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4NBC
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BU of 4nbc by Molmil
Oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form1)
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.945 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBH
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BU of 4nbh by Molmil
Carbazole-bound Oxygenase with Gln282 replaced by Tyr and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBB
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BU of 4nbb by Molmil
Carbazole- and oxygen-bound oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBA
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BU of 4nba by Molmil
Carbazole-bound oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBE
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BU of 4nbe by Molmil
Fluorene-bound oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form2)
Descriptor: 9H-fluorene, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NB8
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BU of 4nb8 by Molmil
Oxygenase with Ile262 replaced by Leu and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
3GKQ
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BU of 3gkq by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Terminal oxygenase component of carbazole 1,9a-dioxygenase
Authors:Umeda, T, Nojiri, H.
Deposit date:2009-03-11
Release date:2010-03-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Specific interaction via putidaredoxin-type ferredoxin in carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
To be Published
3GCE
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BU of 3gce by Molmil
Ferredoxin of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of carbazole 1,9a-dioxygenase
Authors:Inoue, K, Nojiri, H.
Deposit date:2009-02-22
Release date:2009-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Specific Interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase.
J.Mol.Biol., 392, 2009
3GCF
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BU of 3gcf by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Descriptor: CHLORIDE ION, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Inoue, K, Nojiri, H.
Deposit date:2009-02-22
Release date:2009-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Specific Interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase.
J.Mol.Biol., 392, 2009
5B52
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BU of 5b52 by Molmil
Crystal structure of the N-terminal domain of H-NS family protein TurB
Descriptor: H-NS family protein MvaT
Authors:Suzuki-Minakuchi, C, Nojiri, H.
Deposit date:2016-04-21
Release date:2016-10-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural similarities and differences in H-NS family proteins revealed by the N-terminal structure of TurB in Pseudomonas putida KT2440
Febs Lett., 590, 2016
4NBF
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BU of 4nbf by Molmil
Oxygenase with Gln282 replaced by Asn and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBG
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BU of 4nbg by Molmil
Oxygenase with Gln282 replaced by Tyr and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
1WRQ
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BU of 1wrq by Molmil
Crystal Structure of HutP-Antitermination complex
Descriptor: 5'-R(*UP*UP*UP*AP*GP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ...
Authors:Kumarevel, T, Mizuno, H, Kumar, P.K.R.
Deposit date:2004-10-25
Release date:2005-08-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the HutP-antitermination complex
To be published
1WPT
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BU of 1wpt by Molmil
Crystal Structure of HutP, an RNA binding anti-termination protein
Descriptor: Hut operon positive regulatory protein
Authors:Kumarevel, T, Mizuno, H, Kumar, P.K.R.
Deposit date:2004-09-13
Release date:2005-08-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization of the metal ion binding site in the anti-terminator protein, HutP, of Bacillus subtilis
Nucleic Acids Res., 33, 2005
1WMQ
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BU of 1wmq by Molmil
Structure of the HutP antitermination complex bound to a single stranded region of hut mRNA
Descriptor: 5'-R(P*UP*UP*UP*AP*GP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ...
Authors:Kumarevel, T.S, Mizuno, H, Kumar, P.K.R.
Deposit date:2004-07-14
Release date:2005-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of HutP-mediated anti-termination and roles of the Mg2+ ion and L-histidine ligand.
Nature, 434, 2005
2DE7
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BU of 2de7 by Molmil
The substrate-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Nojiri, H.
Deposit date:2006-02-08
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electron Transfer Complex Formation between Oxygenase and Ferredoxin Components in Rieske Nonheme Iron Oxygenase System
Structure, 14, 2006
2DE5
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BU of 2de5 by Molmil
Crystal structure of the electron transfer complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ferredoxin component of carbazole, ...
Authors:Ashikawa, Y, Nojiri, H.
Deposit date:2006-02-08
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Electron Transfer Complex Formation between Oxygenase and Ferredoxin Components in Rieske Nonheme Iron Oxygenase System
Structure, 14, 2006
2DE6
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BU of 2de6 by Molmil
The reduced complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ferredoxin component of carbazole, ...
Authors:Ashikawa, Y, Nojiri, H.
Deposit date:2006-02-08
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Electron Transfer Complex Formation between Oxygenase and Ferredoxin Components in Rieske Nonheme Iron Oxygenase System
Structure, 14, 2006
5YOT
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BU of 5yot by Molmil
Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Matsuzawa, T, Watanabe, M, Nakamichi, Y, Yaoi, K.
Deposit date:2017-10-31
Release date:2018-11-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme.
J.Struct.Biol., 205, 2019
5YQS
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BU of 5yqs by Molmil
Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yaoi, K, Matsuzawa, T, Watanabe, M, Nakamichi, Y.
Deposit date:2017-11-07
Release date:2018-11-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme.
J.Struct.Biol., 205, 2019
3VMG
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BU of 3vmg by Molmil
Reduced carbazole-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Nojiri, H.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
3VMI
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BU of 3vmi by Molmil
Carbazole- and oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Nojiri, H.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
3VMH
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BU of 3vmh by Molmil
Oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of carbazole, ...
Authors:Ashikawa, Y, Nojiri, H.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
6M0Q
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BU of 6m0q by Molmil
Hydroxylamine oxidoreductase from Nitrosomonas europaea
Descriptor: Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, HEME C, ...
Authors:Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T.
Deposit date:2020-02-22
Release date:2021-03-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
6M0P
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BU of 6m0p by Molmil
Hydroxylamine oxidoreductase in complex with juglone
Descriptor: 5-hydroxynaphthalene-1,4-dione, Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, ...
Authors:Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T.
Deposit date:2020-02-22
Release date:2021-03-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023

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