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1B5Q
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A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, N,N'-BIS(2,3-BUTADIENYL)-1,4-BUTANE-DIAMINE, ...
著者Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
登録日1999-01-07
公開日2000-01-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999
1B3P
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BU of 1b3p by Molmil
5'-D(*GP*GP*AP*GP*GP*AP*T)-3'
分子名称: DNA (5'-D(*GP*GP*AP*GP*GP*AP*T)-3')
著者Kettani, A, Bouaziz, S, Skripkin, E, Majumdar, A, Wang, W, Jones, R.A, Patel, D.J.
登録日1998-12-14
公開日1999-08-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Interlocked mismatch-aligned arrowhead DNA motifs.
Structure Fold.Des., 7, 1999
1B3Y
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BU of 1b3y by Molmil
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTETRAOSE
分子名称: PROTEIN (XYLANASE), alpha-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
著者Schmidt, A, Kratky, C.
登録日1998-12-15
公開日1999-04-06
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.
Biochemistry, 38, 1999
8D30
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BU of 8d30 by Molmil
Crystal structure of the human COPB2 WD-domains
分子名称: 1,2-ETHANEDIOL, Coatomer subunit beta'
著者Zeng, H, Dong, A, Hutchinson, A, Seitova, A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2022-05-31
公開日2022-11-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the human COPB2 WD-domains
To Be Published
8JHU
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BU of 8jhu by Molmil
Legionella effector protein SidI
分子名称: Legionella pneumophila effector protein SidI
著者Wang, L, Subramanian, A, Mukherjee, S, Walter, P.
登録日2023-05-25
公開日2023-08-30
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A Legionella toxin exhibits tRNA mimicry and glycosyl transferase activity to target the translation machinery and trigger a ribotoxic stress response.
Nat.Cell Biol., 25, 2023
1B30
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XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE)
分子名称: PROTEIN (XYLANASE), beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
著者Schmidt, A, Kratky, C.
登録日1998-12-15
公開日1999-03-31
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.
Biochemistry, 38, 1999
8FDB
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BU of 8fdb by Molmil
CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM Shewanella denitrificans OS217 IN COMPLEX WITH GLUCITOLAMINE-6-PHOSPHATE AT 3.06 A RESOLUTION.
分子名称: 2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE, GLYCEROL, Glutamine-fructose-6-phosphate transaminase (Isomerizing), ...
著者Rodriguez-Romero, A, Rodriguez-Hernandez, A, Marcos-Viquez, J, Bustos-Jaimes, I.
登録日2022-12-02
公開日2023-05-17
最終更新日2023-06-07
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Substrate binding in the allosteric site mimics homotropic cooperativity in the SIS-fold glucosamine-6-phosphate deaminases.
Protein Sci., 32, 2023
7WN2
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BU of 7wn2 by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG53 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-17
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
7WNB
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BU of 7wnb by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab Light chain, ...
著者Yamamoto, A, Higashiura, A.
登録日2022-01-18
公開日2023-04-19
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural basis of spike RBM-specific human antibodies counteracting broad SARS-CoV-2 variants.
Commun Biol, 6, 2023
6WPC
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BU of 6wpc by Molmil
Crystal structure of Bacillus thuringiensis Cry1A.2 tryptic core variant
分子名称: Cry1A.2
著者Rydel, T.J, Evdokimov, A.
登録日2020-04-27
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Bacillus thuringiensis chimeric proteins Cry1A.2 and Cry1B.2 to control soybean lepidopteran pests: New domain combinations enhance insecticidal spectrum of activity and novel receptor contributions.
Plos One, 16, 2021
1B3W
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BU of 1b3w by Molmil
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE
分子名称: PROTEIN (XYLANASE), alpha-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose
著者Schmidt, A, Kratky, C.
登録日1998-12-15
公開日1999-04-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.
Biochemistry, 38, 1999
4WRT
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BU of 4wrt by Molmil
Crystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2)
分子名称: Influenza virus polymerase vRNA promoter 3' end, Influenza virus polymerase vRNA promoter 5' end, PA, ...
著者Reich, S, Guilligay, D, Pflug, A, Cusack, S.
登録日2014-10-25
公開日2014-11-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insight into cap-snatching and RNA synthesis by influenza polymerase.
Nature, 516, 2014
9G2R
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BU of 9g2r by Molmil
Endophilin B1 dimers bound to nanodiscs
分子名称: Endophilin-B1
著者Thorlacius, A, Sundborger-Lunna, A.
登録日2024-07-11
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Endophilin B1 dimers bound to nanodiscs
To Be Published
8WDV
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BU of 8wdv by Molmil
Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
著者Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
登録日2023-09-16
公開日2024-02-21
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.24 Å)
主引用文献High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
9G2W
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BU of 9g2w by Molmil
Endophilin B1 dimer bound to nanodisc edge
分子名称: Endophilin-B1
著者Thorlacius, A, Sundborger-Lunna, A.
登録日2024-07-11
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Endophilin B1 dimer bound to nanodisc edge
To Be Published
9C1Q
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BU of 9c1q by Molmil
Crystal structure of the WDR domain of human DCAF1 in complex with OICR-39512 compound
分子名称: (4P)-N-[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]-4-(4-chloro-2-fluorophenyl)-5-(3-methoxyprop-1-yn-1-yl)-1H-pyrrole-3-carboxamide, CHLORIDE ION, DDB1- and CUL4-associated factor 1, ...
著者kimani, S, Dong, A, Li, Y, Seitova, A, Al-awar, R, Wilson, B, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
登録日2024-05-29
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the WDR domain of human DCAF1 in complex with OICR-39512 compound
To be published
9G2U
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BU of 9g2u by Molmil
Endophilin B1 dimer bound to nanodisc center
分子名称: Endophilin-B1
著者Thorlacius, A, Sundborger-Lunna, A.
登録日2024-07-11
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Endophilin B1 dimers bound to nanodiscs
To Be Published
4WMV
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BU of 4wmv by Molmil
STRUCTURE OF MBP-MCL1 BOUND TO ligand 4 AT 2.4A
分子名称: 3-chloro-6-fluoro-1-benzothiophene-2-carboxylic acid, CHLORIDE ION, MAGNESIUM ION, ...
著者Clifton, M.C, Moulin, A.
登録日2014-10-09
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Maltose-Binding Protein Fusion Construct Yields a Robust Crystallography Platform for MCL1.
Plos One, 10, 2015
1B31
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BU of 1b31 by Molmil
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT
分子名称: PROTEIN (XYLANASE)
著者Schmidt, A, Kratky, C.
登録日1998-12-15
公開日1999-04-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.
Biochemistry, 38, 1999
4V6I
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BU of 4v6i by Molmil
Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome
分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein RACK1 (RACK1), ...
著者Armache, J.-P, Jarasch, A, Anger, A.M, Villa, E, Becker, T, Bhushan, S, Jossinet, F, Habeck, M, Dindar, G, Franckenberg, S, Marquez, V, Mielke, T, Thomm, M, Berninghausen, O, Beatrix, B, Soeding, J, Westhof, E, Wilson, D.N, Beckmann, R.
登録日2010-10-12
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (8.8 Å)
主引用文献Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
1B3T
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BU of 1b3t by Molmil
EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
分子名称: DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*AP*TP*AP*TP*GP*CP*TP*TP*CP*CP*C)-3'), PROTEIN (NUCLEAR PROTEIN EBNA1)
著者Bochkarev, A, Bochkareva, E, Edwards, A, Frappier, L.
登録日1998-12-14
公開日1998-12-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The 2.2 A structure of a permanganate-sensitive DNA site bound by the Epstein-Barr virus origin binding protein, EBNA1.
J.Mol.Biol., 284, 1998
7P3R
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BU of 7p3r by Molmil
Helical structure of the toxin MakA from Vibrio cholera
分子名称: MakA tetramer
著者Berg, A, Nadeem, A, Uhlin, B.E, Wai, S.N, Barandun, J.
登録日2021-07-08
公開日2022-02-23
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae .
Elife, 11, 2022
1B37
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A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (POLYAMINE OXIDASE), ...
著者Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
登録日1998-12-17
公開日1999-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999
8D9E
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BU of 8d9e by Molmil
gRAMP-match PFS target
分子名称: RAMP superfamily protein, RNA (36-MER), RNA (5'-R(P*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*GP*UP*A)-3'), ...
著者Hu, C, Nam, K.H, Schuler, G, Ke, A.
登録日2022-06-09
公開日2023-06-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8DFY
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BU of 8dfy by Molmil
Crystal structure of Human BTN2A1 Ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Butyrophilin subfamily 2 member A1, ...
著者Fulford, T.S, Soliman, C, Castle, R.G, Rigau, M, Ruan, Z, Dolezal, O, Seneviratna, R, Brown, H.G, Hanssen, E, Hammet, A, Li, S, Redmond, S.J, Chung, A, Gorman, M.A, Parker, M.W, Patel, O, Peat, T.S, Newman, J, Behren, A, Gherardin, N.A, Godfrey, D.I, Uldrich, A.P.
登録日2022-06-22
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.552 Å)
主引用文献Vgamma9-Vdelta2 T cells recognize butyrophilin 2A1 and 3A1 heteromers
To Be Published

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件を2024-08-07に公開中

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