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5ORG
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BU of 5org by Molmil
Structure of the periplasmic binding protein (PBP) OccJ from A. tumefaciens B6 in complex with octopine.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Vigouroux, A, Morera, S.
Deposit date:2017-08-16
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
Sci Rep, 7, 2017
1KKL
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BU of 1kkl by Molmil
L.casei HprK/P in complex with B.subtilis HPr
Descriptor: CALCIUM ION, HprK protein, PHOSPHOCARRIER PROTEIN HPR
Authors:Fieulaine, S, Morera, S, Poncet, S, Galinier, A, Janin, J, Deutscher, J, Nessler, S.
Deposit date:2001-12-10
Release date:2002-08-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of a bifunctional protein kinase in complex with its protein substrate HPr.
Proc.Natl.Acad.Sci.USA, 99, 2002
1JB1
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BU of 1jb1 by Molmil
Lactobacillus casei HprK/P Bound to Phosphate
Descriptor: HPRK PROTEIN, PHOSPHATE ION
Authors:Fieulaine, S, Morera, S, Poncet, S, Monedero, V, Gueguen-Chaignon, V, Galinier, A, Janin, J, Deutscher, J, Nessler, S.
Deposit date:2001-06-01
Release date:2001-08-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of HPr kinase: a bacterial protein kinase with a P-loop nucleotide-binding domain.
EMBO J., 20, 2001
6YAP
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BU of 6yap by Molmil
Crystal structure of ZmCKO4a in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
Descriptor: 1,2-ETHANEDIOL, 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea, Cytokinin dehydrogenase 4, ...
Authors:Kopecny, D, Briozzo, P, Morera, S.
Deposit date:2020-03-12
Release date:2020-10-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
5OTA
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BU of 5ota by Molmil
Structure of the periplasmic binding protein (PBP) NocT from Agrobacterium tumefaciens C58 in complex with octopinic acid
Descriptor: (2~{S})-5-azanyl-2-[[(2~{R})-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]pentanoic acid, 1,2-ETHANEDIOL, Nopaline-binding periplasmic protein
Authors:Vigouroux, A, Morera, S.
Deposit date:2017-08-21
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
Sci Rep, 7, 2017
5OT8
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BU of 5ot8 by Molmil
Structure of the periplasmic binding protein (PBP) NocT-G97S mutant from A. tumefaciens C58 in complex with octopine.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Vigouroux, A, Morera, S.
Deposit date:2017-08-21
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
Sci Rep, 7, 2017
1KKM
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BU of 1kkm by Molmil
L.casei HprK/P in complex with B.subtilis P-Ser-HPr
Descriptor: CALCIUM ION, HprK protein, PHOSPHATE ION, ...
Authors:Fieulaine, S, Morera, S, Poncet, S, Galinier, A, Janin, J, Deutscher, J, Nessler, S.
Deposit date:2001-12-10
Release date:2002-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of a bifunctional protein kinase in complex with its protein substrate HPr.
Proc.Natl.Acad.Sci.USA, 99, 2002
5ORE
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BU of 5ore by Molmil
Structure of the periplasmic binding protein (PBP) OccJ from agrobacterium tumefaciens B6
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Octopine-binding periplasmic protein
Authors:Vigouroux, A, Morera, S.
Deposit date:2017-08-16
Release date:2017-12-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
Sci Rep, 7, 2017
5OT9
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BU of 5ot9 by Molmil
Structure of the periplasmic binding protein (PBP) NocT from A.tumefaciens C58 in complex with histopine.
Descriptor: 1,2-ETHANEDIOL, Histopine, Nopaline-binding periplasmic protein
Authors:Vigouroux, A, Morera, S.
Deposit date:2017-08-21
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
Sci Rep, 7, 2017
5OTC
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BU of 5otc by Molmil
Structure of the periplasmic binding protein (PBP) NocT from Agrobacterium tumefaciens C58 in complex with noroctopinic acid.
Descriptor: (2~{S})-5-azanyl-2-(2-hydroxy-2-oxoethylamino)pentanoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Vigouroux, A, Morera, S.
Deposit date:2017-08-21
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
Sci Rep, 7, 2017
1NDK
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BU of 1ndk by Molmil
X-RAY STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Janin, J, Dumas, C, Morera, S, Lascu, I, Veron, M.
Deposit date:1993-07-15
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structure of nucleoside diphosphate kinase.
EMBO J., 11, 1992
1NVK
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BU of 1nvk by Molmil
T4 phage BGT in complex with UDP and a Mn2+ ion at 1.8 A resolution
Descriptor: DNA beta-glucosyltransferase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Lariviere, L, Kurzeck, J, Gueguen-Chaignon, V, Rueger, W, Morera, S.
Deposit date:2003-02-04
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism
J.Mol.Biol., 330, 2003
1NZF
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BU of 1nzf by Molmil
T4 phage BGT-D100A mutant in complex with UDP-glucose: Form II
Descriptor: CHLORIDE ION, DNA beta-glycosyltransferase, GLYCEROL, ...
Authors:Lariviere, L, Morera, S.
Deposit date:2003-02-17
Release date:2003-09-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism.
J.Mol.Biol., 330, 2003
1NZD
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BU of 1nzd by Molmil
T4 phage BGT-D100A mutant in complex with UDP-glucose: Form I
Descriptor: CHLORIDE ION, DNA beta-glycosyltransferase, GLYCEROL, ...
Authors:Lariviere, L, Morera, S.
Deposit date:2003-02-17
Release date:2003-09-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism
J.Mol.Biol., 330, 2003
1MN9
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BU of 1mn9 by Molmil
NDP kinase mutant (H122G) complex with RTP
Descriptor: MAGNESIUM ION, NDP kinase, RIBAVIRIN TRIPHOSPHATE
Authors:Gallois-montbrun, S, Chen, Y, Dutartre, H, Morera, S, Guerreiro, C, Mulard, L, Schneider, B, Janin, J, Canard, B, Veron, M, Deville-bonne, D.
Deposit date:2002-09-05
Release date:2003-03-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Analysis of the Activation of Ribavirin Analogs by NDP Kinase: Comparison with Other Ribavirin Targets
MOL.PHARMACOL., 63, 2003
8CJ9
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BU of 8cj9 by Molmil
Crystal structure of maize CKO/CKX8 in complex with urea-derived inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]benzamide
Descriptor: 1,2-ETHANEDIOL, 2-[[3,5-bis(chloranyl)phenyl]carbamoylamino]benzamide, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kopecny, D, Briozzo, P, Morera, S.
Deposit date:2023-02-12
Release date:2024-02-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Cytokinin oxidase/dehydrogenase inhibitors: progress towards agricultural practice.
J.Exp.Bot., 75, 2024
8CK6
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BU of 8ck6 by Molmil
Crystal structure of maize CKO/CKX8 in complex with urea-derived inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]-4-methoxy-benzamide
Descriptor: 1,2-ETHANEDIOL, 2-[[3,5-bis(chloranyl)phenyl]carbamoylamino]-4-methoxy-benzamide, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kopecny, D, Briozzo, P, Morera, S.
Deposit date:2023-02-14
Release date:2024-02-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cytokinin oxidase/dehydrogenase inhibitors: progress towards agricultural practice.
J.Exp.Bot., 75, 2024
1IXY
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BU of 1ixy by Molmil
Ternary complex of T4 phage BGT with UDP and a 13 mer DNA duplex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*GP*TP*AP*TP*C)-3', 5'-D(*GP*AP*TP*AP*CP*TP*3DRP*AP*GP*AP*TP*AP*G)-3', ...
Authors:Lariviere, L, Morera, S.
Deposit date:2002-07-09
Release date:2002-12-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Base-flipping Mechanism for the T4 Phage beta-Glucosyltransferase and Identification of a Transition-state Analog
J.Mol.Biol., 324, 2002
1J39
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BU of 1j39 by Molmil
Crystal Structure of T4 phage BGT in complex with its UDP-glucose substrate
Descriptor: DNA beta-glucosyltransferase, GLYCEROL, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Lariviere, L, Morera, S.
Deposit date:2003-01-21
Release date:2003-08-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism.
J.Mol.Biol., 330, 2003
1LWX
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BU of 1lwx by Molmil
AZT DIPHOSPHATE BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Janin, J, Xu, Y.
Deposit date:1997-04-30
Release date:1997-08-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray analysis of azido-thymidine diphosphate binding to nucleoside diphosphate kinase.
Proc.Natl.Acad.Sci.USA, 94, 1997
1B99
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BU of 1b99 by Molmil
3'-FLUORO-URIDINE DIPHOSPHATE BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
Descriptor: 2',3'-DIDEOXY-3'-FLUORO-URIDIDINE-5'-DIPHOSPHATE, PROTEIN (NUCLEOSIDE DIPHOSPHATE KINASE), PYROPHOSPHATE 2-
Authors:Janin, J, Xu, Y.
Deposit date:1999-02-22
Release date:1999-06-28
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic mechanism of nucleoside diphosphate kinase investigated using nucleotide analogues, viscosity effects, and X-ray crystallography.
Biochemistry, 38, 1999
2MJF
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BU of 2mjf by Molmil
Solution structure of the complex between the yeast Rsa1 and Hit1 proteins
Descriptor: Protein HIT1, Ribosome assembly 1 protein
Authors:Quinternet, M, Roth, B, Back, R, Jacquemin, C, Manival, X.
Deposit date:2014-01-08
Release date:2014-09-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Protein Hit1, a novel box C/D snoRNP assembly factor, controls cellular concentration of the scaffolding protein Rsa1 by direct interaction.
Nucleic Acids Res., 42, 2014
1BUX
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BU of 1bux by Molmil
3'-PHOSPHORYLATED NUCLEOTIDES BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Xu, Y, Schneider, B, Deville-Bonne, D, Veron, M, Janin, J.
Deposit date:1998-09-07
Release date:1999-04-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:3'-Phosphorylated nucleotides are tight binding inhibitors of nucleoside diphosphate kinase activity.
J.Biol.Chem., 273, 1998
1B4S
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BU of 1b4s by Molmil
STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE H122G MUTANT
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE, ...
Authors:Meyer, P, Janin, J.
Deposit date:1998-12-28
Release date:1999-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Nucleophilic activation by positioning in phosphoryl transfer catalyzed by nucleoside diphosphate kinase.
Biochemistry, 38, 1999
2FEP
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BU of 2fep by Molmil
Structure of truncated CcpA in complex with P-Ser-HPr and Sulfate ions
Descriptor: Catabolite control protein A, Phosphocarrier protein HPr, SULFATE ION
Authors:Chaptal, V, Gueguen-Chaignon, V, Poncet, S, Lecampion, C, Meyer, P, Deutscher, J, Galinier, A, Nessler, S.
Deposit date:2005-12-16
Release date:2006-06-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural analysis of B. subtilis CcpA effector binding site.
Proteins, 64, 2006

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