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6YLB
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BU of 6ylb by Molmil
Crystal structure of the SAM-SAH riboswitch with SAM
Descriptor: Chains: A,C,F,I,M,O, Chains: B,D,G,J,N,P, S-ADENOSYLMETHIONINE
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-07
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 2020
6YML
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BU of 6yml by Molmil
Crystal structure of the SAM-SAH riboswitch with decarboxylated SAH
Descriptor: 5'-S-(3-aminopropyl)-5'-thioadenosine, ADENOSINE MONOPHOSPHATE, Chains: A,C, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
6YMK
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BU of 6ymk by Molmil
Crystal structure of the SAM-SAH riboswitch with AMP
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Chains: A,C,F,I,M,O, Chains: B,D,G,J,N,P, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
6YMM
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BU of 6ymm by Molmil
Crystal structure of the SAM-SAH riboswitch with SAM from space group P312
Descriptor: Chains: A, Chains: B,D, S-ADENOSYLMETHIONINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
6YL5
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BU of 6yl5 by Molmil
Crystal structure of the SAM-SAH riboswitch with SAH
Descriptor: Chains: A,B,C,D,E,F,G,H,I,J,K,L, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-06
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 2020
6YMI
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BU of 6ymi by Molmil
Crystal structure of the SAM-SAH riboswitch with AMP.
Descriptor: 5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE), ADENOSINE MONOPHOSPHATE, Chains: A,C,F,I,M,O, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
6TF1
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BU of 6tf1 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine diphosphate (ADP)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-12
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TFF
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BU of 6tff by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide (NAD+)
Descriptor: BROMIDE ION, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-14
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TF0
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BU of 6tf0 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH)
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-12
Release date:2020-09-23
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TF3
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BU of 6tf3 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-13
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TFE
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BU of 6tfe by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)
Descriptor: BROMIDE ION, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-14
Release date:2020-09-23
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TB7
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BU of 6tb7 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine monophosphate (AMP)
Descriptor: ADENOSINE MONOPHOSPHATE, BROMIDE ION, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-01
Release date:2020-09-30
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD + riboswitch.
Rna, 26, 2020
6TF2
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BU of 6tf2 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 5-triphosphate (ATP)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, BROMIDE ION, Chains: A, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-12
Release date:2020-09-23
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
5LQT
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BU of 5lqt by Molmil
RNA duplex has central consecutive GA pairs flanked by G-C basepairs
Descriptor: CALCIUM ION, MAGNESIUM ION, RNA (5'-R(*GP*(CBV)P*CP*GP*GP*(6MZ)P*CP*GP*GP*C)-3'), ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-17
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
6TFG
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BU of 6tfg by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-14
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TFH
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BU of 6tfh by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH); soaking with Manganese(II) (Mn2+)
Descriptor: Chains: A, MANGANESE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-14
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
5LR4
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BU of 5lr4 by Molmil
RNA duplex has central consecutive GA pairs flanked by G-U basepairs with a methyl group on the adenine N6
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*(6MZ)P*UP*GP*GP*C)-3'), SODIUM ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5LQO
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BU of 5lqo by Molmil
RNA duplex has central consecutive GA pairs flanked by G-C basepairs
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*CP*GP*GP*C)-3')
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-17
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5LR3
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BU of 5lr3 by Molmil
RNA duplex has central consecutive GA pairs flanked by G-U basepairs
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*UP*GP*GP*C)-3'), SULFATE ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5LR5
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BU of 5lr5 by Molmil
N6-methyladenine is accommodated in a conventional A-U basepair
Descriptor: RNA (5'-R(*GP*GP*(6MZ)P*CP*UP*AP*GP*UP*(CBV)P*C)-3'), SULFATE ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
4BW0
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BU of 4bw0 by Molmil
The molecular recognition of kink turn structure by the L7Ae class of proteins
Descriptor: 50S RIBOSOMAL PROTEIN L7AE, HMKT-7, SULFATE ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2013-06-29
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The Molecular Recognition of Kink-Turn Structure by the L7Ae Class of Proteins.
RNA, 19, 2013
4C40
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BU of 4c40 by Molmil
The molecular recognition of kink turn structure by the L7Ae class of proteins
Descriptor: 5'-(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP *GP*AP*GP*CP*C)-3'
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2013-08-28
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Molecular Recognition of Kink-Turn Structure by the L7Ae Class of Proteins.
RNA, 19, 2013
4C4W
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BU of 4c4w by Molmil
Structure of a rare, non-standard sequence k-turn bound by L7Ae protein
Descriptor: 50S RIBOSOMAL PROTEIN L7AE, DIHYDROGENPHOSPHATE ION, TSKT-23, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2013-09-09
Release date:2014-02-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a Rare, Non-Standard Sequence K-Turn Bound by L7Ae Protein
Nucleic Acids Res., 42, 2014
5FKF
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BU of 5fkf by Molmil
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UC
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKD
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BU of 5fkd by Molmil
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UA
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016

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PDB entries from 2024-11-06

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