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3NPD
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BU of 3npd by Molmil
Crystal structure of a putative secreted protein (PA3611) from PSEUDOMONAS AERUGINOSA at 1.60 A resolution
Descriptor: 1,2-ETHANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-28
Release date:2010-07-28
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a putative quorum sensing-regulated protein (PA3611) from the Pseudomonas-specific DUF4146 family.
Proteins, 82, 2014
3O0F
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BU of 3o0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-07-19
Release date:2010-08-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
3M82
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BU of 3m82 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.40 A resolution (PMSF inhibitor complex structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-05-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3MSW
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BU of 3msw by Molmil
Crystal structure of a Protein with unknown function (BF3112) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
Descriptor: CHLORIDE ION, R-1,2-PROPANEDIOL, uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-04-29
Release date:2010-06-09
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of single-layer beta-sheet proteins evolved from beta-hairpin repeats.
Protein Sci., 28, 2019
3M81
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BU of 3m81 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.50 A resolution (native apo structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-04-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3M83
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BU of 3m83 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.12 A resolution (paraoxon inhibitor complex structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-05-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3NL9
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BU of 3nl9 by Molmil
Crystal structure of a putative NTP pyrophosphohydrolase (Exig_1061) from EXIGUOBACTERIUM SP. 255-15 at 1.78 A resolution
Descriptor: 1,2-ETHANEDIOL, putative NTP pyrophosphohydrolase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-21
Release date:2010-07-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15.
Acta Crystallogr.,Sect.F, 66, 2010
3OHG
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BU of 3ohg by Molmil
Crystal structure of a protein with unknown function from DUF2233 family (BACOVA_00430) from Bacteroides ovatus at 1.80 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-08-17
Release date:2010-09-08
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function of the DUF2233 domain in bacteria and in the human mannose 6-phosphate uncovering enzyme.
J.Biol.Chem., 288, 2013
3OYV
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BU of 3oyv by Molmil
Crystal structure of an imelysin peptidase (BACOVA_03801) from Bacteroides ovatus ATCC 8483 at 1.25 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Imelysin, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-09-23
Release date:2010-10-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural and sequence analysis of imelysin-like proteins implicated in bacterial iron uptake.
Plos One, 6, 2011
3N8U
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BU of 3n8u by Molmil
Crystal structure of an imelysin peptidase (BACOVA_03801) from Bacteroides ovatus at 1.44 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-05-28
Release date:2010-07-28
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural and sequence analysis of imelysin-like proteins implicated in bacterial iron uptake.
Plos One, 6, 2011
3OZ2
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BU of 3oz2 by Molmil
Crystal structure of a geranylgeranyl bacteriochlorophyll reductase-like (Ta0516) from Thermoplasma acidophilum at 1.60 A resolution
Descriptor: (2R)-3-{[(R)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-2-[(6Z)-tridec-6-enoyloxy]propyl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, Digeranylgeranylglycerophospholipid reductase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-09-24
Release date:2010-10-27
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Insights into substrate specificity of geranylgeranyl reductases revealed by the structure of digeranylgeranylglycerophospholipid reductase, an essential enzyme in the biosynthesis of archaeal membrane lipids.
J.Mol.Biol., 404, 2010
3PAY
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BU of 3pay by Molmil
Crystal structure of a putative adhesin (BACOVA_04077) from Bacteroides ovatus at 2.50 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, putative adhesin
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-10-19
Release date:2010-11-10
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
8D0Z
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BU of 8d0z by Molmil
S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S728-1157 Fab heavy chain variable region, S728-1157 Fab light chain variable region, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2022-05-26
Release date:2023-03-22
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Site of vulnerability on SARS-CoV-2 spike induces broadly protective antibody against antigenically distinct Omicron subvariants.
J.Clin.Invest., 133, 2023
5CAG
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BU of 5cag by Molmil
Crystal structure of a putative adhesin (BACOVA_02677) from Bacteroides ovatus ATCC 8483 at 3.00 A resolution (PSI Community Target, Nakayama)
Descriptor: SULFATE ION, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG), Nakayama, K.
Deposit date:2015-06-29
Release date:2015-10-14
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
5CXT
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BU of 5cxt by Molmil
Crystal structure of a RNA-binding protein 39 (RBM39) in complex with fragment of splicing factor (U2AF) from Unknown at 2.20 A resolution
Descriptor: RNA-binding protein 39, Splicing factor U2AF 65 kDa subunit
Authors:Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Deposit date:2015-07-29
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex.
Acta Crystallogr D Struct Biol, 72, 2016
2F58
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BU of 2f58 by Molmil
IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 12-RESIDUE CYCLIC PEPTIDE (INCLUDING RESIDUES 315-324 OF HIV-1 GP120) (MN ISOLATE)
Descriptor: 1-IMINO-5-PENTANONE, PROTEIN (HIV-1 GP120), PROTEIN (IGG1 FAB 58.2 ANTIBODY (HEAVY CHAIN)), ...
Authors:Stanfield, R.L, Cabezas, E, Satterthwait, A.C, Stura, E.A, Profy, A.T, Wilson, I.A.
Deposit date:1998-10-23
Release date:1999-02-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs.
Structure Fold.Des., 7, 1999
4MC7
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BU of 4mc7 by Molmil
Crystal structure of a subtype N11 neuraminidase-like protein of A/flat-faced bat/Peru/033/2010 (H18N11)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NEURAMINIDASE
Authors:Yang, H, Carney, P.J, Chang, J.C, Guo, Z, Stevens, J.
Deposit date:2013-08-21
Release date:2013-10-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:New world bats harbor diverse influenza a viruses.
Plos Pathog., 9, 2013
4K4K
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BU of 4k4k by Molmil
Crystal structure of a putative cell adhesion protein (BACUNI_00621) from Bacteroides uniformis ATCC 8492 at 1.67 A resolution
Descriptor: CHLORIDE ION, Putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-04-12
Release date:2013-05-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4MC5
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BU of 4mc5 by Molmil
Crystal structure of a subtype H18 hemagglutinin homologue from A/flat-faced bat/Peru/033/2010 (H18N11)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Yang, H, Carney, P.J, Chang, J.C, Guo, Z, Stevens, J.
Deposit date:2013-08-21
Release date:2013-10-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.238 Å)
Cite:New world bats harbor diverse influenza a viruses.
Plos Pathog., 9, 2013
1YPI
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BU of 1ypi by Molmil
STRUCTURE OF YEAST TRIOSEPHOSPHATE ISOMERASE AT 1.9-ANGSTROMS RESOLUTION
Descriptor: TRIOSEPHOSPHATE ISOMERASE
Authors:Alber, T, Lolis, E, Petsko, G.A.
Deposit date:1990-01-12
Release date:1991-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of yeast triosephosphate isomerase at 1.9-A resolution.
Biochemistry, 29, 1990
8EQN
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BU of 8eqn by Molmil
BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core
Descriptor: BG505 UFO-E2p-L4P
Authors:Antanasijevic, A, Zhang, Y.N, Zhu, J, Ward, A.B.
Deposit date:2022-10-08
Release date:2023-04-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Single-component multilayered self-assembling protein nanoparticles presenting glycan-trimmed uncleaved prefusion optimized envelope trimmers as HIV-1 vaccine candidates.
Nat Commun, 14, 2023
4OD1
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BU of 4od1 by Molmil
Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody
Descriptor: CAP256-VRC26.03 heavy chain, CAP256-VRC26.03 light chain
Authors:Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
Deposit date:2014-01-09
Release date:2014-02-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
4OCR
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BU of 4ocr by Molmil
Crystal structure of human Fab CAP256-VRC26.01, a potent V1V2-directed HIV-1 neutralizing antibody
Descriptor: CAP256-VRC26.01 heavy chain, CAP256-VRC26.01 light chain
Authors:Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
Deposit date:2014-01-09
Release date:2014-02-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
4QDG
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BU of 4qdg by Molmil
Crystal structure of a putative adhesin (BT2657) from Bacteroides thetaiotaomicron VPI-5482 at 2.20 A resolution (PSI Community Target, Nakayama)
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Putative adhesin
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-05-13
Release date:2014-06-11
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4Q5K
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BU of 4q5k by Molmil
Crystal structure of a N-acetylmuramoyl-L-alanine amidase (BACUNI_02947) from Bacteroides uniformis ATCC 8492 at 1.30 A resolution
Descriptor: (2R)-2-[[(1R,2S,3R,4R,5R)-4-acetamido-2-[(2S,3R,4R,5S,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-6,8-dioxabicyclo[3.2.1]octan-3-yl]oxy]propanoic acid, SODIUM ION, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-04-17
Release date:2014-05-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-guided functional characterization of DUF1460 reveals a highly specific NlpC/P60 amidase family.
Structure, 22, 2014

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