboxyl-terminal hydrolase 7
著者Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
登録日2020-01-29
公開日2020-04-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
4GPB
DownloadVisualize
BU of 4gpb by Molmil
COMPARISON OF THE BINDING OF GLUCOSE AND GLUCOSE-1-PHOSPHATE DERIVATIVES TO T-STATE GLYCOGEN PHOSPHORYLASE B
分子名称: 2-deoxy-2-fluoro-1-O-phosphono-alpha-D-glucopyranose, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE
著者Martin, J.L, Johnson, L.N.
登録日1990-06-04
公開日1992-10-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b.
Biochemistry, 29, 1990
5O8N
DownloadVisualize
BU of 5o8n by Molmil
Structure of thermolysin at room temperature via a method of acoustically induced rotation.
分子名称: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
著者Axford, D.N, Burton, C, Docker, P, Prince, M, Topham, P.D.
登録日2017-06-13
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An acoustic on-chip goniometer for room temperature macromolecular crystallography.
Lab Chip, 17, 2017
1GPY
DownloadVisualize
BU of 1gpy by Molmil
CRYSTALLOGRAPHIC BINDING STUDIES ON THE ALLOSTERIC INHIBITOR GLUCOSE-6-PHOSPHATE TO T STATE GLYCOGEN PHOSPHORYLASE B
分子名称: 6-O-phosphono-alpha-D-glucopyranose, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE
著者Johnson, L.N.
登録日1993-03-31
公開日1993-10-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic binding studies on the allosteric inhibitor glucose-6-phosphate to T state glycogen phosphorylase b.
J.Mol.Biol., 232, 1993
8QPH
DownloadVisualize
BU of 8qph by Molmil
Crystal structure of Lymantria dispar CPV14 polyhedra 14 crystals
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Polyhedrin
著者Trincao, J, Warren, A, Crawshaw, A, Sutton, G, Stuart, D, Evans, G.
登録日2023-10-02
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献VMXm - sub-micron microfocus beamline for macromolecular crystallography at Diamond Light Source
To Be Published
8QQC
DownloadVisualize
BU of 8qqc by Molmil
Crystal structure of Lymantria dispar CPV14 polyhedra single crystal
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Polyhedrin
著者Trincao, J, Warren, A, Crawshaw, A, Sutton, G, Stuart, D, Evans, G.
登録日2023-10-04
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献VMXm - sub-micron microfocus beamline for macromolecular crystallography at Diamond Light Source
To Be Published
7A43
DownloadVisualize
BU of 7a43 by Molmil
Fluoroacetate Dehalogenase measured by serial femtosecond crystallography
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase
著者Mehrabi, P, Schulz, E.C, Buecker, R.
登録日2020-08-19
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
7A45
DownloadVisualize
BU of 7a45 by Molmil
CO-bound sperm whale myoglobin measured by serial femtosecond crystallography
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Mehrabi, P, Schulz, E.C, Buecker, R.
登録日2020-08-19
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
7A42
DownloadVisualize
BU of 7a42 by Molmil
Fluoroacetate Dehalogenase measured by serial synchrotron crystallography
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase
著者Mehrabi, P, Schulz, E.C, Buecker, R.
登録日2020-08-19
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
7A44
DownloadVisualize
BU of 7a44 by Molmil
CO-bound sperm whale myoglobin measured by serial synchrotron crystallography
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Mehrabi, P, Schulz, E.C, Buecker, R.
登録日2020-08-19
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.
Sci Adv, 7, 2021
8BD0
DownloadVisualize
BU of 8bd0 by Molmil
Human Gamma-D crystallin R36S mutant with DTT-Cystein Protein modification
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Human Gamma-D Crystallin R36S
著者Yorke, B.A, Hill, J.A.
登録日2022-10-17
公開日2023-11-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An ultraviolet-driven rescue pathway for oxidative stress to eye lens protein human gamma-D crystallin.
Commun Chem, 7, 2024

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon