8TJQ
 
 | |
8TJU
 | | Tetrahymena Ribozyme scaffolded TABV xrRNA | | Descriptor: | DNA/RNA (416-MER), MAGNESIUM ION | | Authors: | Langeberg, C.J, Kieft, J.S. | | Deposit date: | 2023-07-24 | | Release date: | 2023-11-01 | | Last modified: | 2023-11-22 | | Method: | ELECTRON MICROSCOPY (3.46 Å) | | Cite: | A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
|
|
8TJV
 | |
8TJX
 | | Tetrahymena Ribozyme cryo-EM scaffold | | Descriptor: | MAGNESIUM ION, RNA (440-MER) | | Authors: | Langeberg, C.J, Kieft, J.S. | | Deposit date: | 2023-07-24 | | Release date: | 2023-11-01 | | Last modified: | 2023-11-22 | | Method: | ELECTRON MICROSCOPY (2.44 Å) | | Cite: | A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
|
|
6D3P
 | | Crystal structure of an exoribonuclease-resistant RNA from Sweet clover necrotic mosaic virus (SCNMV) | | Descriptor: | IRIDIUM HEXAMMINE ION, RNA (45-MER) | | Authors: | Steckelberg, A.-L, Akiyama, B.M, Costantino, D.A, Sit, T.L, Nix, J.C, Kieft, J.S. | | Deposit date: | 2018-04-16 | | Release date: | 2018-06-20 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
|
|
6DVK
 | | Computationally designed mini tetraloop-tetraloop receptor by the RNAMake program - construct 6 (miniTTR 6) | | Descriptor: | COBALT (II) ION, MAGNESIUM ION, RNA (95-MER) | | Authors: | Eiler, D.R, Yesselman, J.D, Costantino, D.A, Das, R, Kieft, J.S. | | Deposit date: | 2018-06-24 | | Release date: | 2019-06-26 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Computational design of three-dimensional RNA structure and function.
Nat Nanotechnol, 14, 2019
|
|
4P5K
 | | Structural Basis of Chronic Beryllium Disease: Bridging the Gap Between Allergy and Autoimmunity | | Descriptor: | HLA class II histocompatibility antigen, DP alpha 1 chain, RAS peptide,HLA class II histocompatibility antigen, ... | | Authors: | Clayton, G.M, Wang, Y, Crawford, F, Novikov, A, Wimberly, B.T, Kieft, J.S, Falta, M.T, Bowerman, N.A, Marrack, P, Fontenot, A.P, Dai, S, Kappler, J.W. | | Deposit date: | 2014-03-17 | | Release date: | 2015-01-21 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.59 Å) | | Cite: | Structural basis of chronic beryllium disease: linking allergic hypersensitivity and autoimmunity.
Cell, 158, 2014
|
|
2PXD
 | | Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXP
 | | Variant 13 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXL
 | | Variant 9 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXK
 | | Variant 8 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXQ
 | | Variant 14 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXE
 | | Variant 4 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXV
 | | Variant 6 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXT
 | | Variant 15 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXF
 | | Variant 5 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXB
 | | Variant 2 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
2PXU
 | | Variant 16 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | | Descriptor: | 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein | | Authors: | Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S. | | Deposit date: | 2007-05-14 | | Release date: | 2007-08-07 | | Last modified: | 2021-10-20 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
|
|
4XEJ
 | | IRES bound to bacterial Ribosome | | Descriptor: | 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... | | Authors: | Zhu, J, Korostelev, A, Noller, H.F, Donohue, J.P. | | Deposit date: | 2014-12-23 | | Release date: | 2015-02-25 | | Last modified: | 2023-09-27 | | Method: | X-RAY DIFFRACTION (3.8 Å) | | Cite: | Initiation of translation in bacteria by a structured eukaryotic IRES RNA.
Nature, 519, 2015
|
|
6NCU
 | | Interleukin-37 residues 53-206- dimer | | Descriptor: | Interleukin-37 | | Authors: | Eisenmesser, E.Z. | | Deposit date: | 2018-12-12 | | Release date: | 2019-03-13 | | Last modified: | 2024-04-24 | | Method: | X-RAY DIFFRACTION (3.5 Å) | | Cite: | Interleukin-37 monomer is the active form for reducing innate immunity.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
|
|
5LMT
 | | Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3) | | Descriptor: | 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | Authors: | Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. | | Deposit date: | 2016-08-01 | | Release date: | 2016-10-05 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (4.15 Å) | | Cite: | Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
|
|
5LMN
 | | Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1A) | | Descriptor: | 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | Authors: | Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. | | Deposit date: | 2016-08-01 | | Release date: | 2016-10-05 | | Last modified: | 2019-10-02 | | Method: | ELECTRON MICROSCOPY (3.55 Å) | | Cite: | Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
|
|
5LMQ
 | | Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2A) | | Descriptor: | 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | Authors: | Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. | | Deposit date: | 2016-08-01 | | Release date: | 2016-10-05 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (4.2 Å) | | Cite: | Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
|
|
5LMV
 | | Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III) | | Descriptor: | 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | Authors: | Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. | | Deposit date: | 2016-08-01 | | Release date: | 2016-10-05 | | Last modified: | 2019-12-11 | | Method: | ELECTRON MICROSCOPY (4.9 Å) | | Cite: | Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
|
|
5LMO
 | | Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1B) | | Descriptor: | 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... | | Authors: | Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V. | | Deposit date: | 2016-08-01 | | Release date: | 2016-10-05 | | Last modified: | 2019-10-02 | | Method: | ELECTRON MICROSCOPY (4.3 Å) | | Cite: | Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
|
|
