Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4MJ1
DownloadVisualize
BU of 4mj1 by Molmil
unliganded BK Polyomavirus VP1 pentamer
Descriptor: CHLORIDE ION, GLYCEROL, VP1 capsid protein
Authors:Neu, U, Stroh, L.J, Stehle, T.
Deposit date:2013-09-03
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Structure-Guided Mutation in the Major Capsid Protein Retargets BK Polyomavirus.
Plos Pathog., 9, 2013
8P1X
DownloadVisualize
BU of 8p1x by Molmil
TarM(Se)_G117R-UDP-glucose
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Guo, Y, Stehle, T.
Deposit date:2023-05-13
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Invasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition.
Sci Adv, 9, 2023
8P20
DownloadVisualize
BU of 8p20 by Molmil
TarM(Se)_G117R-UDP-4RboP-glucose
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
Authors:Guo, Y, Stehle, T.
Deposit date:2023-05-14
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.848 Å)
Cite:Invasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition.
Sci Adv, 9, 2023
5C1J
DownloadVisualize
BU of 5c1j by Molmil
Crystal Structure of native (reduced) CorB
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CorB
Authors:Zocher, G, Vilstrup, J, Stehle, T.
Deposit date:2015-06-14
Release date:2016-06-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of head to head polyketide fusion by CorB.
Chem Sci, 6, 2015
5CPU
DownloadVisualize
BU of 5cpu by Molmil
Crystal structure of murine polyomavirus PTA strain VP1
Descriptor: GLYCEROL, VP1
Authors:Liaci, A.M, Buch, M.H.C, Neu, U, Stehle, T.
Deposit date:2015-07-21
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
Plos Pathog., 11, 2015
5CQ0
DownloadVisualize
BU of 5cq0 by Molmil
Crystal structure of murine polyomavirus RA strain VP1 in complex with the GD1a glycan
Descriptor: Capsid protein VP1, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Buch, M.H.C, Liaci, A.M, Neu, U, Stehle, T.
Deposit date:2015-07-21
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
Plos Pathog., 11, 2015
5CPY
DownloadVisualize
BU of 5cpy by Molmil
Crystal structure of murine polyomavirus PTA strain VP1 in complex with the GD1a glycan
Descriptor: GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, VP1
Authors:Liaci, A.M, Buch, M.H.C, Neu, U, Stehle, T.
Deposit date:2015-07-21
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
Plos Pathog., 11, 2015
5CPW
DownloadVisualize
BU of 5cpw by Molmil
Crystal structure of murine polyomavirus PTA strain VP1 in complex with the GT1a glycan
Descriptor: GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Liaci, A.M, Buch, M.H.C, Neu, U, Stehle, T.
Deposit date:2015-07-21
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
Plos Pathog., 11, 2015
5CPZ
DownloadVisualize
BU of 5cpz by Molmil
Crystal structure of murine polyomavirus RA strain VP1 in complex with the GT1a glycan
Descriptor: Capsid protein VP1, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Buch, M.H.C, Liaci, A.M, Neu, U, Stehle, T.
Deposit date:2015-07-21
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
Plos Pathog., 11, 2015
5CPX
DownloadVisualize
BU of 5cpx by Molmil
Crystal structure of murine polyomavirus PTA strain VP1 in complex with the DSLNT glycan
Descriptor: GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Buch, M.H.C, Liaci, A.M, Neu, U, Stehle, T.
Deposit date:2015-07-21
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity.
Plos Pathog., 11, 2015
4Q4V
DownloadVisualize
BU of 4q4v by Molmil
Crystal structure of Coxsackievirus A24v
Descriptor: Coxsackievirus capsid protein VP1, Coxsackievirus capsid protein VP2, Coxsackievirus capsid protein VP3, ...
Authors:Zocher, G, Stehle, T.
Deposit date:2014-04-15
Release date:2014-11-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A sialic Acid binding site in a human picornavirus.
Plos Pathog., 10, 2014
4Q4X
DownloadVisualize
BU of 4q4x by Molmil
Crystal structure of Coxsackievirus A24v soaked with 6'-Sialyllactose (6SL)
Descriptor: CALCIUM ION, CHLORIDE ION, Coxsackievirus capsid protein VP1, ...
Authors:Zocher, G, Stehle, T.
Deposit date:2014-04-15
Release date:2014-11-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A sialic Acid binding site in a human picornavirus.
Plos Pathog., 10, 2014
4Q4Y
DownloadVisualize
BU of 4q4y by Molmil
Crystal structure of Coxsackievirus A24v soaked with Disialyllacto-N-tetraose (DSLNT)
Descriptor: CALCIUM ION, CHLORIDE ION, Coxsackievirus capsid protein VP1, ...
Authors:Zocher, G, Stehle, T.
Deposit date:2014-04-15
Release date:2014-11-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A sialic Acid binding site in a human picornavirus.
Plos Pathog., 10, 2014
7B6S
DownloadVisualize
BU of 7b6s by Molmil
Sheep Polyomavirus VP1 in complex with 10 mM Forssman antigen pentaose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Rustmeier, N.H, Stehle, T.
Deposit date:2020-12-08
Release date:2022-09-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:A novel and highly specific Forssman antigen-binding protein from sheep polyomavirus
Biorxiv, 2023
7B6U
DownloadVisualize
BU of 7b6u by Molmil
Sheep Polyomavirus VP1 in complex with 5 mM Forssman antigen pentaose and 20 mM 6'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, Capsid protein VP1, ...
Authors:Rustmeier, N.H, Stehle, T.
Deposit date:2020-12-08
Release date:2022-09-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:A novel and highly specific Forssman antigen-binding protein from sheep polyomavirus
Biorxiv, 2023
7B6T
DownloadVisualize
BU of 7b6t by Molmil
Sheep Polyomavirus VP1 in complex with 10 mM globo-N-tetraose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose, ...
Authors:Rustmeier, N.H, Stehle, T.
Deposit date:2020-12-08
Release date:2022-09-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:A novel and highly specific Forssman antigen-binding protein from sheep polyomavirus
Biorxiv, 2023
7B6V
DownloadVisualize
BU of 7b6v by Molmil
Sheep Polyomavirus VP1 in complex with 5 mM Forssman antigen pentaose and 20 mM 3'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Rustmeier, N.H, Stehle, T.
Deposit date:2020-12-08
Release date:2022-09-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:A novel and highly specific Forssman antigen-binding protein from sheep polyomavirus
Biorxiv, 2023
4POT
DownloadVisualize
BU of 4pot by Molmil
Structure of Human Polyomavirus 9 VP1 pentamer in complex with N-glycolylneuraminic acid containing 3'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, ISOPROPYL ALCOHOL, ...
Authors:Khan, Z.M, Stehle, T.
Deposit date:2014-02-26
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate.
J.Virol., 88, 2014
4U62
DownloadVisualize
BU of 4u62 by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with 3'-sialyllactose
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-acetyl-alpha-neuraminic acid, ...
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4MBY
DownloadVisualize
BU of 4mby by Molmil
Structure of B-Lymphotropic Polyomavirus VP1 in complex with 3'-sialyllactose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Khan, Z.M, Neu, U, Stehle, T.
Deposit date:2013-08-21
Release date:2013-12-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands.
Plos Pathog., 9, 2013
4POQ
DownloadVisualize
BU of 4poq by Molmil
Structure of unliganded VP1 pentamer of Human Polyomavirus 9
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, ISOPROPYL ALCOHOL, ...
Authors:Khan, Z.M, Stehle, T.
Deposit date:2014-02-26
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate.
J.Virol., 88, 2014
4U60
DownloadVisualize
BU of 4u60 by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with GM1 oligosaccharide
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-acetyl-alpha-neuraminic acid, ...
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4U5Z
DownloadVisualize
BU of 4u5z by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1
Descriptor: Structural protein VP1
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4U61
DownloadVisualize
BU of 4u61 by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with 6'-sialyllactose
Descriptor: GLYCEROL, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4POS
DownloadVisualize
BU of 4pos by Molmil
Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, ISOPROPYL ALCOHOL, ...
Authors:Khan, Z.M, Stehle, T.
Deposit date:2014-02-26
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate.
J.Virol., 88, 2014

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon