Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3JRZ
DownloadVisualize
BU of 3jrz by Molmil
CcdBVfi-FormII-pH5.6
Descriptor: CcdB
Authors:De Jonge, N, Buts, L, Loris, R.
Deposit date:2009-09-09
Release date:2009-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and thermodynamic characterization of vibrio fischeri CCDB
J.Biol.Chem., 285, 2010
3JSC
DownloadVisualize
BU of 3jsc by Molmil
CcdBVfi-FormI-pH7.0
Descriptor: CcdB, SULFATE ION
Authors:De Jonge, N, Buts, L, Loris, R.
Deposit date:2009-09-10
Release date:2009-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and thermodynamic characterization of vibrio fischeri CCDB
J.Biol.Chem., 285, 2010
5MJE
DownloadVisualize
BU of 5mje by Molmil
Crystal structure of the HigB2 toxin in complex with Nb8
Descriptor: Cytotoxic translational repressor of toxin-antitoxin stability system, DI(HYDROXYETHYL)ETHER, Nanobody 8, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-11-30
Release date:2017-04-05
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JA8
DownloadVisualize
BU of 5ja8 by Molmil
Crystal structure of the HigB2 toxin in complex with Nb2
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-12
Release date:2017-04-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JAA
DownloadVisualize
BU of 5jaa by Molmil
Crystal structure of the HigBA2 toxin-antitoxin complex
Descriptor: Antitoxin igA-2, Toxin HigB-2
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-12
Release date:2017-04-05
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
7A4Y
DownloadVisualize
BU of 7a4y by Molmil
Crystal structure of the P5P6 coiled-coil in complex with nanobody Nb34.
Descriptor: 1,2-ETHANEDIOL, Coiled-coil P5 peptide, Coiled-coil P6 peptide, ...
Authors:Hadzi, S.
Deposit date:2020-08-20
Release date:2021-05-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.157 Å)
Cite:A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
Proc.Natl.Acad.Sci.USA, 118, 2021
7A4T
DownloadVisualize
BU of 7a4t by Molmil
Crystal structure of the GCN coiled-coil in complex with nanobody Nb39
Descriptor: 1,2-ETHANEDIOL, ACETYL GROUP, GCN4 isoform 1, ...
Authors:Hadzi, S.
Deposit date:2020-08-20
Release date:2021-05-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.124 Å)
Cite:A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
Proc.Natl.Acad.Sci.USA, 118, 2021
7A48
DownloadVisualize
BU of 7a48 by Molmil
Crystal structure of the APH coiled-coil in complex with Nb49
Descriptor: APH colied-coil, Nanobody 49
Authors:Hadzi, S.
Deposit date:2020-08-19
Release date:2021-05-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.547 Å)
Cite:A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
Proc.Natl.Acad.Sci.USA, 118, 2021
7A4D
DownloadVisualize
BU of 7a4d by Molmil
Crystal structure of the APH coiled-coil in complex with nanobodies Nb28 and Nb30
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, APH coiled-coil, ...
Authors:Hadzi, S.
Deposit date:2020-08-19
Release date:2021-05-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.694 Å)
Cite:A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
Proc.Natl.Acad.Sci.USA, 118, 2021
7A50
DownloadVisualize
BU of 7a50 by Molmil
Crystal structure of the APH coiled-coil in complex with nanobody Nb26
Descriptor: 1,2-ETHANEDIOL, Coiled-coil APH, Nanobody Nb26
Authors:Hadzi, S.
Deposit date:2020-08-20
Release date:2021-05-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
Proc.Natl.Acad.Sci.USA, 118, 2021
2KMT
DownloadVisualize
BU of 2kmt by Molmil
NMR solution structure of Vibrio fischeri CcdB
Descriptor: CcdB
Authors:Zangger, K.
Deposit date:2009-08-04
Release date:2009-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Thermodynamic Characterization of Vibrio fischeri CcdB.
J.Biol.Chem., 285, 2010
2ARX
DownloadVisualize
BU of 2arx by Molmil
Pterocarpus angolensis seed lectin in complex with the decasaccharide NA2F
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.-J, Lah, J, Versees, W, Wyns, L, Loris, R.
Deposit date:2005-08-22
Release date:2006-08-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
2ARB
DownloadVisualize
BU of 2arb by Molmil
Pterocarpus angolensis Lectin (PAL) In Complex With The GlcNAc(beta1-2)Man Disaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.-J, Versees, W, Lah, J, Beeckmans, S, Wyns, L, Loris, R.
Deposit date:2005-08-19
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
5CKF
DownloadVisualize
BU of 5ckf by Molmil
E. coli MazF E24A form I
Descriptor: Endoribonuclease MazF, SODIUM ION
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CKB
DownloadVisualize
BU of 5ckb by Molmil
E. coli MazF form II
Descriptor: Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CKE
DownloadVisualize
BU of 5cke by Molmil
E.coli MazF E24A form IIa
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Endoribonuclease MazF, SULFATE ION
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.311 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CKD
DownloadVisualize
BU of 5ckd by Molmil
E. coli MazF E24A form III
Descriptor: Endoribonuclease MazF, SODIUM ION
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CO7
DownloadVisualize
BU of 5co7 by Molmil
E. coli MazF form III
Descriptor: Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-19
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.489 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CK9
DownloadVisualize
BU of 5ck9 by Molmil
E. coli MazF form I
Descriptor: Endoribonuclease MazF, PENTAETHYLENE GLYCOL
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CKH
DownloadVisualize
BU of 5ckh by Molmil
E. coli MazF E24A form IIb
Descriptor: Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.449 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CQX
DownloadVisualize
BU of 5cqx by Molmil
E. coli MazF mutant E24A in complex with MazE residues 68-82 form I
Descriptor: Antitoxin MazE, Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CR2
DownloadVisualize
BU of 5cr2 by Molmil
E. coli MazF in complex with single strand DNA substrate analog
Descriptor: Endoribonuclease MazF, ssDNA substrate analog
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CQY
DownloadVisualize
BU of 5cqy by Molmil
E. coli MazF mutant E24A in complex with MazE residues 68-82 form II
Descriptor: Antitoxin MazE, Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.481 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CW7
DownloadVisualize
BU of 5cw7 by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
Descriptor: GLYCEROL, PAAA2, Plasmid stabilization protein ParE
Authors:Sterckx, Y.G.-J, Loris, R.
Deposit date:2015-07-27
Release date:2016-06-01
Method:X-RAY DIFFRACTION (2.827 Å)
Cite:A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
5CZE
DownloadVisualize
BU of 5cze by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
Descriptor: PaaA2, Plasmid stabilization protein ParE
Authors:Loris, R, Sterckx, Y.G.J.
Deposit date:2015-07-31
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.82 Å)
Cite:A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon