Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3UNY
DownloadVisualize
BU of 3uny by Molmil
Bacillus cereus phosphopentomutase T85E variant soaked with glucose 1,6-bisphosphate
Descriptor: GLYCEROL, MANGANESE (II) ION, Phosphopentomutase
Authors:Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O.
Deposit date:2011-11-16
Release date:2012-02-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase.
Biochemistry, 51, 2012
3UN3
DownloadVisualize
BU of 3un3 by Molmil
phosphopentomutase T85Q variant soaked with glucose 1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, GLYCEROL, MANGANESE (II) ION, ...
Authors:Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O.
Deposit date:2011-11-15
Release date:2012-02-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase.
Biochemistry, 51, 2012
1MBZ
DownloadVisualize
BU of 1mbz by Molmil
BETA-LACTAM SYNTHETASE WITH TRAPPED INTERMEDIATE
Descriptor: ARGININE-N-METHYLCARBONYL PHOSPHORIC ACID 5'-ADENOSINE ESTER, BETA-LACTAM SYNTHETASE, GLYCEROL, ...
Authors:Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2002-08-04
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:The catalytic cycle of beta -lactam synthetase observed by x-ray crystallographic snapshots
Proc.Natl.Acad.Sci.USA, 99, 2002
1M1Z
DownloadVisualize
BU of 1m1z by Molmil
BETA-LACTAM SYNTHETASE APO ENZYME
Descriptor: BETA-LACTAM SYNTHETASE
Authors:Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2002-06-20
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The catalytic cycle of beta -lactam synthetase observed by x-ray crystallographic snapshots
Proc.Natl.Acad.Sci.USA, 99, 2002
1MC1
DownloadVisualize
BU of 1mc1 by Molmil
BETA-LACTAM SYNTHETASE WITH PRODUCT (DGPC), AMP AND PPI
Descriptor: ADENOSINE MONOPHOSPHATE, BETA-LACTAM SYNTHETASE, DEOXYGUANIDINOPROCLAVAMINIC ACID, ...
Authors:Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2002-08-04
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:The catalytic cycle of beta -lactam synthetase observed by x-ray crystallographic snapshots
Proc.Natl.Acad.Sci.USA, 99, 2002
1MB9
DownloadVisualize
BU of 1mb9 by Molmil
BETA-LACTAM SYNTHETASE COMPLEXED WITH ATP
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, BETA-LACTAM SYNTHETASE, ...
Authors:Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2002-08-02
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The catalytic cycle of beta -lactam synthetase observed by x-ray crystallographic snapshots
Proc.Natl.Acad.Sci.USA, 99, 2002
3M8W
DownloadVisualize
BU of 3m8w by Molmil
Phosphopentomutase from Bacillus cereus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, MANGANESE (II) ION, ...
Authors:Panosian, T.D, Nannemann, D.P, Watkins, G, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
Deposit date:2010-03-19
Release date:2010-12-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
3M8Z
DownloadVisualize
BU of 3m8z by Molmil
Phosphopentomutase from Bacillus cereus bound with ribose-5-phosphate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-O-phosphono-alpha-D-ribofuranose, ACETATE ION, ...
Authors:Panosian, T.D, Nannemann, D.P, Watkins, G, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
Deposit date:2010-03-19
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
3M8Y
DownloadVisualize
BU of 3m8y by Molmil
Phosphopentomutase from Bacillus cereus after glucose-1,6-bisphosphate activation
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
Authors:Panosian, T.D, Nannemann, D.P, Watkins, G, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
Deposit date:2010-03-19
Release date:2010-12-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
4XAB
DownloadVisualize
BU of 4xab by Molmil
Crystal Structure of EvdO2 from Micromonospora carbonacea var. aurantiaca
Descriptor: EvdO2, IMIDAZOLE, NICKEL (II) ION
Authors:McCulloch, K.M, McCranie, E.K, Sarwar, M, Mathieu, J.L, Gitschlag, B.L, Du, Y, Bachmann, B.O, Iverson, T.M.
Deposit date:2014-12-13
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XAA
DownloadVisualize
BU of 4xaa by Molmil
Crystal Structure of AviO1 from Streptomyces viridochromogenes Tue57
Descriptor: NICKEL (II) ION, Putative oxygenase
Authors:McCulloch, K.M, McCranie, E.K, Sarwar, M, Mathieu, J.L, Gitschlag, B.L, Du, Y, Bachmann, B.O, Iverson, T.M.
Deposit date:2014-12-13
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XCB
DownloadVisualize
BU of 4xcb by Molmil
Crystal Structure of HygX from Streptomyces hygroscopicus with nickel, 2-oxoglutarate, and hygromycin B bound
Descriptor: 2-OXOGLUTARIC ACID, HYGROMYCIN B VARIANT, NICKEL (II) ION, ...
Authors:McCulloch, K.M, McCranie, E.K, Sarwar, M, Mathieu, J.L, Gitschlag, B.L, Du, Y, Bachmann, B.O, Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XBZ
DownloadVisualize
BU of 4xbz by Molmil
Crystal Structure of EvdO1 from Micromonospora carbonacea var. aurantiaca
Descriptor: EvdO1, GLYCEROL, NICKEL (II) ION
Authors:McCulloch, K.M, McCranie, E.K, Sarwar, M, Mathieu, J.L, Gitschlag, B.L, Du, Y, Bachmann, B.O, Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XC9
DownloadVisualize
BU of 4xc9 by Molmil
Crystal Structure of apo HygX from Streptomyces hygroscopicus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, oxidase/hydroxylase
Authors:McCulloch, K.M, McCranie, E.K, Sarwar, M, Mathieu, J.L, Gitschlag, B.L, Du, Y, Bachmann, B.O, Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZPI
DownloadVisualize
BU of 4zpi by Molmil
Crystal Structure of HygX from Streptomyces hygroscopicus with iron bound
Descriptor: FE (II) ION, Putative oxidase/hydroxylase, SUCCINIC ACID
Authors:McCulloch, K.M, McCranie, E.K, Sarwar, M, Mathieu, J.L, Gitschlag, B.L, Du, Y, Bachmann, B.O, Iverson, T.M.
Deposit date:2015-05-07
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
6EC3
DownloadVisualize
BU of 6ec3 by Molmil
Crystal Structure of EvdMO1
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Methyltransferase domain-containing protein, NICKEL (II) ION
Authors:McCulloch, K.M, Iverson, T.M, Starbird, C.A, Perry, N.A, Chen, Q, Berndt, S, Yamakawa, I, Loukachevitch, L.V.
Deposit date:2018-08-07
Release date:2018-12-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains.
Biochemistry, 57, 2018
5T38
DownloadVisualize
BU of 5t38 by Molmil
Crystal Structure of the N-terminal domain of EvdMO1 with SAH bound
Descriptor: EvdMO1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:McCulloch, K.M, Berndt, S, Yamakawa, I, Chen, Q, Loukachevitch, L.V, Starbird, C, Perry, N.A, Iverson, T.M.
Deposit date:2016-08-25
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.1502 Å)
Cite:The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains.
Biochemistry, 57, 2018
5T39
DownloadVisualize
BU of 5t39 by Molmil
Crystal Structure of the N-terminal domain of EvdMO1 in the presence of SAH and D-fucose
Descriptor: EvdMO1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:McCulloch, K.M, Starbird, C.A, Chen, Q, Perry, N.A, Berndt, S, Yamakawa, I, Loukachevitch, L.V, Iverson, T.M.
Deposit date:2016-08-25
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.1004 Å)
Cite:The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains.
Biochemistry, 57, 2018
7MD2
DownloadVisualize
BU of 7md2 by Molmil
The F1 region of ammocidin-bound Saccharomyces cerevisiae ATP synthase
Descriptor: (3~{E},5~{Z},7~{E},9~{R},10~{S},11~{E},13~{E},15~{E},17~{R},18~{S},20~{S})-20-[(1~{R})-1-[(2~{S},3~{R},4~{R},5~{S},6~{R})-5-[(2~{S},4~{S},5~{S},6~{R})-5-[(2~{S},4~{R},5~{R},6~{R})-4,6-dimethyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-4-oxidanyl-oxan-2-yl]oxy-3-methoxy-6-(3-methoxypropyl)-5-methyl-2,4-bis(oxidanyl)oxan-2-yl]ethyl]-5,18-dimethoxy-3,7,9,11,13,15-hexamethyl-10-[(2~{R},3~{S},4~{R},5~{R},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-17-oxidanyl-1-oxacycloicosa-3,5,7,11,13,15-hexaen-2-one, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2021-04-03
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A Family of Glycosylated Macrolides Selectively Target Energetic Vulnerabilities in Leukemia
Biorxiv, 2021
7MD3
DownloadVisualize
BU of 7md3 by Molmil
The F1 region of apoptolidin-bound Saccharomyces cerevisiae ATP synthase
Descriptor: (3~{E},5~{E},7~{E},9~{R},10~{R},11~{E},13~{E},17~{S},18~{S},20~{S})-18-methoxy-20-[(~{R})-[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(2~{R})-3-methoxy-2-[(2~{R},4~{S},5~{S},6~{S})-5-[(2~{S},4~{R},5~{R},6~{R})-4-methoxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-4,6-dimethyl-4-oxidanyl-oxan-2-yl]oxy-propyl]-3,5-dimethyl-2,4-bis(oxidanyl)oxan-2-yl]-oxidanyl-methyl]-10-[(2~{R},3~{S},4~{S},5~{R},6~{S})-5-methoxy-6-methyl-3,4-bis(oxidanyl)oxan-2-yl]oxy-3,5,7,9,13-pentamethyl-17-oxidanyl-1-oxacycloicosa-3,5,7,11,13-pentaen-2-one, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2021-04-03
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A Family of Glycosylated Macrolides Selectively Target Energetic Vulnerabilities in Leukemia
Biorxiv, 2021
1ZXF
DownloadVisualize
BU of 1zxf by Molmil
Solution structure of a self-sacrificing resistance protein, CalC from Micromonospora echinospora
Descriptor: CalC
Authors:Singh, S, Hager, M.H, Zhang, C, Griffith, B.R, Lee, M.S, Hallenga, K, Markley, J.L, Thorson, J.S, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-06-08
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006
3LGM
DownloadVisualize
BU of 3lgm by Molmil
Crystal structure of reduced IsdI in complex with heme
Descriptor: Heme-degrading monooxygenase isdI, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2010-01-20
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Mol.Microbiol., 75, 2010
3LGN
DownloadVisualize
BU of 3lgn by Molmil
Crystal structure of IsdI in complex with heme
Descriptor: Heme-degrading monooxygenase isdI, MAGNESIUM ION, OXYGEN MOLECULE, ...
Authors:Ukpabi, G.N, Murphy, M.E.P.
Deposit date:2010-01-20
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Mol.Microbiol., 75, 2010
3MXL
DownloadVisualize
BU of 3mxl by Molmil
Crystal structure of nitrososynthase from Micromonospora carbonacea var. africana
Descriptor: Nitrososynthase
Authors:Vey, J.L, Iverson, T.M.
Deposit date:2010-05-07
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structure and mechanism of ORF36, an amino sugar oxidizing enzyme in everninomicin biosynthesis .
Biochemistry, 49, 2010
4ZYJ
DownloadVisualize
BU of 4zyj by Molmil
Streptomyces peucetius nitrososynthase dnmZ in TDP-bound state
Descriptor: DnmZ, THYMIDINE-5'-DIPHOSPHATE
Authors:Sartor, L.M, Vey, J.L.
Deposit date:2015-05-21
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.736 Å)
Cite:Structure of DnmZ, a nitrososynthase in the Streptomyces peucetius anthracycline biosynthetic pathway.
Acta Crystallogr F Struct Biol Commun, 71, 2015

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon