Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3G6N
DownloadVisualize
BU of 3g6n by Molmil
Crystal structure of an EfPDF complex with Met-Ala-Ser
Descriptor: FE (III) ION, Peptide deformylase, SODIUM ION, ...
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-02-07
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an EfPDF complex with Met-Ala-Ser based on crystallographic packing.
Biochem.Biophys.Res.Commun., 381, 2009
3K6K
DownloadVisualize
BU of 3k6k by Molmil
Crystal structure at 2.2 angstrom of HSL-homolog EstE7 from a metagenome library
Descriptor: BETA-MERCAPTOETHANOL, Esterase/lipase, SULFATE ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-10-09
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural analysis of hormone-sensitive lipase homolog EstE7; Insight into the stabilized dimerization of HSL-homolog proteins
to be published
3H17
DownloadVisualize
BU of 3h17 by Molmil
Crystal structure of EstE5-PMSF (I)
Descriptor: Esterase/lipase, phenylmethanesulfonic acid
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-04-11
Release date:2009-04-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of an HSL-homolog EstE5 complex with PMSF reveals a unique configuration that inhibits the nucleophile Ser144 in catalytic triads.
Biochem.Biophys.Res.Commun., 389, 2009
3H18
DownloadVisualize
BU of 3h18 by Molmil
Crystal structure of EstE5-PMSF (II)
Descriptor: Esterase/lipase, phenylmethanesulfonic acid
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-04-11
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of an HSL-homolog EstE5 complex with PMSF reveals a unique configuration that inhibits the nucleophile Ser144 in catalytic triads.
Biochem.Biophys.Res.Commun., 389, 2009
3CMD
DownloadVisualize
BU of 3cmd by Molmil
Crystal structure of peptide deformylase from VRE-E.faecium
Descriptor: FE (III) ION, MALONATE ION, Peptide deformylase, ...
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-03-21
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insight into the antibacterial drug design and architectural mechanism of peptide recognition from the E. faecium peptide deformylase structure.
Proteins, 74, 2009
3CMJ
DownloadVisualize
BU of 3cmj by Molmil
Crystal Structure of engineered Beta-Glucosidase from Soil metagenome
Descriptor: Beta-glucosidase, S,R MESO-TARTARIC ACID, SODIUM ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-03-22
Release date:2008-10-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of engineered beta-glucosidase from a soil metagenome.
Proteins, 73, 2008
3FAK
DownloadVisualize
BU of 3fak by Molmil
Structural and Functional Analysis of a Hormone-Sensitive Lipase like EstE5 from a Metagenome Library
Descriptor: CHLORIDE ION, Esterase/lipase, SODIUM ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-11-17
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional analysis of a novel EstE5 belonging to the subfamily of hormone-sensitive lipase
Biochem.Biophys.Res.Commun., 379, 2009
3DNM
DownloadVisualize
BU of 3dnm by Molmil
Crystal Structure Hormone-Sensitive Lipase from a Metagenome Library
Descriptor: BETA-MERCAPTOETHANOL, Esterase/lipase, SULFATE ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-07-02
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional analysis of a novel hormone-sensitive lipase from a metagenome library
Proteins, 74, 2008
3GVY
DownloadVisualize
BU of 3gvy by Molmil
Crystal structure of bacterioferritin from R.sphaeroides
Descriptor: Bacterioferritin, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-03-31
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of bacterioferritin from Rhodobacter sphaeroides
Biochem.Biophys.Res.Commun., 391, 2010
3FW6
DownloadVisualize
BU of 3fw6 by Molmil
Crystal structure of CelM2, a bifunctional glucanase-xylanase protein from a metagenome library
Descriptor: Cellulase, ZINC ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-01-17
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CelM2, a bifunctional glucanase-xylanase protein from a metagenome library
Biochem.Biophys.Res.Commun., 383, 2009
8IH0
DownloadVisualize
BU of 8ih0 by Molmil
Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
8IH1
DownloadVisualize
BU of 8ih1 by Molmil
Room temperature structure of GH11 from Thermoanaerobacterium saccharolyticum by serial crystallography
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
8WDG
DownloadVisualize
BU of 8wdg by Molmil
Subatomic crystal structure of glucose isomerase from Streptomyces rubiginosus
Descriptor: MAGNESIUM ION, Xylitol, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2023-09-15
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Xylitol binding to the M1 site of glucose isomerase induces a conformational change in the substrate binding channel.
Biochem.Biophys.Res.Commun., 682, 2023
6IG6
DownloadVisualize
BU of 6ig6 by Molmil
Crystal structure of lysozyme delivered in polyacrylamide using x-ray free electron laser
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2018-09-25
Release date:2018-11-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Polyacrylamide injection matrix for serial femtosecond crystallography.
Sci Rep, 9, 2019
6IRJ
DownloadVisualize
BU of 6irj by Molmil
Crystal structure of lysozyme by fixed-target serial femtosecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2018-11-13
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nylon mesh-based sample holder for fixed-target serial femtosecond crystallography.
Sci Rep, 9, 2019
6IG7
DownloadVisualize
BU of 6ig7 by Molmil
Crystal structure of thermolysin delivered in polyacrylamide using x-ray free electron laser
Descriptor: CALCIUM ION, LEUCINE, LYSINE, ...
Authors:Nam, K.H.
Deposit date:2018-09-25
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Polyacrylamide injection matrix for serial femtosecond crystallography.
Sci Rep, 9, 2019
6JXQ
DownloadVisualize
BU of 6jxq by Molmil
Room temperature structure of lysozyme delivered in polyacrylamide by serial millisecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Nam, K.H.
Deposit date:2019-04-24
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Sample delivery using viscous media, a syringe and a syringe pump for serial crystallography.
J.Synchrotron Radiat., 26, 2019
6JXP
DownloadVisualize
BU of 6jxp by Molmil
Room temperature structure of lysozyme delivered in LCP by serial millisecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Nam, K.H.
Deposit date:2019-04-24
Release date:2019-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Sample delivery using viscous media, a syringe and a syringe pump for serial crystallography.
J.Synchrotron Radiat., 26, 2019
6IRK
DownloadVisualize
BU of 6irk by Molmil
Crystal structure of glucose isomerase by fixed-target serial femtosecond crystallography
Descriptor: MAGNESIUM ION, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2018-11-13
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Nylon mesh-based sample holder for fixed-target serial femtosecond crystallography.
Sci Rep, 9, 2019
7WKR
DownloadVisualize
BU of 7wkr by Molmil
Room temperature structure of lysozyme solved by serial synchrotron crystallography
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Nam, K.H.
Deposit date:2022-01-11
Release date:2022-02-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Combination of an inject-and-transfer system for serial femtosecond crystallography.
J.Appl.Crystallogr., 55, 2022
7WUC
DownloadVisualize
BU of 7wuc by Molmil
Room-temperature structure of lysozyme by serial femtosecond crystallography (BITS)
Descriptor: Lysozyme C
Authors:Nam, K.H.
Deposit date:2022-02-08
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Combination of an inject-and-transfer system for serial femtosecond crystallography.
J.Appl.Crystallogr., 55, 2022
4HZ8
DownloadVisualize
BU of 4hz8 by Molmil
Crystal structure of BglB with natural substrate
Descriptor: Beta-glucosidase, beta-D-glucopyranose
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2012-11-14
Release date:2012-12-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural insights into the substrate recognition properties of beta-glucosidase.
Biochem.Biophys.Res.Commun., 391, 2010
4HZ7
DownloadVisualize
BU of 4hz7 by Molmil
Crystal structure of BglB with glucose
Descriptor: beta-D-glucopyranose, beta-glucosidase
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2012-11-14
Release date:2012-12-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the substrate recognition properties of beta-glucosidase.
Biochem.Biophys.Res.Commun., 391, 2010
4HZ6
DownloadVisualize
BU of 4hz6 by Molmil
crystal structure of BglB
Descriptor: Beta-glucosidase, GLYCEROL
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2012-11-14
Release date:2012-12-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insights into the substrate recognition properties of beta-glucosidase.
Biochem.Biophys.Res.Commun., 391, 2010
4ES1
DownloadVisualize
BU of 4es1 by Molmil
Double-stranded Endonuclease Activity in B. halodurans Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated Cas2 Protein
Descriptor: BH0342 protein
Authors:Ke, A, Nam, K.H.
Deposit date:2012-04-21
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein.
J. Biol. Chem., 287, 2012

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon