Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6U8I
DownloadVisualize
BU of 6u8i by Molmil
BRD4-BD2 in complex with the cyclic peptide 3.2_2
Descriptor: AMINO GROUP, Bromodomain-containing protein 4, cyclic peptide 3.2_2
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-09-05
Release date:2020-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ULV
DownloadVisualize
BU of 6ulv by Molmil
BRD4-BD1 in complex with the cyclic peptide 4.2_1
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bromodomain-containing protein 4, Cyclic peptide 4.2_3, ...
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-10-08
Release date:2020-12-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ULT
DownloadVisualize
BU of 6ult by Molmil
BRD2-BD2 in complex with the cyclic peptide 4.2_3
Descriptor: Bromodomain-containing protein 2, Cyclic peptide 4.2_3
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-10-08
Release date:2021-02-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
2KZH
DownloadVisualize
BU of 2kzh by Molmil
Three-dimensional structure of a truncated phosphoribosylanthranilate isomerase (residues 255-384) from Escherichia coli
Descriptor: Tryptophan biosynthesis protein trpCF
Authors:Setiyaputra, S, Mackay, J.P, Patrick, W.M.
Deposit date:2010-06-17
Release date:2011-03-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of a Truncated Phosphoribosylanthranilate Isomerase Suggests a Unified Model for Evolution of the (beta alpha)8 Barrel Fold
J.Mol.Biol., 408, 2011
2L6Y
DownloadVisualize
BU of 2l6y by Molmil
haddock model of GATA1NF:Lmo2LIM2-Ldb1LID
Descriptor: Erythroid transcription factor, LIM domain only 2, linker, ...
Authors:Wilkinson-White, L, Gamsjaeger, R, Dastmalchi, S, Wienert, B, Stokes, P.H, Crossley, M, Mackay, J.P, Matthews, J.M.
Deposit date:2010-12-01
Release date:2011-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of simultaneous recruitment of the transcriptional regulators LMO2 and FOG1/ZFPM1 by the transcription factor GATA1
Proc.Natl.Acad.Sci.USA, 108, 2011
2L75
DownloadVisualize
BU of 2l75 by Molmil
Solution structure of CHD4-PHD2 in complex with H3K9me3
Descriptor: 14-meric peptide from 1Histone H3.1, Chromodomain-helicase-DNA-binding protein 4, ZINC ION
Authors:Mansfield, R.E, Kwan, A.H, Mackay, J.P.
Deposit date:2010-12-02
Release date:2011-01-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Plant Homeodomain (PHD) Fingers of CHD4 Are Histone H3-binding Modules with Preference for Unmodified H3K4 and Methylated H3K9
J.Biol.Chem., 286, 2011
2K1P
DownloadVisualize
BU of 2k1p by Molmil
Solution structure of the second zinc finger domain of ZRANB2/ZNF265
Descriptor: ZINC ION, Zinc finger Ran-binding domain-containing protein 2
Authors:Loughlin, F.E, Mackay, J.P.
Deposit date:2008-03-13
Release date:2009-03-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The zinc fingers of the SR-proein ZRANB2 recognize 5'splice site-like sequences and constitute a distinct class of RNA binding domain
To be Published
2JYD
DownloadVisualize
BU of 2jyd by Molmil
Structure of the fifth zinc finger of Myelin Transcription Factor 1
Descriptor: F5 domain of Myelin transcription factor 1, ZINC ION
Authors:Gamsjaeger, R, Swanton, M.K, Kobus, F.J, Lehtomaki, E, Lowry, J.A, Kwan, A.H, Matthews, J.M, Mackay, J.P.
Deposit date:2007-12-12
Release date:2008-01-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural and biophysical analysis of the DNA binding properties of myelin transcription factor 1.
J.Biol.Chem., 283, 2008
2JM3
DownloadVisualize
BU of 2jm3 by Molmil
Solution structure of the THAP domain from C. elegans C-terminal binding protein (CtBP)
Descriptor: Hypothetical protein, ZINC ION
Authors:Liew, C.K, Crossley, M, Mackay, J.P, Nicholas, H.R.
Deposit date:2006-09-21
Release date:2007-02-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the THAP domain from Caenorhabditis elegans C-terminal binding protein (CtBP).
J.Mol.Biol., 366, 2007
2JTN
DownloadVisualize
BU of 2jtn by Molmil
NMR Solution Structure of a ldb1-LID:Lhx3-LIM complex
Descriptor: LIM domain-binding protein 1, LIM/homeobox protein Lhx3, ZINC ION
Authors:Lee, C, Nancarrow, A.L, Mackay, J.P, Matthews, J.M.
Deposit date:2007-08-03
Release date:2008-06-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Implementing the LIM code: the structural basis for cell type-specific assembly of LIM-homeodomain complexes
Embo J., 27, 2008
2JX1
DownloadVisualize
BU of 2jx1 by Molmil
Structure of the fifth zinc finger of Myelin Transcription Factor 1 in complex with RARE DNA
Descriptor: DNA (5'-D(*DAP*DCP*DCP*DGP*DAP*DAP*DAP*DGP*DTP*DTP*DCP*DAP*DC)-3'), DNA (5'-D(*DGP*DTP*DGP*DAP*DAP*DCP*DTP*DTP*DTP*DCP*DGP*DGP*DT)-3'), Myelin transcription factor 1
Authors:Gamsjaeger, R, Swanton, M.K, Kobus, F.J, Lehtomaki, E, Lowry, J.A, Kwan, A.H, Matthews, J.M, Mackay, J.P.
Deposit date:2007-11-01
Release date:2007-12-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the fifth zinc finger of Myelin Transcription Factor 1 in complex with RARE DNA
To be Published
2MF8
DownloadVisualize
BU of 2mf8 by Molmil
HADDOCK model of MyT1 F4F5 - DNA complex
Descriptor: DNA (5'-D(*AP*CP*CP*GP*AP*AP*AP*GP*TP*TP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*AP*AP*CP*TP*TP*TP*CP*GP*GP*T)-3'), Myelin transcription factor 1, ...
Authors:Gamsjaeger, R, O'Connell, M.R, Cubeddu, L, Shepherd, N.E, Lowry, J.A, Kwan, A.H, Vandevenne, M, Swanton, M.K, Matthews, J.M, Mackay, J.P.
Deposit date:2013-10-08
Release date:2013-11-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A structural analysis of DNA binding by myelin transcription factor 1 double zinc fingers.
J.Biol.Chem., 288, 2013
2L6Z
DownloadVisualize
BU of 2l6z by Molmil
haddock model of GATA1NF:Lmo2LIM2-Ldb1LID with FOG
Descriptor: Erythroid transcription factor, LIM domain only 2, linker, ...
Authors:Wilkinson-White, L, Gamsjaeger, R, Dastmalchi, S, Wienert, B, Stokes, P.H, Crossley, M, Mackay, J.P, Matthews, J.M.
Deposit date:2010-12-01
Release date:2011-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of simultaneous recruitment of the transcriptional regulators LMO2 and FOG1/ZFPM1 by the transcription factor GATA1
Proc.Natl.Acad.Sci.USA, 108, 2011
2LFN
DownloadVisualize
BU of 2lfn by Molmil
Identification of the key regions that drive functional amyloid formation by the fungal hydrophobin EAS
Descriptor: Hydrophobin
Authors:Macindoe, I, Kwan, A.H, Morris, V.K, Mackay, J.P, Sunde, M.
Deposit date:2011-07-06
Release date:2012-01-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Self-assembly of functional, amphipathic amyloid monolayers by the fungal hydrophobin EAS
Proc.Natl.Acad.Sci.USA, 109, 2012
2L5E
DownloadVisualize
BU of 2l5e by Molmil
Complex between BD1 of Brd3 and GATA-1 C-tail
Descriptor: Bromodomain-containing protein 3, GATA-1
Authors:Gamsjaeger, R, Webb, S.R, Lamonica, J.M, Blobel, G.A, Mackay, J.P.
Deposit date:2010-10-31
Release date:2011-05-18
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural basis and specificity of acetylated transcription factor GATA1 recognition by BET family bromodomain protein Brd3.
Mol. Cell. Biol., 31, 2011
2L5U
DownloadVisualize
BU of 2l5u by Molmil
Structure of the first PHD finger (PHD1) from CHD4 (Mi2b)
Descriptor: Chromodomain-helicase-DNA-binding protein 4, ZINC ION
Authors:Mansfield, R.E, Kwan, A.H, Mackay, J.P.
Deposit date:2010-11-08
Release date:2011-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Plant Homeodomain (PHD) Fingers of CHD4 Are Histone H3-binding Modules with Preference for Unmodified H3K4 and Methylated H3K9
J.Biol.Chem., 286, 2011
2N39
DownloadVisualize
BU of 2n39 by Molmil
NMR solution structure of a C-terminal domain of the chromodomain helicase DNA-binding protein 1
Descriptor: Chromodomain-helicase-DNA-binding protein 1
Authors:Mohanty, B, Silva, A.P.G, Mackay, J.P, Ryan, D.P.
Deposit date:2015-05-26
Release date:2016-06-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Chromatin Remodelling Protein CHD1 Contains a Previously Unrecognised C-Terminal Helical Domain.
J. Mol. Biol., 428, 2016
2KAE
DownloadVisualize
BU of 2kae by Molmil
data-driven model of MED1:DNA complex
Descriptor: 5'-D(*DCP*DGP*DGP*DAP*DAP*DAP*DAP*DGP*DTP*DAP*DTP*DAP*DCP*DTP*DTP*DTP*DTP*DCP*DCP*DG)-3', GATA-type transcription factor, ZINC ION
Authors:Lowry, J.A, Gamsjaeger, R, Thong, S, Hung, W, Kwan, A.H, Broitman-Maduro, G, Matthews, J.M, Maduro, M, Mackay, J.P.
Deposit date:2008-11-04
Release date:2009-01-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Analysis of MED-1 Reveals Unexpected Diversity in the Mechanism of DNA Recognition by GATA-type Zinc Finger Domains.
J.Biol.Chem., 284, 2009
2MBV
DownloadVisualize
BU of 2mbv by Molmil
LMO4-LIM2 in complex with DEAF1 (404-418)
Descriptor: Fusion protein of LIM domain transcription factor LMO4 (77-147) and DEAF1 (404-418), ZINC ION
Authors:Joseph, S, Matthews, J.M, Kwan, A.H.-Y, Mackay, J.P, Cubeddu, L, Foo, P.
Deposit date:2013-08-06
Release date:2014-08-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural characterisation of LIM-only protein 4 (LMO4) in complex with Deformed Epidermal Autoregulatory Factor-1 (DEAF1)
To be Published
2N5N
DownloadVisualize
BU of 2n5n by Molmil
Structure of an N-terminal domain of CHD4
Descriptor: Chromodomain-helicase-DNA-binding protein 4
Authors:Silva, A.P.G, Mackay, J.P.
Deposit date:2015-07-22
Release date:2015-11-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The N-terminal Region of Chromodomain Helicase DNA-binding Protein 4 (CHD4) Is Essential for Activity and Contains a High Mobility Group (HMG) Box-like-domain That Can Bind Poly(ADP-ribose).
J.Biol.Chem., 291, 2016
4IJ2
DownloadVisualize
BU of 4ij2 by Molmil
Human methemoglobin in complex with the second and third NEAT domains of IsdH from Staphylococcus aureus
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated surface determinant protein H, ...
Authors:Dickson, C.F, Jacques, D.A, Guss, J.M, Gell, D.A.
Deposit date:2012-12-21
Release date:2013-12-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.24 Å)
Cite:Structure of the Hemoglobin-IsdH Complex Reveals the Molecular Basis of Iron Capture by Staphylococcus aureus
J.Biol.Chem., 289, 2014
1JUN
DownloadVisualize
BU of 1jun by Molmil
NMR STUDY OF C-JUN HOMODIMER
Descriptor: C-JUN HOMODIMER
Authors:Junius, F.K, O'Donoghue, S.I, Nilges, M, King, G.F.
Deposit date:1995-12-19
Release date:1996-06-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:High resolution NMR solution structure of the leucine zipper domain of the c-Jun homodimer.
J.Biol.Chem., 271, 1996
5VJJ
DownloadVisualize
BU of 5vjj by Molmil
Crystal structure of the flax-rust effector AvrP
Descriptor: Avirulence protein AvrP123, ZINC ION
Authors:Zhang, X, Ericsson, D.J, Williams, S.J, Kobe, B.
Deposit date:2017-04-19
Release date:2017-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of the Melampsora lini effector AvrP reveals insights into a possible nuclear function and recognition by the flax disease resistance protein P.
Mol. Plant Pathol., 19, 2018
3SZK
DownloadVisualize
BU of 3szk by Molmil
Crystal Structure of Human metHaemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated surface determinant protein H, ...
Authors:Jacques, D.A, Kumar, K.K, Guss, J.M, Gell, D.A.
Deposit date:2011-07-19
Release date:2011-09-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural basis for hemoglobin capture by Staphylococcus aureus cell-surface protein, IsdH
J.Biol.Chem., 286, 2011
2FMC
DownloadVisualize
BU of 2fmc by Molmil
Solution structure of the class I hydrophobin EAS
Descriptor: Hydrophobin
Authors:Kwan, A.H.
Deposit date:2006-01-09
Release date:2006-03-28
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural basis for rodlet assembly in fungal hydrophobins
Proc.Natl.Acad.Sci.Usa, 103, 2006

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon