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3AW5
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BU of 3aw5 by Molmil
Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum
Descriptor: ACETATE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Sakuraba, H, Ohshima, T, Yoneda, K.
Deposit date:2011-03-10
Release date:2011-06-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum
Acta Crystallogr.,Sect.F, 67, 2011
3AXB
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BU of 3axb by Molmil
Structure of a dye-linked L-proline dehydrogenase from the aerobic hyperthermophilic archaeon, Aeropyrum pernix
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, PROLINE, ...
Authors:Sakuraba, H, Ohshima, T, Satomura, T, Yoneda, K, Hara, Y.
Deposit date:2011-04-01
Release date:2012-04-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal Structure of Novel Dye-linked L-Proline Dehydrogenase from Hyperthermophilic Archaeon Aeropyrum pernix
J.Biol.Chem., 287, 2012
2ZPO
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BU of 2zpo by Molmil
Crystal Structure of Green Turtle Egg White Ribonuclease
Descriptor: GLYCEROL, Ribonuclease, SULFATE ION
Authors:Katekaew, S, Kakuta, Y, Torikata, T, Kimura, M, Yoneda, K, Araki, T.
Deposit date:2008-07-25
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Newly Found Green Turtle Egg White Ribonuclease
To be Published
3AW9
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BU of 3aw9 by Molmil
Structure of UDP-galactose 4-epimerase mutant
Descriptor: GALACTOSE-URIDINE-5'-DIPHOSPHATE, NAD-dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sakuraba, H, Kawai, T, Yoneda, K, Ohshima, T.
Deposit date:2011-03-15
Release date:2012-02-29
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of UDP-galactose 4-epimerase mutant
To be Published
3AZ4
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BU of 3az4 by Molmil
Crystal structure of Co/O-HEWL
Descriptor: CHLORIDE ION, COBALT (II) ION, Lysozyme C
Authors:Abe, S, Tsujimoto, M, Yoneda, K, Ohba, M, Hikage, T, Takano, M, Kitagawa, S, Ueno, T.
Deposit date:2011-05-20
Release date:2012-05-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Porous protein crystals as reaction vessels for controlling magnetic properties of nanoparticles
Small, 8, 2012
3AZ5
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BU of 3az5 by Molmil
Crystal structure of Pt/O-HEWL
Descriptor: Lysozyme C, PLATINUM (II) ION
Authors:Abe, S, Tsujimoto, M, Yoneda, K, Ohba, M, Hikage, T, Takano, M, Kitagawa, S, Ueno, T.
Deposit date:2011-05-20
Release date:2012-05-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Porous protein crystals as reaction vessels for controlling magnetic properties of nanoparticles
Small, 8, 2012
3AZ6
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BU of 3az6 by Molmil
Crystal structure of Co/T-HEWL
Descriptor: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ...
Authors:Abe, S, Tsujimoto, M, Yoneda, K, Ohba, M, Hikage, T, Takano, M, Kitagawa, S, Ueno, T.
Deposit date:2011-05-20
Release date:2012-05-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Porous protein crystals as reaction vessels for controlling magnetic properties of nanoparticles
Small, 8, 2012
3AZ7
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BU of 3az7 by Molmil
Crystal structure of Pt/T-HEWL
Descriptor: Lysozyme C, PLATINUM (II) ION, SODIUM ION
Authors:Abe, S, Tsujimoto, M, Yoneda, K, Ohba, M, Hikage, T, Takano, M, Kitagawa, S, Ueno, T.
Deposit date:2011-05-20
Release date:2012-05-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Porous protein crystals as reaction vessels for controlling magnetic properties of nanoparticles
Small, 8, 2012
8J1C
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BU of 8j1c by Molmil
Structure of amino acid dehydrogenase in complex with NADP
Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, LYSINE, ...
Authors:Sakuraba, H, Ohshima, T.
Deposit date:2023-04-12
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family.
Int.J.Biol.Macromol., 249, 2023
8J1G
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BU of 8j1g by Molmil
Structure of amino acid dehydrogenase in complex with NADPH
Descriptor: 1,2-ETHANEDIOL, ARGININE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sakuraba, H, Ohshima, T.
Deposit date:2023-04-12
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family.
Int.J.Biol.Macromol., 249, 2023
1VCV
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BU of 1vcv by Molmil
Structure of 2-deoxyribose-5-phosphate aldolase from Pyrobaculum aerophilum
Descriptor: Probable deoxyribose-phosphate aldolase, ZINC ION
Authors:Sakuraba, H, Ohshima, T, Tsuge, H.
Deposit date:2004-03-15
Release date:2005-08-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequential aldol condensation catalyzed by hyperthermophilic 2-deoxy-d-ribose-5-phosphate aldolase
Appl.Environ.Microbiol., 73, 2007
1WZU
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BU of 1wzu by Molmil
Crystal structure of quinolinate synthase (nadA)
Descriptor: D-MALATE, Quinolinate synthetase A
Authors:Sakuraba, H.
Deposit date:2005-03-09
Release date:2005-06-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the NAD Biosynthetic Enzyme Quinolinate Synthase
J.Biol.Chem., 280, 2005
4YSV
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BU of 4ysv by Molmil
Structure of aminoacid racemase in apo-form
Descriptor: Putative 4-aminobutyrate aminotransferase
Authors:Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
Deposit date:2015-03-17
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
4YSN
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BU of 4ysn by Molmil
Structure of aminoacid racemase in complex with PLP
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putative 4-aminobutyrate aminotransferase
Authors:Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
Deposit date:2015-03-17
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
5WYA
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BU of 5wya by Molmil
Structure of amino acid racemase, 2.65 A
Descriptor: (2S,3S)-3-methyl-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pentanoic acid, DIMETHYL SULFOXIDE, Isoleucine 2-epimerase
Authors:Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
Deposit date:2017-01-11
Release date:2017-04-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
5WYF
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BU of 5wyf by Molmil
Structure of amino acid racemase, 2.12 A
Descriptor: CADMIUM ION, Isoleucine 2-epimerase, N-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE
Authors:Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
Deposit date:2017-01-12
Release date:2017-04-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
7VNO
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BU of 7vno by Molmil
Structure of aminotransferase
Descriptor: 1,2-ETHANEDIOL, 454aa long hypothetical 4-aminobutyrate aminotransferase, GLYCEROL, ...
Authors:Sakuraba, H, Ohshida, T, Ohshima, T.
Deposit date:2021-10-11
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a novel type of ornithine delta-aminotransferase from the hyperthermophilic archaeon Pyrococcus horikoshii.
Int.J.Biol.Macromol., 208, 2022
7VO1
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BU of 7vo1 by Molmil
Structure of aminotransferase-substrate complex
Descriptor: 454aa long hypothetical 4-aminobutyrate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
Authors:Sakuraba, H, Ohshida, T, Ohshima, T.
Deposit date:2021-10-12
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Crystal structure of a novel type of ornithine delta-aminotransferase from the hyperthermophilic archaeon Pyrococcus horikoshii.
Int.J.Biol.Macromol., 208, 2022
7VNT
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BU of 7vnt by Molmil
Structure of aminotransferase-substrate complex
Descriptor: 1,2-ETHANEDIOL, 454aa long hypothetical 4-aminobutyrate aminotransferase, GLYCEROL, ...
Authors:Sakuraba, H, Ohshida, T, Ohshima, T.
Deposit date:2021-10-12
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of a novel type of ornithine delta-aminotransferase from the hyperthermophilic archaeon Pyrococcus horikoshii.
Int.J.Biol.Macromol., 208, 2022
6K3D
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BU of 6k3d by Molmil
Structure of multicopper oxidase mutant
Descriptor: COPPER (II) ION, CU-O-CU LINKAGE, Multicopper oxidase
Authors:Sakuraba, H, Ohshida, T, Satomura, T, Yoneda, K, Ohshima, T.
Deposit date:2019-05-17
Release date:2020-05-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.919 Å)
Cite:Activity enhancement of multicopper oxidase from a hyperthermophile via directed evolution, and its application as the element of a high performance biocathode.
J.Biotechnol., 325, 2021
2ZVR
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BU of 2zvr by Molmil
Crystal structure of a D-tagatose 3-epimerase-related protein from Thermotoga maritima
Descriptor: Uncharacterized protein TM_0416
Authors:Sakuraba, H, Ohshima, T.
Deposit date:2008-11-14
Release date:2009-03-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a D-tagatose 3-epimerase-related protein from the hyperthermophilic bacterium Thermotoga maritima
Acta Crystallogr.,Sect.F, 65, 2009
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PDB entries from 2024-10-09

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