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2E7A
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BU of 2e7a by Molmil
TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity
分子名称: Tumor necrosis factor
著者Mukai, Y, Yamagata, Y, Tsutsumi, Y.
登録日2007-01-09
公開日2007-11-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Creation and X-ray structure analysis of the tumor necrosis factor receptor-1-selective mutant of a tumor necrosis factor-alpha antagonist
J.Biol.Chem., 283, 2008
5AZF
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BU of 5azf by Molmil
Crystal structure of LGG-1 complexed with a WEEL peptide
分子名称: CADMIUM ION, Protein lgg-1, SULFATE ION, ...
著者Watanabe, Y, Noda, N.N.
登録日2015-10-05
公開日2015-12-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis of the Differential Function of the Two C. elegans Atg8 Homologs, LGG-1 and LGG-2, in Autophagy.
Mol.Cell, 60, 2015
7U9O
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BU of 7u9o by Molmil
SARS-CoV-2 spike trimer RBD in complex with Fab NE12
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NE12 Fab heavy chain, NE12 Fab light chain, ...
著者Tsybovsky, Y, Kwong, P.D, Farci, P.
登録日2022-03-11
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Potent monoclonal antibodies neutralize Omicron sublineages and other SARS-CoV-2 variants.
Cell Rep, 41, 2022
7U9P
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BU of 7u9p by Molmil
SARS-CoV-2 spike trimer RBD in complex with Fab NA8
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NA8 Fab heavy chain, NA8 Fab light chain, ...
著者Tsybovsky, Y, Kwong, P.D, Farci, P.
登録日2022-03-11
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Potent monoclonal antibodies neutralize Omicron sublineages and other SARS-CoV-2 variants.
Cell Rep, 41, 2022
2Z0D
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BU of 2z0d by Molmil
The crystal structure of human Atg4B- LC3(1-120) complex
分子名称: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
著者Satoo, K, Noda, N.N, Inagaki, F.
登録日2007-05-07
公開日2007-05-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
2Z0E
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BU of 2z0e by Molmil
The crystal structure of human Atg4B- LC3(1-124) complex
分子名称: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
著者Satoo, K, Noda, N.N, Inagaki, F.
登録日2007-05-07
公開日2007-05-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
6E3H
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BU of 6e3h by Molmil
Crystal structure of S9-3-37 bound to H5 influenza hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Wu, N.C, Wilson, I.A.
登録日2018-07-14
公開日2018-09-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The D3-9 gene segment encodes for recurring and adaptable binding motifs in broadly neutralizing antibodies to influenza virus
Cell Host Microbe, 2018
7N6P
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BU of 7n6p by Molmil
Crystal structure of the anti-EBOV and SUDV monoclonal antibody 1C3 Fab
分子名称: 1C3 Fab heavy chain, 1C3 Fab light chain
著者Milligan, J.C, Yu, X, Buck, T, Saphire, E.O.
登録日2021-06-08
公開日2022-04-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Asymmetric and non-stoichiometric glycoprotein recognition by two distinct antibodies results in broad protection against ebolaviruses.
Cell, 185, 2022
2ZPN
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BU of 2zpn by Molmil
The crystal structure of Saccharomyces cerevisiae Atg8- Atg19(412-415) complex
分子名称: Autophagy-related protein 8, SULFATE ION, Saccharomyces cerevisiae Atg19(412-415)
著者Noda, N.N, Inagaki, F.
登録日2008-07-17
公開日2008-12-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of target recognition by Atg8/LC3 during selective autophagy
Genes Cells, 13, 2008
6MWR
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BU of 6mwr by Molmil
Recognition of MHC-like molecule
分子名称: 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
著者Le Nours, J, Rossjohn, J.
登録日2018-10-30
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A class of gamma delta T cell receptors recognize the underside of the antigen-presenting molecule MR1.
Science, 366, 2019
5B3N
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BU of 5b3n by Molmil
The crystal structure of anti-H4K20me1_scFv, 15F11
分子名称: anti-H4K20me1_scFv
著者Kujirai, T, Horikoshi, N, Kurumizaka, H.
登録日2016-03-04
公開日2016-09-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献A Genetically Encoded Probe for Live-Cell Imaging of H4K20 Monomethylation
J.Mol.Biol., 428, 2016
2E5A
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BU of 2e5a by Molmil
Crystal Structure of Bovine Lipoyltransferase in Complex with Lipoyl-AMP
分子名称: 5'-O-[(R)-({5-[(3R)-1,2-DITHIOLAN-3-YL]PENTANOYL}OXY)(HYDROXY)PHOSPHORYL]ADENOSINE, ACETIC ACID, Lipoyltransferase 1, ...
著者Fujiwara, K, Hosaka, H, Matsuda, M, Suzuki, M, Nakagawa, A.
登録日2006-12-19
公開日2007-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of bovine Lipoyltransferase in complex with lipoyl-AMP
J.Mol.Biol., 371, 2007
5YEC
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BU of 5yec by Molmil
Crystal structure of Atg7CTD-Atg8-MgATP complex in form II
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Autophagy-related protein 8, MAGNESIUM ION, ...
著者Yamaguchi, M, Satoo, K, Noda, N.N.
登録日2017-09-16
公開日2018-03-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.147 Å)
主引用文献Atg7 Activates an Autophagy-Essential Ubiquitin-like Protein Atg8 through Multi-Step Recognition.
J. Mol. Biol., 430, 2018
2CZU
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BU of 2czu by Molmil
lipocalin-type prostaglandin D synthase
分子名称: Prostaglandin-H2 D-isomerase
著者Kumasaka, T, Irikura, D, Ago, H, Aritake, K, Yamamoto, M, Inoue, T, Miyano, M, Urade, Y, Hayaishi, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-17
公開日2006-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.
J.Biol.Chem., 284, 2009
2CZT
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BU of 2czt by Molmil
lipocalin-type prostaglandin D synthase
分子名称: Prostaglandin-H2 D-isomerase
著者Kumasaka, T, Irikura, D, Ago, H, Aritake, K, Yamamoto, M, Inoue, T, Miyano, M, Urade, Y, Hayaishi, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-17
公開日2006-10-03
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.
J.Biol.Chem., 284, 2009
1WU1
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BU of 1wu1 by Molmil
Factor Xa in complex with the inhibitor 4-[(5-chloroindol-2-yl)sulfonyl]-2-(2-methylpropyl)-1-[[5-(pyridin-4-yl) pyrimidin-2-yl]carbonyl]piperazine
分子名称: 5-CHLORO-2-({3-ISOBUTYL-4-[(5-PYRIDIN-4-YLPYRIMIDIN-2-YL)CARBONYL]PIPERAZIN-1-YL}SULFONYL)-1H-INDOLE, CALCIUM ION, Coagulation factor X, ...
著者Suzuki, M.
登録日2004-11-29
公開日2005-11-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design, synthesis, and biological activity of non-basic compounds as factor Xa inhibitors: SAR study of S1 and aryl binding sites
Bioorg.Med.Chem., 13, 2005
3M4D
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BU of 3m4d by Molmil
Crystal structure of the M113N mutant of alpha-hemolysin
分子名称: Alpha-hemolysin
著者Montoya, M, Gouaux, E.
登録日2010-03-10
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular bases of cyclodextrin adapter interactions with engineered protein nanopores.
Proc.Natl.Acad.Sci.USA, 107, 2010
3M3R
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BU of 3m3r by Molmil
Crystal structure of the M113F alpha-hemolysin mutant complexed with beta-cyclodextrin
分子名称: Alpha-hemolysin, Cycloheptakis-(1-4)-(alpha-D-glucopyranose)
著者Montoya, M, Gouaux, E.
登録日2010-03-09
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular bases of cyclodextrin adapter interactions with engineered protein nanopores.
Proc.Natl.Acad.Sci.USA, 107, 2010
2ZZP
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BU of 2zzp by Molmil
The crystal structure of human Atg4B(C74S)- LC3(1-124) complex
分子名称: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
著者Satoo, K, Noda, N.N, Inagaki, F.
登録日2009-02-22
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
3M2L
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BU of 3m2l by Molmil
Crystal structure of the M113F mutant of alpha-hemolysin
分子名称: Alpha-hemolysin
著者Montoya, M, Gouaux, E.
登録日2010-03-07
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular bases of cyclodextrin adapter interactions with engineered protein nanopores.
Proc.Natl.Acad.Sci.USA, 107, 2010
4MBU
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BU of 4mbu by Molmil
Crystal structure of N-acetyltransferase from Staphylococcus aureus Mu50
分子名称: CADMIUM ION, PHOSPHATE ION, Similar to N-acetyltransferase
著者Srivastava, P, Khandokar, Y, Forwood, J.K.
登録日2013-08-19
公開日2014-09-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural characterization of a Gcn5-related N-acetyltransferase from Staphylococcus aureus.
Plos One, 9, 2014
3M4E
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BU of 3m4e by Molmil
Crystal structure of the M113N mutant of alpha-hemolysin bound to beta-cyclodextrin
分子名称: Alpha-hemolysin, Cycloheptakis-(1-4)-(alpha-D-glucopyranose)
著者Montoya, M, Gouaux, E.
登録日2010-03-10
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular bases of cyclodextrin adapter interactions with engineered protein nanopores.
Proc.Natl.Acad.Sci.USA, 107, 2010
3VIR
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BU of 3vir by Molmil
Crystal strcture of Swi5 from fission yeast
分子名称: Mating-type switching protein swi5, octyl beta-D-glucopyranoside
著者Kuwabara, N, Yamada, N, Hashimoto, H, Sato, M, Iwasaki, H, Shimizu, T.
登録日2011-10-06
公開日2012-08-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex
Structure, 20, 2012
6A97
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BU of 6a97 by Molmil
Crystal structure of MHC-like MILL2
分子名称: Beta-2-microglobulin, MHC I-like leukocyte 2 long form, SULFATE ION
著者Kajikawa, M, Ose, T, Maenaka, K.
登録日2018-07-11
公開日2018-12-05
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Structure of MHC class I-like MILL2 reveals heparan-sulfate binding and interdomain flexibility.
Nat Commun, 9, 2018
5J36
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BU of 5j36 by Molmil
Crystal structure of 60-mer BFDV Capsid Protein
分子名称: Beak and feather disease virus capsid protein, PHOSPHATE ION
著者Sarker, S, Raidal, S, Aragao, D, Forwood, J.K.
登録日2016-03-30
公開日2016-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016

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